Conservation of cofitness between PS417_18575 and PS417_12310 in Pseudomonas simiae WCS417

56 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_18575 aspartate-semialdehyde dehydrogenase 1.0 PS417_12310 methionine synthase 0.24 1
Pseudomonas fluorescens SBW25-INTG 0.94 PFLU_RS20555 aspartate-semialdehyde dehydrogenase 0.98 PFLU_RS13000 methionine synthase low > 109
Pseudomonas fluorescens SBW25 0.94 PFLU_RS20555 aspartate-semialdehyde dehydrogenase 0.98 PFLU_RS13000 methionine synthase low > 109
Pseudomonas sp. RS175 0.81 PFR28_02819 USG-1 protein 0.95 PFR28_01369 Methionine synthase low > 88
Pseudomonas fluorescens FW300-N2E2 0.81 Pf6N2E2_68 Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) 0.95 Pf6N2E2_2068 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) low > 103
Pseudomonas fluorescens FW300-N2C3 0.80 AO356_21425 aspartate-semialdehyde dehydrogenase 0.96 AO356_00545 methionine synthase low > 104
Pseudomonas fluorescens GW456-L13 0.80 PfGW456L13_3943 Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) 0.96 PfGW456L13_2847 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) low > 87
Pseudomonas fluorescens FW300-N2E3 0.80 AO353_20645 aspartate-semialdehyde dehydrogenase 0.96 AO353_21615 methionine synthase low > 101
Pseudomonas fluorescens FW300-N1B4 0.79 Pf1N1B4_10 Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) 0.96 Pf1N1B4_5661 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) low > 87
Pseudomonas syringae pv. syringae B728a ΔmexB 0.67 Psyr_1660 Aspartate-semialdehyde dehydrogenase 0.92 Psyr_2464 methionine synthase (B12-dependent) low > 86
Pseudomonas syringae pv. syringae B728a 0.67 Psyr_1660 Aspartate-semialdehyde dehydrogenase 0.92 Psyr_2464 methionine synthase (B12-dependent) low > 86
Pseudomonas putida KT2440 0.66 PP_1992 aspartate-semialdehyde dehydrogenase 0.88 PP_2375 cobalamin-dependent methionine synthase low > 96
Pseudomonas sp. S08-1 0.58 OH686_04460 Aspartate-semialdehyde dehydrogenase 0.87 OH686_03335 methionine synthase low > 80
Pseudomonas stutzeri RCH2 0.48 Psest_2587 Aspartate-semialdehyde dehydrogenase 0.87 Psest_2102 5-methyltetrahydrofolate--homocysteine methyltransferase low > 67
Shewanella amazonensis SB2B 0.40 Sama_2152 aspartate-semialdehyde dehydrogenase (RefSeq) 0.62 Sama_0758 metH B12-dependent methionine synthase (RefSeq) — —
Shewanella loihica PV-4 0.40 Shew_2308 aspartate-semialdehyde dehydrogenase (RefSeq) 0.62 Shew_0710 metH B12-dependent methionine synthase (RefSeq) — —
Vibrio cholerae E7946 ATCC 55056 0.39 CSW01_10520 Aspartate-semialdehyde dehydrogenase 2 0.64 CSW01_02060 methionine synthase low > 62
Shewanella oneidensis MR-1 0.39 SO3070 asd aspartate semialdehyde dehydrogenese (NCBI ptt file) 0.62 SO1030 metH 5-methyltetrahydrofolate--homocysteine methyltransferase (NCBI ptt file) — —
Shewanella sp. ANA-3 0.39 Shewana3_1477 aspartate semialdehyde dehydrogenase (RefSeq) 0.62 Shewana3_3282 metH B12-dependent methionine synthase (RefSeq) — —
Kangiella aquimarina DSM 16071 0.37 B158DRAFT_1481 aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) 0.64 B158DRAFT_2466 methionine synthase (B12-dependent) (EC 2.1.1.13) — —
Klebsiella michiganensis M5al 0.34 BWI76_RS20385 aspartate-semialdehyde dehydrogenase 0.65 BWI76_RS01685 methionine synthase low > 92
Serratia liquefaciens MT49 0.34 IAI46_17845 aspartate-semialdehyde dehydrogenase 0.65 IAI46_23155 methionine synthase low > 86
Enterobacter sp. TBS_079 0.34 MPMX20_03254 USG-1 protein 0.65 MPMX20_00235 Methionine synthase low > 85
Dickeya dadantii 3937 0.34 DDA3937_RS14470 aspartate-semialdehyde dehydrogenase 0.65 DDA3937_RS19040 methionine synthase low > 74
Escherichia coli Nissle 1917 0.34 ECOLIN_RS13440 aspartate-semialdehyde dehydrogenase 0.65 ECOLIN_RS23160 methionine synthase low > 52
Escherichia coli ECOR27 0.34 NOLOHH_14300 usg aspartate-semialdehyde dehydrogenase 0.65 NOLOHH_05380 metH methionine synthase — —
Escherichia coli ECOR38 0.34 HEPCGN_21870 usg aspartate-semialdehyde dehydrogenase 0.65 HEPCGN_11885 metH methionine synthase low > 85
Escherichia coli HS(pFamp)R (ATCC 700891) 0.34 OHPLBJKB_01386 USG-1 protein 0.65 OHPLBJKB_04030 Methionine synthase low > 73
Escherichia fergusonii Becca 0.34 EFB2_01539 USG-1 protein 0.65 EFB2_04592 Methionine synthase low > 86
Escherichia coli BW25113 0.34 b2319 usg hypothetical protein (NCBI) 0.65 b4019 metH B12-dependent methionine synthase (NCBI) low > 76
Escherichia coli BL21 0.34 ECD_02244 putative semialdehyde dehydrogenase 0.65 ECD_03891 homocysteine-N5-methyltetrahydrofolate transmethylase, B12-dependent low > 60
Escherichia coli ECRC99 0.34 KEDOAH_05530 usg aspartate-semialdehyde dehydrogenase 0.65 KEDOAH_14920 metH methionine synthase — —
Escherichia coli ECRC62 0.34 BNILDI_13220 usg aspartate-semialdehyde dehydrogenase 0.65 BNILDI_06140 metH methionine synthase — —
Escherichia coli ECRC101 0.33 MCAODC_13705 usg aspartate-semialdehyde dehydrogenase 0.65 MCAODC_03740 metH methionine synthase — —
Escherichia coli ECRC101 0.33 OKFHMN_22665 usg aspartate-semialdehyde dehydrogenase 0.65 OKFHMN_13240 metH methionine synthase — —
Escherichia coli ECRC102 0.33 NIAGMN_20440 usg aspartate-semialdehyde dehydrogenase 0.65 NIAGMN_10990 metH methionine synthase — —
Escherichia coli ECRC98 0.33 JDDGAC_26625 usg aspartate-semialdehyde dehydrogenase 0.65 JDDGAC_16865 metH methionine synthase — —
Dickeya dianthicola ME23 0.33 DZA65_RS15375 aspartate-semialdehyde dehydrogenase 0.65 DZA65_RS20250 methionine synthase low > 75
Agrobacterium fabrum C58 0.33 Atu2490 aspartate-semialdehyde dehydrogenase 0.59 Atu2155 methionine synthase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.33 GFF1935 Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) 0.65 GFF1358 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) low > 78
Dickeya dianthicola 67-19 0.33 HGI48_RS14440 aspartate-semialdehyde dehydrogenase 0.64 HGI48_RS19130 methionine synthase — —
Rahnella sp. WP5 0.33 EX31_RS19605 aspartate-semialdehyde dehydrogenase 0.66 EX31_RS11760 methionine synthase low > 89
Sinorhizobium meliloti 1021 0.32 SMc04410 aspartate-semialdehyde dehydrogenase 0.59 SMc03112 B12-dependent methionine synthase — —
Pectobacterium carotovorum WPP14 0.32 HER17_RS06985 aspartate-semialdehyde dehydrogenase 0.66 HER17_RS02310 methionine synthase low > 75
Enterobacter asburiae PDN3 0.31 EX28DRAFT_0285 Aspartate-semialdehyde dehydrogenase 0.65 EX28DRAFT_4326 methionine synthase (B12-dependent) (EC 2.1.1.13) low > 76
Rhodopseudomonas palustris CGA009 0.31 TX73_001190 aspartate-semialdehyde dehydrogenase 0.61 TX73_019180 methionine synthase — —
Pantoea sp. MT58 0.31 IAI47_06240 aspartate-semialdehyde dehydrogenase 0.66 IAI47_17990 methionine synthase low > 76
Rhizobium sp. OAE497 0.31 ABIE40_RS19095 aspartate-semialdehyde dehydrogenase 0.60 ABIE40_RS12135 methionine synthase — —
Magnetospirillum magneticum AMB-1 0.30 AMB_RS03035 aspartate-semialdehyde dehydrogenase 0.22 AMB_RS02225 methionine synthase — —
Azospirillum sp. SherDot2 0.30 MPMX19_02000 Aspartate-semialdehyde dehydrogenase 2 0.22 MPMX19_00637 Methionine synthase — —
Rhodospirillum rubrum S1H 0.29 Rru_A1196 Aspartate-semialdehyde dehydrogenase, USG-1 related (NCBI) 0.20 Rru_A1531 5-methyltetrahydrofolate--homocysteine methyltransferase (NCBI) — —
Parabacteroides merdae CL09T00C40 0.28 HMPREF1078_RS05255 aspartate-semialdehyde dehydrogenase 0.48 HMPREF1078_RS14955 methionine synthase — —
Pedobacter sp. GW460-11-11-14-LB5 0.28 CA265_RS15395 aspartate-semialdehyde dehydrogenase 0.60 CA265_RS23440 methionine synthase — —
Synechococcus elongatus PCC 7942 0.27 Synpcc7942_1848 asd aspartate-semialdehyde dehydrogenase 0.21 Synpcc7942_1372 metH methionine synthase (B12-dependent) — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.27 ABZR88_RS18675 aspartate-semialdehyde dehydrogenase 0.60 ABZR88_RS20930 methionine synthase — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.25 CA264_18890 aspartate-semialdehyde dehydrogenase 0.59 CA264_16785 methionine synthase — —
Mycobacterium tuberculosis H37Rv 0.24 Rv3708c Aspartate-semialdehyde dehydrogenase Asd (ASA dehydrogenase) (ASADH) (aspartic semialdehyde dehydrogenase) (L-aspartate-beta-semialdehyde dehydrogenase) 0.21 Rv2124c 5-methyltetrahydrofolate--homocystein methyltransferase MetH (methionine synthase, vitamin-B12 dependent isozyme) (ms) — —

Not shown: 24 genomes with orthologs for PS417_18575 only; 6 genomes with orthologs for PS417_12310 only