| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas stutzeri RCH2 | 1.0 | Psest_1510 | | Putative Zn-dependent protease, contains TPR repeats | 1.0 | Psest_2138 | | RND family efflux transporter, MFP subunit | 0.35 | 16 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.73 | Psyr_1543 | | Peptidase M48, Ste24p | 0.58 | Psyr_2482 | | Secretion protein HlyD | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.73 | Psyr_1543 | | Peptidase M48, Ste24p | 0.58 | Psyr_2482 | | Secretion protein HlyD | low | > 86 |
| Pseudomonas sp. S08-1 | 0.73 | OH686_19195 | | Exported zinc metalloprotease YfgC precursor | 0.56 | OH686_00920 | | Multidrug efflux system MdtABC-TolC, membrane fusion component MdtA | low | > 80 |
| Pseudomonas putida KT2440 | 0.72 | PP_1232 | | conserved exported protein of unknown function | 0.54 | PP_3585 | | multidrug efflux transport system - putative membrane fusion protein | low | > 96 |
| Pseudomonas sp. BP01 | 0.72 | JOY50_RS01735 | | M48 family metalloprotease | 0.53 | JOY50_RS07355 | | MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit | low | > 84 |
| Pseudomonas sp. SVBP6 | 0.70 | COO64_RS20220 | | M48 family metalloprotease | 0.57 | COO64_RS14560 | | MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit | low | > 93 |
| Pseudomonas fluorescens FW300-N2C3 | 0.69 | AO356_04555 | | peptidase M48 | 0.58 | AO356_25870 | | secretion protein HlyD | low | > 104 |
| Pseudomonas sp. RS175 | 0.69 | PFR28_00694 | | Beta-barrel assembly-enhancing protease | 0.59 | PFR28_02195 | | Multidrug resistance protein MdtA | low | > 88 |
| Pseudomonas fluorescens FW300-N2E2 | 0.69 | Pf6N2E2_2752 | | Exported zinc metalloprotease YfgC precursor | 0.59 | Pf6N2E2_1273 | | Probable RND efflux membrane fusion protein | low | > 103 |
| Pseudomonas fluorescens GW456-L13 | 0.69 | PfGW456L13_4512 | | Exported zinc metalloprotease YfgC precursor | 0.59 | PfGW456L13_3267 | | RND transporter, membrane fusion protein | low | > 87 |
| Pseudomonas fluorescens FW300-N1B4 | 0.68 | Pf1N1B4_3327 | | Exported zinc metalloprotease YfgC precursor | 0.59 | Pf1N1B4_4664 | | RND transporter, membrane fusion protein | — | — |
| Pseudomonas sp. DMC3 | 0.67 | GFF2281 | | Beta-barrel assembly-enhancing protease | 0.57 | GFF3508 | | Multidrug resistance protein MdtA | low | > 89 |
| Pseudomonas lactucae CFBP13502 | 0.67 | GEMAOFIL_01576 | | Beta-barrel assembly-enhancing protease | 0.58 | GEMAOFIL_02796 | | Multidrug resistance protein MdtA | low | > 93 |
| Pseudomonas simiae WCS417 | 0.66 | PS417_07140 | | peptidase M48 | 0.58 | PS417_12740 | | secretion protein HlyD | low | > 88 |
| Pseudomonas fluorescens SBW25 | 0.66 | PFLU_RS07250 | | M48 family metallopeptidase | 0.58 | PFLU_RS13425 | | MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.66 | PFLU_RS07250 | | M48 family metallopeptidase | 0.58 | PFLU_RS13425 | | MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit | low | > 109 |
| Pseudomonas aeruginosa PA14 | 0.66 | IKLFDK_04560 | | peptidase M48 | 0.48 | IKLFDK_12425 | | multidrug efflux RND transporter periplasmic adaptor subunit MuxA | low | > 100 |
| Pseudomonas fluorescens FW300-N2E3 | 0.64 | AO353_17645 | | peptidase M48 | 0.57 | AO353_22890 | | secretion protein HlyD | low | > 101 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.24 | GFF2175 | | Exported zinc metalloprotease YfgC precursor | 0.37 | GFF3855 | | Multidrug transporter MdtA | low | > 78 |
| Enterobacter asburiae PDN3 | 0.23 | EX28DRAFT_0178 | | Putative Zn-dependent protease, contains TPR repeats | 0.42 | EX28DRAFT_0484 | | RND family efflux transporter, MFP subunit | low | > 76 |
| Escherichia coli ECRC99 | 0.23 | KEDOAH_06385 | bepA | beta-barrel assembly-enhancing protease | 0.40 | KEDOAH_03950 | mdtA | multidrug efflux RND transporter subunit MdtA | — | — |
| Escherichia coli BW25113 | 0.23 | b2494 | yfgC | predicted peptidase (NCBI) | 0.40 | b2074 | b2074 | putative membrane protein (VIMSS) | low | > 76 |
| Escherichia coli BL21 | 0.23 | ECD_02386 | | OM protein maintenance and assembly metalloprotease and chaperone, periplasmic | 0.40 | ECD_01979 | | multidrug efflux system, subunit A | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.23 | OHPLBJKB_01232 | | Beta-barrel assembly-enhancing protease | 0.40 | OHPLBJKB_01630 | | Multidrug resistance protein MdtA | low | > 74 |
| Escherichia coli ECRC102 | 0.23 | NIAGMN_19605 | bepA | beta-barrel assembly-enhancing protease | 0.40 | NIAGMN_22145 | mdtA | multidrug efflux RND transporter subunit MdtA | low | > 80 |
| Escherichia coli ECRC98 | 0.23 | JDDGAC_25780 | bepA | beta-barrel assembly-enhancing protease | 0.40 | JDDGAC_28310 | mdtA | multidrug efflux RND transporter subunit MdtA | low | > 87 |
| Escherichia coli ECRC62 | 0.23 | BNILDI_12295 | bepA | beta-barrel assembly-enhancing protease | 0.40 | BNILDI_14460 | mdtA | multidrug efflux RND transporter subunit MdtA | low | > 75 |
| Escherichia coli ECRC100 | 0.23 | OKFHMN_21835 | bepA | beta-barrel assembly-enhancing protease | 0.40 | OKFHMN_24200 | mdtA | multidrug efflux RND transporter subunit MdtA | low | > 79 |
| Escherichia coli ECOR27 | 0.23 | NOLOHH_13485 | bepA | beta-barrel assembly-enhancing protease | 0.40 | NOLOHH_15545 | mdtA | multidrug efflux RND transporter subunit MdtA | low | > 76 |
| Escherichia coli ECRC101 | 0.23 | MCAODC_12365 | bepA | beta-barrel assembly-enhancing protease | 0.40 | MCAODC_20740 | mdtA | multidrug efflux RND transporter subunit MdtA | low | > 88 |
| Escherichia coli ECOR38 | 0.23 | HEPCGN_21000 | bepA | beta-barrel assembly-enhancing protease | 0.41 | HEPCGN_02890 | mdtA | multidrug efflux RND transporter subunit MdtA | low | > 88 |
| Dickeya dadantii 3937 | 0.23 | DDA3937_RS06050 | | M48 family metallopeptidase | 0.39 | DDA3937_RS15260 | | MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit | low | > 74 |
| Enterobacter sp. TBS_079 | 0.23 | MPMX20_03344 | | Beta-barrel assembly-enhancing protease | 0.41 | MPMX20_03060 | | Multidrug resistance protein MdtA | low | > 85 |
| Erwinia tracheiphila HP pepo 2.2 | 0.23 | IJEDHG_18400 | | Beta-barrel assembly-enhancing protease | 0.38 | IJEDHG_18805 | | MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit | low | > 61 |
| Erwinia tracheiphila SCR3 | 0.23 | LU632_RS08305 | | M48 family metallopeptidase | 0.38 | LU632_RS08695 | | MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit | low | > 74 |
| Escherichia coli Nissle 1917 | 0.23 | ECOLIN_RS14165 | | beta-barrel assembly-enhancing protease | 0.40 | ECOLIN_RS12195 | | multidrug efflux RND transporter subunit MdtA | low | > 55 |
| Escherichia fergusonii Becca | 0.23 | EFB2_01404 | | Beta-barrel assembly-enhancing protease | 0.40 | EFB2_01781 | | Multidrug resistance protein MdtA | low | > 86 |
| Klebsiella michiganensis M5al | 0.23 | BWI76_RS20925 | | peptidase M48 | 0.39 | BWI76_RS19250 | | multidrug transporter subunit MdtA | low | > 92 |
| Dickeya dianthicola ME23 | 0.23 | DZA65_RS06445 | | M48 family metallopeptidase | 0.37 | DZA65_RS16160 | | MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit | low | > 75 |
| Dickeya dianthicola 67-19 | 0.23 | HGI48_RS06095 | | M48 family metallopeptidase | 0.38 | HGI48_RS15340 | | MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit | low | > 71 |
| Klebsiella pneumoniae MKP103 | 0.23 | KDGMDA_27765 | | beta-barrel assembly-enhancing protease | 0.39 | KDGMDA_26300 | | MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit | low | > 95 |
| Erwinia amylovora T8 | 0.23 | OLJFJH_10615 | | Beta-barrel assembly-enhancing protease | 0.39 | OLJFJH_11975 | | MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit | low | > 58 |
| Rahnella sp. WP5 | 0.23 | EX31_RS22720 | | M48 family metallopeptidase | 0.38 | EX31_RS13385 | | MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit | low | > 89 |
| Serratia liquefaciens MT49 | 0.22 | IAI46_18840 | | M48 family metallopeptidase | 0.37 | IAI46_18970 | | MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit | low | > 86 |
| Pantoea agglomerans CFBP13505 P0401 | 0.22 | PagCFBP13505_RS15095 | | M48 family metallopeptidase | 0.42 | PagCFBP13505_RS00985 | | MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit | low | > 74 |
| Pantoea sp. MT58 | 0.22 | IAI47_05205 | | M48 family metallopeptidase | 0.41 | IAI47_06875 | | MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit | low | > 76 |
| Pectobacterium carotovorum WPP14 | 0.21 | HER17_RS15440 | | M48 family metallopeptidase | 0.39 | HER17_RS06325 | | MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit | low | > 75 |
| Ralstonia solanacearum PSI07 | 0.21 | RPSI07_RS21205 | | peptidase M48 | 0.45 | RPSI07_RS05510 | | multidrug transporter subunit MdtA | low | > 81 |
| Ralstonia solanacearum GMI1000 | 0.21 | RS_RS02810 | | peptidase M48 | 0.43 | RS_RS22910 | | multidrug transporter subunit MdtA | low | > 80 |
| Ralstonia solanacearum UW163 | 0.21 | UW163_RS01485 | | peptidase M48 | 0.44 | UW163_RS21005 | | multidrug transporter subunit MdtA | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.21 | RALBFv3_RS12125 | | peptidase M48 | 0.44 | RALBFv3_RS18125 | | multidrug transporter subunit MdtA | low | > 76 |
| Methylophilus sp. DMC18 | 0.21 | GFF2283 | | Beta-barrel assembly-enhancing protease | 0.37 | GFF2676 | | Multidrug resistance protein MdtA | low | > 43 |
| Burkholderia phytofirmans PsJN | 0.20 | BPHYT_RS16315 | | peptidase M48 Ste24p | 0.40 | BPHYT_RS07790 | | RND transporter MFP subunit | low | > 109 |
| Ralstonia sp. UNC404CL21Col | 0.20 | ABZR87_RS08020 | | M48 family metalloprotease | 0.44 | ABZR87_RS19030 | | MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit | low | > 80 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.20 | Xcc-8004.4060.1 | | Exported zinc metalloprotease YfgC precursor | 0.30 | Xcc-8004.4791.1 | | Probable Co/Zn/Cd efflux system membrane fusion protein | low | > 74 |
| Paraburkholderia sabiae LMG 24235 | 0.20 | QEN71_RS02380 | | M48 family metalloprotease | 0.42 | QEN71_RS23300 | | MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit | low | > 153 |
| Rhodanobacter sp000427505 FW510-R12 | 0.20 | LRK53_RS13580 | | M48 family metalloprotease | 0.25 | LRK53_RS02585 | | efflux RND transporter periplasmic adaptor subunit | low | > 59 |
| Rhodanobacter denitrificans FW104-10B01 | 0.19 | LRK54_RS15035 | | M48 family metalloprotease | 0.26 | LRK54_RS11900 | | efflux RND transporter periplasmic adaptor subunit | low | > 59 |
| Rhodanobacter denitrificans MT42 | 0.19 | LRK55_RS14750 | | M48 family metalloprotease | 0.25 | LRK55_RS11625 | | efflux RND transporter periplasmic adaptor subunit | low | > 63 |
| Castellaniella sp019104865 MT123 | 0.19 | ABCV34_RS07945 | | M48 family metalloprotease | 0.35 | ABCV34_RS14615 | | efflux RND transporter periplasmic adaptor subunit | low | > 48 |
| Dyella japonica UNC79MFTsu3.2 | 0.18 | ABZR86_RS00725 | | M48 family metalloprotease | 0.27 | ABZR86_RS16315 | | efflux RND transporter periplasmic adaptor subunit | low | > 74 |
| Rhodanobacter sp. FW510-T8 | 0.18 | OKGIIK_03795 | | Putative beta-barrel assembly-enhancing protease | 0.26 | OKGIIK_11995 | | efflux RND transporter periplasmic adaptor subunit | low | > 52 |
Not shown: 17 genomes with orthologs for Psest_1510 only; 12 genomes with orthologs for Psest_2138 only