Conservation of cofitness between Psest_0161 and Psest_1492 in Pseudomonas stutzeri RCH2

43 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_0161 Membrane-bound metallopeptidase 1.0 Psest_1492 DNA-binding ferritin-like protein (oxidative damage protectant) 0.31 3
Pseudomonas fluorescens SBW25-INTG 0.72 PFLU_RS01650 murein hydrolase activator EnvC 0.85 PFLU_RS24120 DNA starvation/stationary phase protection protein low > 109
Pseudomonas fluorescens SBW25 0.72 PFLU_RS01650 murein hydrolase activator EnvC 0.85 PFLU_RS24120 DNA starvation/stationary phase protection protein low > 109
Pseudomonas simiae WCS417 0.71 PS417_01600 peptidase M23 0.85 PS417_22480 ferritin low > 88
Pseudomonas fluorescens FW300-N2E2 0.70 Pf6N2E2_3834 Lipoprotein NlpD 0.84 Pf6N2E2_5529 Non-specific DNA-binding protein Dps / Iron-binding ferritin-like antioxidant protein / Ferroxidase (EC 1.16.3.1) low > 103
Pseudomonas sp. RS175 0.69 PFR28_04937 Murein hydrolase activator EnvC 0.84 PFR28_03419 DNA protection during starvation protein 2 low > 88
Pseudomonas fluorescens FW300-N2C3 0.69 AO356_09775 peptidase M23 0.84 AO356_17990 ferritin low > 104
Pseudomonas syringae pv. syringae B728a ΔmexB 0.68 Psyr_4886 Peptidase M23B 0.84 Psyr_1404 Ferritin and Dps low > 86
Pseudomonas syringae pv. syringae B728a 0.68 Psyr_4886 Peptidase M23B 0.84 Psyr_1404 Ferritin and Dps low > 86
Pseudomonas sp. S08-1 0.67 OH686_14650 Murein hydrolase activator EnvC 0.95 OH686_19105 DNA protection during starvation protein low > 80
Pseudomonas putida KT2440 0.64 PP_5057 Peptidase, M23/M37 family 0.81 PP_1210 DNA-binding stress protein low > 96
Marinobacter adhaerens HP15 0.29 HP15_3006 peptidase M23B 0.31 HP15_3253 ferritin-like DNA-binding protein low > 73
Kangiella aquimarina DSM 16071 0.27 B158DRAFT_0705 Membrane-bound metallopeptidase 0.66 B158DRAFT_0476 DNA-binding ferritin-like protein (oxidative damage protectant) low > 40
Shewanella sp. ANA-3 0.26 Shewana3_0050 peptidase M23B (RefSeq) 0.67 Shewana3_0985 Ferritin, Dps family protein (RefSeq) low > 73
Shewanella amazonensis SB2B 0.25 Sama_0059 M24/M37 family peptidase (RefSeq) 0.61 Sama_2598 Dps family protein (RefSeq) low > 62
Shewanella oneidensis MR-1 0.25 SO0048 peptidase, M23/M37 family (NCBI ptt file) 0.66 SO1158 Dps family protein (NCBI ptt file) low > 76
Dickeya dianthicola 67-19 0.25 HGI48_RS00780 murein hydrolase activator EnvC 0.32 HGI48_RS06880 DNA starvation/stationary phase protection protein low > 71
Dickeya dadantii 3937 0.24 DDA3937_RS20420 murein hydrolase activator EnvC 0.32 DDA3937_RS06890 DNA starvation/stationary phase protection protein low > 74
Dickeya dianthicola ME23 0.24 DZA65_RS00835 murein hydrolase activator EnvC 0.31 DZA65_RS07220 DNA starvation/stationary phase protection protein low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.24 GFF397 Periplasmic septal ring factor with murein hydrolase activity EnvC/YibP 0.16 GFF707 Non-specific DNA-binding protein Dps / Iron-binding ferritin-like antioxidant protein / Ferroxidase (EC 1.16.3.1) — —
Dechlorosoma suillum PS 0.24 Dsui_1271 membrane-bound metallopeptidase 0.72 Dsui_0822 DNA-binding ferritin-like protein (oxidative damage protectant) low > 51
Escherichia coli Nissle 1917 0.23 ECOLIN_RS20620 murein hydrolase activator EnvC 0.16 ECOLIN_RS04330 DNA starvation/stationary phase protection protein Dps — —
Lysobacter sp. OAE881 0.23 ABIE51_RS19260 peptidoglycan DD-metalloendopeptidase family protein 0.66 ABIE51_RS05150 Dps family protein low > 62
Klebsiella michiganensis M5al 0.23 BWI76_RS27235 murein hydrolase activator EnvC 0.16 BWI76_RS08980 DNA starvation/stationary phase protection protein low > 92
Enterobacter sp. TBS_079 0.23 MPMX20_00120 Murein hydrolase activator EnvC 0.16 MPMX20_01442 DNA protection during starvation protein low > 85
Alteromonas macleodii MIT1002 0.23 MIT1002_00489 Septal ring factor 0.64 MIT1002_00525 DNA protection during starvation protein 2 low > 70
Erwinia tracheiphila SCR3 0.23 LU632_RS21895 envC murein hydrolase activator EnvC 0.18 LU632_RS09460 dps DNA starvation/stationary phase protection protein Dps low > 74
Enterobacter asburiae PDN3 0.23 EX28DRAFT_3864 Membrane-bound metallopeptidase 0.16 EX28DRAFT_2174 DNA-binding ferritin-like protein (oxidative damage protectant) low > 76
Herbaspirillum seropedicae SmR1 0.22 HSERO_RS00825 protease 0.77 HSERO_RS02145 ferritin low > 78
Serratia liquefaciens MT49 0.22 IAI46_24715 murein hydrolase activator EnvC 0.32 IAI46_14135 DNA starvation/stationary phase protection protein low > 86
Pantoea sp. MT58 0.22 IAI47_00720 murein hydrolase activator EnvC 0.18 IAI47_13195 DNA starvation/stationary phase protection protein Dps low > 76
Xanthomonas campestris pv. campestris strain 8004 0.20 Xcc-8004.29.1 Cell wall endopeptidase, family M23/M37 0.62 Xcc-8004.1478.1 Non-specific DNA-binding protein Dps / Iron-binding ferritin-like antioxidant protein / Ferroxidase (EC 1.16.3.1) low > 74
Vibrio cholerae E7946 ATCC 55056 0.18 CSW01_01735 peptidase M23 0.26 CSW01_00700 DNA starvation/stationary phase protection protein low > 62
Castellaniella sp019104865 MT123 0.17 ABCV34_RS14275 peptidoglycan DD-metalloendopeptidase family protein 0.69 ABCV34_RS03580 Dps family protein low > 48
Rhodanobacter sp. FW510-T8 0.16 OKGIIK_12915 Peptidase M23 0.63 OKGIIK_02150 dps DNA-binding ferritin-like protein (oxidative damage protectant) low > 52
Rhodanobacter denitrificans MT42 0.16 LRK55_RS10660 peptidoglycan DD-metalloendopeptidase family protein 0.62 LRK55_RS12415 Dps family protein — —
Rhodanobacter denitrificans FW104-10B01 0.16 LRK54_RS10955 peptidoglycan DD-metalloendopeptidase family protein 0.63 LRK54_RS12710 DNA starvation/stationary phase protection protein low > 59
Dyella japonica UNC79MFTsu3.2 0.15 ABZR86_RS13355 peptidoglycan DD-metalloendopeptidase family protein 0.63 ABZR86_RS19715 Dps family protein low > 74
Bacteroides ovatus ATCC 8483 0.10 BACOVA_01841 peptidase, M23 family 0.28 BACOVA_05566 DNA protection during starvation protein low > 94
Echinicola vietnamensis KMM 6221, DSM 17526 0.09 Echvi_4076 Membrane-bound metallopeptidase 0.28 Echvi_0586 DNA-binding ferritin-like protein (oxidative damage protectant) low > 79
Bacteroides thetaiotaomicron VPI-5482 0.09 BT3464 putative peptidase (NCBI ptt file) 0.28 BT4715 non-specific DNA-binding protein Dps (NCBI ptt file) low > 81
Azospirillum sp. SherDot2 0.08 MPMX19_01938 hypothetical protein 0.74 MPMX19_02373 DNA protection during starvation protein 2 0.42 78
Pedobacter sp. GW460-11-11-14-LB5 0.08 CA265_RS19025 peptidase M23 0.26 CA265_RS06325 DNA starvation/stationary phase protection protein low > 88
Bacteroides stercoris CC31F 0.08 HMPREF1181_RS02875 peptidoglycan DD-metalloendopeptidase family protein 0.29 HMPREF1181_RS02165 DNA starvation/stationary phase protection protein low > 56

Not shown: 19 genomes with orthologs for Psest_0161 only; 31 genomes with orthologs for Psest_1492 only