Conservation of cofitness between EX31_RS21480 and EX31_RS14135 in Rahnella sp. WP5

53 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Rahnella sp. WP5 1.0 EX31_RS21480 5-formyltetrahydrofolate cyclo-ligase 1.0 EX31_RS14135 TonB-dependent vitamin B12 receptor BtuB 0.64 2
Pectobacterium carotovorum WPP14 0.69 HER17_RS19095 5-formyltetrahydrofolate cyclo-ligase 0.68 HER17_RS00980 TonB-dependent vitamin B12 receptor BtuB low > 75
Serratia liquefaciens MT49 0.65 IAI46_20895 5-formyltetrahydrofolate cyclo-ligase 0.71 IAI46_24450 TonB-dependent vitamin B12 receptor BtuB low > 86
Dickeya dadantii 3937 0.63 DDA3937_RS02410 5-formyltetrahydrofolate cyclo-ligase 0.55 DDA3937_RS00995 TonB-dependent vitamin B12 receptor BtuB low > 74
Dickeya dianthicola 67-19 0.62 HGI48_RS02370 5-formyltetrahydrofolate cyclo-ligase 0.69 HGI48_RS20380 TonB-dependent vitamin B12 receptor BtuB low > 71
Escherichia coli ECOR38 0.62 HEPCGN_18775 ygfA 5-formyltetrahydrofolate cyclo-ligase 0.65 HEPCGN_12185 btuB TonB-dependent vitamin B12 receptor BtuB low > 87
Escherichia coli Nissle 1917 0.62 ECOLIN_RS16205 5-formyltetrahydrofolate cyclo-ligase 0.65 ECOLIN_RS22905 TonB-dependent vitamin B12 receptor BtuB low > 55
Escherichia coli ECRC102 0.62 NIAGMN_17250 ygfA 5-formyltetrahydrofolate cyclo-ligase 0.65 NIAGMN_11280 btuB TonB-dependent vitamin B12 receptor BtuB — —
Escherichia coli ECOR27 0.62 NOLOHH_11395 ygfA 5-formyltetrahydrofolate cyclo-ligase 0.64 NOLOHH_05675 btuB TonB-dependent vitamin B12 receptor BtuB low > 75
Escherichia coli ECRC100 0.62 OKFHMN_19485 ygfA 5-formyltetrahydrofolate cyclo-ligase 0.65 OKFHMN_13530 btuB TonB-dependent vitamin B12 receptor BtuB low > 80
Escherichia fergusonii Becca 0.62 EFB2_00991 5-formyltetrahydrofolate cyclo-ligase 0.55 EFB2_04644 Vitamin B12 transporter BtuB low > 86
Escherichia coli ECRC62 0.62 BNILDI_09930 ygfA 5-formyltetrahydrofolate cyclo-ligase 0.65 BNILDI_05850 btuB TonB-dependent vitamin B12 receptor BtuB low > 75
Escherichia coli ECRC98 0.62 JDDGAC_23125 ygfA 5-formyltetrahydrofolate cyclo-ligase 0.65 JDDGAC_17155 btuB TonB-dependent vitamin B12 receptor BtuB low > 86
Escherichia coli ECRC101 0.62 MCAODC_10005 ygfA 5-formyltetrahydrofolate cyclo-ligase 0.65 MCAODC_04030 btuB TonB-dependent vitamin B12 receptor BtuB low > 87
Escherichia coli ECRC99 0.62 KEDOAH_08655 ygfA 5-formyltetrahydrofolate cyclo-ligase 0.65 KEDOAH_14630 btuB TonB-dependent vitamin B12 receptor BtuB — —
Enterobacter sp. TBS_079 0.60 MPMX20_03770 5-formyltetrahydrofolate cyclo-ligase 0.64 MPMX20_04514 Vitamin B12 transporter BtuB low > 85
Klebsiella michiganensis M5al 0.60 BWI76_RS23915 5-formyltetrahydrofolate cyclo-ligase 0.53 BWI76_RS00890 vitamin B12/cobalamin outer membrane transporter 0.20 62
Escherichia coli HS(pFamp)R (ATCC 700891) 0.60 OHPLBJKB_00804 5-formyltetrahydrofolate cyclo-ligase 0.64 OHPLBJKB_04084 Vitamin B12 transporter BtuB low > 73
Escherichia coli BW25113 0.60 b2912 ygfA putative ligase (VIMSS) 0.65 b3966 btuB vitamin B12/cobalamin outer membrane transporter (NCBI) low > 76
Dickeya dianthicola ME23 0.59 DZA65_RS02475 5-formyltetrahydrofolate cyclo-ligase 0.54 DZA65_RS21425 TonB-dependent vitamin B12 receptor BtuB low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.58 GFF3012 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) 0.64 GFF2352 Outer membrane vitamin B12 receptor BtuB low > 78
Pantoea sp. MT58 0.56 IAI47_03730 5-formyltetrahydrofolate cyclo-ligase 0.67 IAI47_00955 TonB-dependent vitamin B12 receptor BtuB low > 76
Enterobacter asburiae PDN3 0.55 EX28DRAFT_2964 5,10-methenyltetrahydrofolate synthetase 0.67 EX28DRAFT_4429 TonB-dependent vitamin B12 receptor low > 76
Vibrio cholerae E7946 ATCC 55056 0.51 CSW01_12545 5-formyltetrahydrofolate cyclo-ligase 0.28 CSW01_00790 vitamin B12 transporter BtuB low > 62
Pseudomonas stutzeri RCH2 0.31 Psest_0170 5,10-methenyltetrahydrofolate synthetase 0.20 Psest_3016 TonB-dependent vitamin B12 receptor low > 67
Pseudomonas simiae WCS417 0.28 PS417_27305 5-formyltetrahydrofolate cyclo-ligase 0.15 PS417_25210 TonB-dependent receptor low > 88
Marinobacter adhaerens HP15 0.28 HP15_3211 5-formyltetrahydrofolate cyclo-ligase 0.14 HP15_3953 outer membrane receptor for transport of vitamin B low > 73
Pseudomonas fluorescens SBW25-INTG 0.27 PFLU_RS28965 5-formyltetrahydrofolate cyclo-ligase 0.14 PFLU_RS26850 TonB-dependent receptor low > 109
Pseudomonas fluorescens SBW25 0.27 PFLU_RS28965 5-formyltetrahydrofolate cyclo-ligase 0.14 PFLU_RS26850 TonB-dependent receptor low > 109
Pseudomonas fluorescens FW300-N2E3 0.26 AO353_08780 5-formyltetrahydrofolate cyclo-ligase 0.15 AO353_06660 TonB-dependent receptor low > 101
Pseudomonas fluorescens GW456-L13 0.26 PfGW456L13_892 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) 0.15 PfGW456L13_1324 Outer membrane vitamin B12 receptor BtuB low > 87
Pseudomonas fluorescens FW300-N1B4 0.25 Pf1N1B4_2225 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) 0.15 Pf1N1B4_2660 Outer membrane vitamin B12 receptor BtuB low > 87
Pseudomonas putida KT2440 0.25 PP_5203 5-formyltetrahydrofolate cyclo-ligase 0.15 PP_0525 TonB-dependent receptor, B12 family low > 96
Pseudomonas sp. RS175 0.25 PFR28_04325 5-formyltetrahydrofolate cyclo-ligase 0.16 PFR28_03938 Vitamin B12 transporter BtuB low > 88
Pseudomonas fluorescens FW300-N2E2 0.24 Pf6N2E2_4476 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) 0.15 Pf6N2E2_4930 Outer membrane vitamin B12 receptor BtuB low > 103
Pseudomonas fluorescens FW300-N2C3 0.24 AO356_12990 5-formyltetrahydrofolate cyclo-ligase 0.15 AO356_14985 TonB-dependent receptor low > 104
Acinetobacter radioresistens SK82 0.24 MPMX26_02298 5-formyltetrahydrofolate cyclo-ligase 0.13 MPMX26_02619 Vitamin B12 transporter BtuB low > 36
Pseudomonas sp. S08-1 0.24 OH686_11225 5-formyltetrahydrofolate cyclo-ligase 0.17 OH686_15755 Outer membrane vitamin B12 receptor BtuB low > 80
Lysobacter sp. OAE881 0.23 ABIE51_RS17355 5-formyltetrahydrofolate cyclo-ligase 0.22 ABIE51_RS18005 TonB-dependent vitamin B12 receptor low > 62
Xanthomonas campestris pv. campestris strain 8004 0.23 Xcc-8004.1138.1 5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) 0.20 Xcc-8004.1388.1 Outer membrane vitamin B12 receptor BtuB low > 74
Rhodospirillum rubrum S1H 0.22 Rru_A1084 5-formyltetrahydrofolate cyclo-ligase (NCBI) 0.11 Rru_A0488 TonB-dependent receptor (NCBI) low > 58
Rhodanobacter sp. FW510-T8 0.20 OKGIIK_12225 5-formyltetrahydrofolate cyclo-ligase 0.24 OKGIIK_05465 btuB TonB-dependent vitamin B12 receptor low > 52
Pontibacter actiniarum KMM 6156, DSM 19842 0.19 CA264_15880 5-formyltetrahydrofolate cyclo-ligase 0.05 CA264_19150 TonB dependent receptor low > 74
Rhodanobacter denitrificans FW104-10B01 0.19 LRK54_RS11670 5-formyltetrahydrofolate cyclo-ligase 0.20 LRK54_RS07830 TonB-dependent vitamin B12 receptor low > 59
Caulobacter crescentus NA1000 Δfur 0.19 CCNA_03354 5-formyltetrahydrofolate cyclo-ligase 0.15 CCNA_01826 vitamin B12 receptor low > 67
Caulobacter crescentus NA1000 0.19 CCNA_03354 5-formyltetrahydrofolate cyclo-ligase 0.15 CCNA_01826 vitamin B12 receptor 0.80 2
Rhodanobacter denitrificans MT42 0.19 LRK55_RS11395 5-formyltetrahydrofolate cyclo-ligase 0.20 LRK55_RS07560 TonB-dependent vitamin B12 receptor low > 63
Phocaeicola dorei CL03T12C01 0.18 ABI39_RS13145 5-formyltetrahydrofolate cyclo-ligase 0.08 ABI39_RS15560 TonB-dependent receptor low > 72
Phocaeicola vulgatus CL09T03C04 0.18 HMPREF1058_RS17145 5-formyltetrahydrofolate cyclo-ligase 0.08 HMPREF1058_RS14965 TonB-dependent receptor low > 67
Dyella japonica UNC79MFTsu3.2 0.16 ABZR86_RS11995 5-formyltetrahydrofolate cyclo-ligase 0.22 ABZR86_RS10930 TonB-dependent vitamin B12 receptor low > 74
Ralstonia sp. UNC404CL21Col 0.15 ABZR87_RS04880 5-formyltetrahydrofolate cyclo-ligase 0.15 ABZR87_RS00095 TonB-dependent receptor low > 80
Castellaniella sp019104865 MT123 0.15 ABCV34_RS13555 5-formyltetrahydrofolate cyclo-ligase 0.17 ABCV34_RS14545 TonB-dependent receptor — —
Paraburkholderia sabiae LMG 24235 0.15 QEN71_RS28640 5-formyltetrahydrofolate cyclo-ligase 0.14 QEN71_RS25145 TonB-dependent receptor low > 153
Cupriavidus basilensis FW507-4G11 0.13 RR42_RS01400 5-formyltetrahydrofolate cyclo-ligase 0.15 RR42_RS16140 TonB-dependent receptor low > 128

Not shown: 25 genomes with orthologs for EX31_RS21480 only; 17 genomes with orthologs for EX31_RS14135 only