Conservation of cofitness between EX28DRAFT_1373 and EX28DRAFT_2648 in Enterobacter asburiae PDN3

47 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Enterobacter asburiae PDN3 1.0 EX28DRAFT_1373 Predicted NAD/FAD-binding protein 1.0 EX28DRAFT_2648 Integrase 0.54 6
Enterobacter sp. TBS_079 0.91 MPMX20_02175 hypothetical protein 0.41 MPMX20_00561 Prophage integrase IntA low > 85
Klebsiella pneumoniae MKP103 0.84 KDGMDA_11810 FAD-dependent oxidoreductase 0.93 KDGMDA_13990 integrase low > 95
Klebsiella michiganensis M5al 0.83 BWI76_RS12575 FAD-dependent oxidoreductase 0.92 BWI76_RS05825 putative site specific integrase low > 92
Erwinia amylovora T8 0.57 OLJFJH_16590 FAD-dependent oxidoreductase 0.60 OLJFJH_17590 integrase low > 58
Shewanella sp. ANA-3 0.57 Shewana3_1169 amine oxidase (RefSeq) 0.36 Shewana3_2953 phage integrase family protein (RefSeq) low > 73
Pectobacterium carotovorum WPP14 0.57 HER17_RS10560 FAD-dependent oxidoreductase 0.75 HER17_RS04720 tyrosine-type recombinase/integrase low > 75
Shewanella oneidensis MR-1 0.57 SO3381 conserved hypothetical protein (NCBI ptt file) 0.33 SO1471 site-specific recombinase, phage integrase family (NCBI ptt file) low > 76
Erwinia tracheiphila SCR3 0.57 LU632_RS09370 FAD-dependent oxidoreductase 0.42 LU632_RS07185 tyrosine-type recombinase/integrase low > 73
Erwinia tracheiphila HP pepo 2.2 0.56 IJEDHG_19835 FAD-dependent oxidoreductase 0.35 IJEDHG_16000 integrase low > 61
Shewanella loihica PV-4 0.56 Shew_1482 amine oxidase (RefSeq) 0.32 Shew_1267 phage integrase family protein (RefSeq) low > 60
Vibrio cholerae E7946 ATCC 55056 0.55 CSW01_05685 FAD-dependent oxidoreductase 0.33 CSW01_04365 integrase low > 62
Rahnella sp. WP5 0.55 EX31_RS23985 FAD-dependent oxidoreductase 0.66 EX31_RS20945 tyrosine-type recombinase/integrase low > 89
Pseudomonas fluorescens FW300-N2E2 0.52 Pf6N2E2_1348 COG2907: Amine oxidase, flavin-containing 0.34 Pf6N2E2_1266 Integrase low > 103
Pseudomonas sp. S08-1 0.51 OH686_07865 Amine oxidase, flavin-containing 0.40 OH686_21775 Phage integrase low > 80
Pseudomonas orientalis W4I3 0.50 QF045_RS06630 FAD-dependent oxidoreductase 0.33 QF045_RS26380 integrase domain-containing protein low > 93
Pseudomonas simiae WCS417 0.49 PS417_03650 FAD-dependent oxidoreductase 0.38 PS417_10250 integrase low > 88
Pseudomonas stutzeri RCH2 0.49 Psest_2400 Predicted NAD/FAD-binding protein 0.59 Psest_4016 Integrase low > 67
Pseudomonas putida KT2440 0.49 PP_2736 conserved protein of unknown function 0.10 PP_2501 putative phage integrase low > 96
Pseudomonas sp. BP01 0.49 JOY50_RS03420 NAD(P)/FAD-dependent oxidoreductase 0.32 JOY50_RS21995 integrase domain-containing protein — —
Pseudomonas fluorescens SBW25 0.49 PFLU_RS03700 FAD-dependent oxidoreductase 0.38 PFLU_RS00900 tyrosine-type recombinase/integrase low > 109
Pseudomonas sp. DMC3 0.49 GFF4482 hypothetical protein 0.32 GFF4956 Prophage integrase IntA low > 89
Pseudomonas segetis P6 0.49 MPMX49_01345 hypothetical protein 0.37 MPMX49_00502 Prophage integrase IntS low > 75
Pseudomonas fluorescens SBW25-INTG 0.49 PFLU_RS03700 FAD-dependent oxidoreductase 0.38 PFLU_RS00900 tyrosine-type recombinase/integrase low > 109
Alteromonas macleodii MIT1002 0.46 MIT1002_02686 protoporphyrinogen oxidase 0.16 MIT1002_04073 Putative prophage CPS-53 integrase low > 70
Lysobacter sp. OAE881 0.42 ABIE51_RS02530 FAD-dependent oxidoreductase 0.31 ABIE51_RS08660 site-specific integrase low > 62
Rhodanobacter denitrificans FW104-10B01 0.40 LRK54_RS07525 FAD-dependent oxidoreductase 0.14 LRK54_RS16785 integrase arm-type DNA-binding domain-containing protein low > 59
Rhodanobacter denitrificans MT42 0.40 LRK55_RS07265 FAD-dependent oxidoreductase 0.32 LRK55_RS10445 tyrosine-type recombinase/integrase low > 63
Rhodanobacter sp. FW510-T8 0.40 OKGIIK_13945 Dehydrogenase 0.36 OKGIIK_15870 integrase low > 53
Acidovorax sp. GW101-3H11 0.39 Ac3H11_1216 COG2907: Amine oxidase, flavin-containing 0.31 Ac3H11_381 Integrase 0.34 15
Burkholderia phytofirmans PsJN 0.39 BPHYT_RS05115 NADH-ubiquinone oxidoreductase subunit 6 0.24 BPHYT_RS32385 integrase low > 109
Rhizobium sp. OAE497 0.38 ABIE40_RS08315 FAD-dependent oxidoreductase 0.14 ABIE40_RS00670 site-specific integrase low > 107
Paraburkholderia sabiae LMG 24235 0.38 QEN71_RS19695 FAD-dependent oxidoreductase 0.24 QEN71_RS10240 tyrosine-type recombinase/integrase low > 153
Paraburkholderia bryophila 376MFSha3.1 0.37 H281DRAFT_01466 Predicted NAD/FAD-binding protein 0.38 H281DRAFT_02146 Integrase low > 103
Cupriavidus basilensis FW507-4G11 0.37 RR42_RS29225 NADH-ubiquinone oxidoreductase subunit 6 0.34 RR42_RS18370 integrase low > 128
Rhodospirillum rubrum S1H 0.37 Rru_A0723 Amine oxidase (NCBI) 0.24 Rru_A0354 Phage integrase (NCBI) low > 58
Bosea sp. OAE506 0.37 ABIE41_RS10275 NAD(P)/FAD-dependent oxidoreductase 0.13 ABIE41_RS07475 site-specific integrase low > 77
Variovorax sp. OAS795 0.36 ABID97_RS21860 FAD-dependent oxidoreductase 0.32 ABID97_RS11165 integrase arm-type DNA-binding domain-containing protein low > 91
Acinetobacter baumannii LAC-4 0.36 RR41_RS06580 FAD-dependent oxidoreductase 0.35 RR41_RS08440 tyrosine-type recombinase/integrase low > 55
Azospirillum sp. SherDot2 0.35 MPMX19_05741 hypothetical protein 0.15 MPMX19_02360 Prophage integrase IntA low > 112
Hydrogenophaga sp. GW460-11-11-14-LB1 0.35 GFF2528 COG2907: Amine oxidase, flavin-containing 0.25 GFF4358 Integrase low > 90
Agrobacterium fabrum C58 0.34 Atu1977 amine oxidase, flavin-containing 0.15 Atu3831 phage-related integrase low > 89
Phaeobacter inhibens DSM 17395 0.34 PGA1_c27520 amine oxidoreductase-like protein 0.08 PGA1_c00260 putative phage integrase, catalytic core low > 62
Rhodopseudomonas palustris CGA009 0.34 TX73_013295 NAD/FAD-binding protein 0.25 TX73_011375 tyrosine-type recombinase/integrase low > 86
Dinoroseobacter shibae DFL-12 0.33 Dshi_0367 amine oxidase (RefSeq) 0.10 Dshi_3213 integrase family protein (RefSeq) low > 64
Caulobacter crescentus NA1000 0.33 CCNA_02683 FAD dependent oxidoreductase 0.14 CCNA_00480 bacteriophage P4 integrase low > 66
Caulobacter crescentus NA1000 Δfur 0.33 CCNA_02683 FAD dependent oxidoreductase 0.14 CCNA_00480 bacteriophage P4 integrase low > 67
Acinetobacter radioresistens SK82 0.11 MPMX26_02881 hypothetical protein 0.35 MPMX26_02861 Prophage integrase IntS — —

Not shown: 16 genomes with orthologs for EX28DRAFT_1373 only; 39 genomes with orthologs for EX28DRAFT_2648 only