Conservation of cofitness between ECD_01118 and ECD_03828 in Escherichia coli BL21

53 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_01118 deacetylase of acs and cheY, chemotaxis regulator 1.0 ECD_03828 catalase-peroxidase HPI, heme b-containing 0.64 5
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_02546 NAD-dependent protein deacylase 1.00 OHPLBJKB_04108 Catalase-peroxidase low > 73
Escherichia coli ECRC62 0.98 BNILDI_19130 cobB NAD-dependent protein deacylase 1.00 BNILDI_05730 katG catalase/peroxidase HPI low > 75
Escherichia coli ECRC102 0.98 NIAGMN_24390 cobB NAD-dependent protein deacylase 1.00 NIAGMN_11415 katG catalase/peroxidase HPI — —
Escherichia coli ECOR38 0.98 HEPCGN_24045 cobB NAD-dependent protein deacylase 1.00 HEPCGN_12305 katG catalase/peroxidase HPI low > 87
Escherichia coli ECRC99 0.98 KEDOAH_24315 cobB NAD-dependent protein deacylase 1.00 KEDOAH_14500 katG catalase/peroxidase HPI — —
Escherichia coli ECOR27 0.98 NOLOHH_20965 cobB NAD-dependent protein deacylase 1.00 NOLOHH_05805 katG catalase/peroxidase HPI low > 75
Escherichia coli ECRC101 0.98 MCAODC_22800 cobB NAD-dependent protein deacylase 1.00 MCAODC_04160 katG catalase/peroxidase HPI low > 87
Escherichia coli ECRC98 0.98 JDDGAC_07100 cobB NAD-dependent protein deacylase 1.00 JDDGAC_17285 katG catalase/peroxidase HPI low > 86
Escherichia coli ECRC100 0.98 OKFHMN_03440 cobB NAD-dependent protein deacylase 1.00 OKFHMN_13660 katG catalase/peroxidase HPI low > 80
Escherichia coli Nissle 1917 0.98 ECOLIN_RS06455 Sir2 family NAD+-dependent deacetylase 1.00 ECOLIN_RS22765 catalase/peroxidase HPI — —
Escherichia fergusonii Becca 0.98 EFB2_02855 NAD-dependent protein deacylase 1.00 EFB2_04671 Catalase-peroxidase low > 86
Escherichia coli BW25113 0.87 b1120 cobB deacetylase of acs and cheY, regulates chemotaxis (NCBI) 1.00 b3942 katG catalase/hydroperoxidase HPI(I) (NCBI) low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.87 GFF3403 NAD-dependent protein deacetylase of SIR2 family 0.91 GFF2330 Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7) low > 78
Enterobacter asburiae PDN3 0.83 EX28DRAFT_1810 NAD-dependent protein deacetylases, SIR2 family 0.87 EX28DRAFT_4414 catalase/peroxidase HPI low > 76
Enterobacter sp. TBS_079 0.83 MPMX20_01801 NAD-dependent protein deacylase 0.87 MPMX20_04528 Catalase-peroxidase low > 85
Klebsiella michiganensis M5al 0.76 BWI76_RS11230 NAD-dependent deacylase 0.81 BWI76_RS13925 catalase/peroxidase HPI low > 92
Pantoea sp. MT58 0.75 IAI47_11950 NAD-dependent protein deacylase 0.80 IAI47_07215 catalase/peroxidase HPI low > 76
Pectobacterium carotovorum WPP14 0.73 HER17_RS08800 NAD-dependent protein deacylase 0.56 HER17_RS09165 catalase/peroxidase HPI low > 75
Serratia liquefaciens MT49 0.72 IAI46_10355 NAD-dependent protein deacylase 0.61 IAI46_17030 catalase/peroxidase HPI low > 86
Rahnella sp. WP5 0.72 EX31_RS24540 NAD-dependent protein deacylase 0.81 EX31_RS11140 catalase/peroxidase HPI low > 89
Dickeya dianthicola ME23 0.71 DZA65_RS13510 NAD-dependent protein deacylase 0.62 DZA65_RS08685 catalase/peroxidase HPI low > 75
Erwinia tracheiphila SCR3 0.70 LU632_RS14640 cobB NAD-dependent protein deacylase 0.81 LU632_RS19500 katG catalase/peroxidase HPI — —
Dickeya dianthicola 67-19 0.70 HGI48_RS13045 NAD-dependent protein deacylase 0.61 HGI48_RS08090 catalase/peroxidase HPI low > 71
Dickeya dadantii 3937 0.70 DDA3937_RS12975 NAD-dependent protein deacylase 0.61 DDA3937_RS07265 catalase/peroxidase HPI low > 74
Vibrio cholerae E7946 ATCC 55056 0.56 CSW01_07575 NAD-dependent protein deacylase 0.58 CSW01_07835 catalase-peroxidase low > 62
Alteromonas macleodii MIT1002 0.51 MIT1002_02145 NAD-dependent protein deacylase 0.51 MIT1002_03345 Catalase-peroxidase 2 precursor low > 70
Shewanella loihica PV-4 0.48 Shew_1662 NAD-dependent deacetylase (RefSeq) 0.50 Shew_0709 catalase/peroxidase HPI (RefSeq) low > 60
Shewanella sp. ANA-3 0.47 Shewana3_1717 NAD-dependent deacetylase (RefSeq) 0.54 Shewana3_0306 catalase/peroxidase HPI (RefSeq) — —
Shewanella amazonensis SB2B 0.46 Sama_1435 NAD-dependent deacetylase (RefSeq) 0.55 Sama_0745 catalase (RefSeq) low > 62
Azospirillum sp. SherDot2 0.46 MPMX19_02648 NAD-dependent protein deacylase 0.58 MPMX19_03084 Catalase-peroxidase low > 112
Shewanella oneidensis MR-1 0.46 SO1938 cobB cobB protein (NCBI ptt file) 0.55 SO4405 katG-2 catalase/peroxidase HPI (NCBI ptt file) low > 76
Brevundimonas sp. GW460-12-10-14-LB2 0.45 A4249_RS00415 NAD-dependent deacylase 0.63 A4249_RS12750 catalase/peroxidase HPI low > 48
Caulobacter crescentus NA1000 Δfur 0.43 CCNA_03594 SIR2 family protein 0.57 CCNA_03138 peroxidase/catalase katG low > 67
Caulobacter crescentus NA1000 0.43 CCNA_03594 SIR2 family protein 0.57 CCNA_03138 peroxidase/catalase katG low > 66
Sphingomonas koreensis DSMZ 15582 0.39 Ga0059261_1943 NAD-dependent protein deacetylases, SIR2 family 0.51 Ga0059261_3628 catalase/peroxidase HPI low > 68
Dinoroseobacter shibae DFL-12 0.35 Dshi_2612 Silent information regulator protein Sir2 (RefSeq) 0.50 Dshi_3801 catalase/peroxidase HPI (RefSeq) low > 64
Variovorax sp. SCN45 0.28 GFF3139 NAD-dependent protein deacetylase of SIR2 family 0.60 GFF4692 Catalase-peroxidase KatG (EC 1.11.1.21) low > 127
Pseudomonas fluorescens FW300-N2C3 0.27 AO356_23430 NAD-dependent deacetylase 0.61 AO356_07735 hydroperoxidase low > 104
Pseudomonas sp. S08-1 0.26 OH686_06015 NAD-dependent protein deacetylase of SIR2 family 0.69 OH686_15490 catalase/peroxidase HPI low > 80
Ralstonia solanacearum PSI07 0.25 RPSI07_RS18020 NAD-dependent deacylase 0.61 RPSI07_RS20110 catalase/peroxidase HPI low > 81
Ralstonia solanacearum IBSBF1503 0.25 RALBFv3_RS15355 NAD-dependent deacylase 0.61 RALBFv3_RS13105 catalase/peroxidase HPI low > 76
Ralstonia solanacearum UW163 0.25 UW163_RS12820 NAD-dependent deacylase 0.61 UW163_RS00460 catalase/peroxidase HPI — —
Acidovorax sp. GW101-3H11 0.25 Ac3H11_4140 NAD-dependent protein deacetylase of SIR2 family 0.58 Ac3H11_135 Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7) low > 79
Ralstonia sp. UNC404CL21Col 0.25 ABZR87_RS10995 NAD-dependent deacylase 0.66 ABZR87_RS01240 catalase/peroxidase HPI low > 80
Pseudomonas stutzeri RCH2 0.25 Psest_2405 NAD-dependent protein deacetylases, SIR2 family 0.58 Psest_2741 catalase/peroxidase HPI low > 67
Pseudomonas putida KT2440 0.25 PP_5402 deacetylase of acetyl-CoA synthetase, NAD-dependent 0.60 PP_3668 Catalase-peroxidase low > 96
Cupriavidus basilensis FW507-4G11 0.25 RR42_RS13055 NAD-dependent protein deacylase 0.61 RR42_RS26270 hydroperoxidase low > 128
Mycobacterium tuberculosis H37Rv 0.24 Rv1151c Transcriptional regulatory protein 0.51 Rv1908c Catalase-peroxidase-peroxynitritase T KatG low > 58
Burkholderia phytofirmans PsJN 0.16 BPHYT_RS29640 NAD-dependent deacetylase 0.62 BPHYT_RS10310 catalase-peroxidase low > 109
Paraburkholderia bryophila 376MFSha3.1 0.15 H281DRAFT_03044 NAD-dependent protein deacetylase, SIR2 family 0.60 H281DRAFT_00053 catalase-peroxidase — —
Paraburkholderia sabiae LMG 24235 0.15 QEN71_RS20510 NAD-dependent protein deacetylase 0.61 QEN71_RS29740 catalase/peroxidase HPI low > 153
Pseudomonas fluorescens FW300-N2E2 0.14 Pf6N2E2_2109 NAD-dependent protein deacetylase of SIR2 family 0.61 Pf6N2E2_3430 Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7) low > 103
Pseudomonas fluorescens FW300-N2E3 0.13 AO353_26795 NAD-dependent deacetylase 0.60 AO353_23210 hydroperoxidase low > 101

Not shown: 11 genomes with orthologs for ECD_01118 only; 21 genomes with orthologs for ECD_03828 only