Conservation of cofitness between ECD_03509 and ECD_03474 in Escherichia coli BL21

48 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_03509 ATP-dependent DNA helicase 1.0 ECD_03474 L-threonine 3-dehydrogenase, NAD(P)-binding 0.68 20
Escherichia coli BW25113 1.00 b3652 recG ATP-dependent DNA helicase (NCBI) 1.00 b3616 tdh L-threonine 3-dehydrogenase (NCBI) 0.32 46
Escherichia coli ECRC62 1.00 BNILDI_04090 recG ATP-dependent DNA helicase RecG 1.00 BNILDI_03920 tdh L-threonine 3-dehydrogenase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00049 ATP-dependent DNA helicase RecG 1.00 OHPLBJKB_00083 L-threonine 3-dehydrogenase low > 73
Escherichia coli Nissle 1917 0.99 ECOLIN_RS20800 ATP-dependent DNA helicase RecG 1.00 ECOLIN_RS20635 L-threonine 3-dehydrogenase low > 52
Escherichia fergusonii Becca 0.99 EFB2_00136 ATP-dependent DNA helicase RecG 1.00 EFB2_00194 L-threonine 3-dehydrogenase low > 86
Escherichia coli ECOR27 0.99 NOLOHH_07425 recG ATP-dependent DNA helicase RecG 1.00 NOLOHH_07595 tdh L-threonine 3-dehydrogenase low > 57
Escherichia coli ECRC101 0.99 OKFHMN_15545 recG ATP-dependent DNA helicase RecG 1.00 OKFHMN_15715 tdh L-threonine 3-dehydrogenase — —
Escherichia coli ECRC98 0.99 JDDGAC_19170 recG ATP-dependent DNA helicase RecG 1.00 JDDGAC_19340 tdh L-threonine 3-dehydrogenase — —
Escherichia coli ECRC99 0.99 KEDOAH_12600 recG ATP-dependent DNA helicase RecG 1.00 KEDOAH_12435 tdh L-threonine 3-dehydrogenase — —
Escherichia coli ECRC102 0.99 NIAGMN_13305 recG ATP-dependent DNA helicase RecG 1.00 NIAGMN_13475 tdh L-threonine 3-dehydrogenase — —
Escherichia coli ECRC101 0.99 MCAODC_06055 recG ATP-dependent DNA helicase RecG 1.00 MCAODC_06225 tdh L-threonine 3-dehydrogenase — —
Escherichia coli ECOR38 0.99 HEPCGN_14365 recG ATP-dependent DNA helicase RecG 1.00 HEPCGN_14555 tdh L-threonine 3-dehydrogenase low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.94 GFF355 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.98 GFF394 L-threonine 3-dehydrogenase (EC 1.1.1.103) low > 78
Enterobacter asburiae PDN3 0.93 EX28DRAFT_3901 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.97 EX28DRAFT_3869 L-threonine 3-dehydrogenase (EC 1.1.1.103) low > 76
Enterobacter sp. TBS_079 0.92 MPMX20_00084 ATP-dependent DNA helicase RecG 0.97 MPMX20_00116 L-threonine 3-dehydrogenase low > 85
Klebsiella michiganensis M5al 0.91 BWI76_RS27440 DNA helicase RecG 0.98 BWI76_RS27250 L-threonine 3-dehydrogenase low > 92
Pantoea sp. MT58 0.84 IAI47_00500 ATP-dependent DNA helicase RecG 0.90 IAI47_00700 L-threonine 3-dehydrogenase low > 76
Serratia liquefaciens MT49 0.84 IAI46_24905 ATP-dependent DNA helicase RecG 0.95 IAI46_24725 L-threonine 3-dehydrogenase low > 86
Pectobacterium carotovorum WPP14 0.82 HER17_RS21395 ATP-dependent DNA helicase RecG 0.89 HER17_RS20760 L-threonine 3-dehydrogenase low > 75
Dickeya dadantii 3937 0.80 DDA3937_RS00170 ATP-dependent DNA helicase RecG 0.86 DDA3937_RS20430 L-threonine 3-dehydrogenase low > 74
Rahnella sp. WP5 0.80 EX31_RS15820 ATP-dependent DNA helicase RecG 0.91 EX31_RS14385 L-threonine 3-dehydrogenase low > 89
Vibrio cholerae E7946 ATCC 55056 0.66 CSW01_13680 DNA helicase RecG 0.90 CSW01_18565 L-threonine 3-dehydrogenase low > 62
Shewanella amazonensis SB2B 0.65 Sama_3375 ATP-dependent DNA helicase RecG (RefSeq) 0.90 Sama_0097 tdh L-threonine 3-dehydrogenase (RefSeq) low > 62
Shewanella sp. ANA-3 0.65 Shewana3_0348 ATP-dependent DNA helicase RecG (RefSeq) 0.89 Shewana3_4105 tdh L-threonine 3-dehydrogenase (RefSeq) low > 73
Shewanella loihica PV-4 0.64 Shew_3507 ATP-dependent DNA helicase RecG (RefSeq) 0.89 Shew_3710 tdh L-threonine 3-dehydrogenase (RefSeq) low > 60
Shewanella oneidensis MR-1 0.64 SO4364 recG ATP-dependent DNA helicase RecG (NCBI ptt file) 0.90 SO4673 tdh threonine 3-dehydrogenase (NCBI ptt file) low > 76
Alteromonas macleodii MIT1002 0.62 MIT1002_00111 ATP-dependent DNA helicase RecG 0.88 MIT1002_00064 L-threonine 3-dehydrogenase low > 70
Pseudomonas simiae WCS417 0.55 PS417_27870 ATP-dependent DNA helicase RecG 0.20 PS417_15850 alcohol dehydrogenase low > 88
Lysobacter sp. OAE881 0.53 ABIE51_RS17230 ATP-dependent DNA helicase RecG 0.67 ABIE51_RS06140 L-threonine 3-dehydrogenase low > 62
Dyella japonica UNC79MFTsu3.2 0.52 ABZR86_RS11840 ATP-dependent DNA helicase RecG 0.67 ABZR86_RS08385 L-threonine 3-dehydrogenase low > 74
Rhodanobacter denitrificans MT42 0.51 LRK55_RS11530 ATP-dependent DNA helicase RecG 0.68 LRK55_RS00420 L-threonine 3-dehydrogenase low > 63
Rhodanobacter sp. FW510-T8 0.51 OKGIIK_12090 recG ATP-dependent DNA helicase RecG 0.68 OKGIIK_06605 tdh L-threonine 3-dehydrogenase low > 52
Rhodanobacter denitrificans FW104-10B01 0.51 LRK54_RS11805 ATP-dependent DNA helicase RecG 0.68 LRK54_RS00650 L-threonine 3-dehydrogenase low > 59
Xanthomonas campestris pv. campestris strain 8004 0.51 Xcc-8004.1204.1 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.66 Xcc-8004.4082.1 L-threonine 3-dehydrogenase (EC 1.1.1.103) low > 74
Kangiella aquimarina DSM 16071 0.48 B158DRAFT_0566 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.79 B158DRAFT_0285 L-threonine 3-dehydrogenase (EC 1.1.1.103) low > 40
Burkholderia phytofirmans PsJN 0.45 BPHYT_RS03400 ATP-dependent DNA helicase RecG 0.80 BPHYT_RS34650 l-threonine 3-dehydrogenase low > 109
Paraburkholderia graminis OAS925 0.45 ABIE53_000833 ATP-dependent DNA helicase RecG 0.78 ABIE53_004673 threonine 3-dehydrogenase low > 113
Paraburkholderia bryophila 376MFSha3.1 0.45 H281DRAFT_04672 ATP-dependent DNA helicase RecG 0.79 H281DRAFT_03586 L-threonine 3-dehydrogenase low > 103
Paraburkholderia sabiae LMG 24235 0.45 QEN71_RS26630 ATP-dependent DNA helicase RecG 0.80 QEN71_RS16540 L-threonine 3-dehydrogenase — —
Cupriavidus basilensis FW507-4G11 0.44 RR42_RS17390 ATP-dependent DNA helicase RecG 0.80 RR42_RS22860 l-threonine 3-dehydrogenase low > 128
Castellaniella sp019104865 MT123 0.43 ABCV34_RS03570 ATP-dependent DNA helicase RecG 0.79 ABCV34_RS14100 L-threonine 3-dehydrogenase low > 48
Hydrogenophaga sp. GW460-11-11-14-LB1 0.41 GFF2802 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.22 GFF1899 L-threonine 3-dehydrogenase (EC 1.1.1.103) low > 90
Rhizobium sp. OAE497 0.34 ABIE40_RS09300 ATP-dependent DNA helicase RecG 0.73 ABIE40_RS12725 L-threonine 3-dehydrogenase low > 107
Phaeobacter inhibens DSM 17395 0.34 PGA1_c14380 ATP-dependent DNA helicase RecG 0.59 PGA1_c34320 L-threonine 3-dehydrogenase (EC 1.1.1.103) (from data) low > 62
Sinorhizobium meliloti 1021 0.33 SMc00228 ATP-dependent DNA helicase RecG 0.73 SMc01564 L-threonine 3-dehydrogenase low > 103
Sphingomonas koreensis DSMZ 15582 0.30 Ga0059261_0958 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.58 Ga0059261_2605 Threonine dehydrogenase and related Zn-dependent dehydrogenases low > 68
Rhodopseudomonas palustris CGA009 0.30 TX73_013795 ATP-dependent DNA helicase RecG 0.16 TX73_000550 zinc-binding dehydrogenase low > 86
Brevundimonas sp. GW460-12-10-14-LB2 0.28 A4249_RS04765 ATP-dependent DNA helicase RecG 0.57 A4249_RS02510 L-threonine 3-dehydrogenase low > 48

Not shown: 49 genomes with orthologs for ECD_03509 only; 0 genomes with orthologs for ECD_03474 only