Conservation of cofitness between ECD_02179 and ECD_02677 in Escherichia coli BL21

53 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_02179 uridine 5'-(beta-1-threo-pentapyranosyl-4-ulose diphosphate) aminotransferase, PLP-dependent 1.0 ECD_02677 PEP-protein phosphotransferase enzyme I; GAF domain containing protein 0.82 7
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_01458 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase 1.00 OHPLBJKB_00901 Phosphoenolpyruvate-dependent phosphotransferase system low > 73
Escherichia coli ECRC62 1.00 BNILDI_13535 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase 1.00 BNILDI_10370 ptsP phosphoenolpyruvate--protein phosphotransferase low > 75
Escherichia coli ECOR27 0.99 NOLOHH_14620 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase 1.00 NOLOHH_11890 ptsP phosphoenolpyruvate--protein phosphotransferase low > 75
Escherichia coli ECOR38 0.99 HEPCGN_22210 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase 1.00 HEPCGN_19260 ptsP phosphoenolpyruvate--protein phosphotransferase low > 87
Escherichia coli BW25113 0.99 b2253 arnB uridine 5'-(beta-1-threo-pentapyranosyl-4-ulose diphosphate) aminotransferase, PLP-dependent (RefSeq) 1.00 b2829 ptsP fused PTS enzyme: PEP-protein phosphotransferase (enzyme I)/GAF domain containing protein (NCBI) low > 76
Escherichia coli Nissle 1917 0.97 ECOLIN_RS13125 UDP-4-amino-4-deoxy-L-arabinose aminotransferase 1.00 ECOLIN_RS15875 phosphoenolpyruvate--protein phosphotransferase low > 55
Escherichia coli ECRC100 0.95 OKFHMN_22995 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase 1.00 OKFHMN_20005 ptsP phosphoenolpyruvate--protein phosphotransferase low > 80
Escherichia coli ECRC101 0.95 MCAODC_14035 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase 1.00 MCAODC_10530 ptsP phosphoenolpyruvate--protein phosphotransferase low > 87
Escherichia coli ECRC102 0.95 NIAGMN_20765 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase 1.00 NIAGMN_17775 ptsP phosphoenolpyruvate--protein phosphotransferase
Escherichia coli ECRC99 0.95 KEDOAH_05200 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase 1.00 KEDOAH_08125 ptsP phosphoenolpyruvate--protein phosphotransferase
Escherichia coli ECRC98 0.95 JDDGAC_26960 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase 1.00 JDDGAC_23670 ptsP phosphoenolpyruvate--protein phosphotransferase 0.73 57
Escherichia fergusonii Becca 0.95 EFB2_01603 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase 1.00 EFB2_01055 Phosphoenolpyruvate-dependent phosphotransferase system low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.84 GFF1858 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase (EC 2.6.1.-) 0.96 GFF1311 FIG001592: Phosphocarrier protein kinase/phosphorylase, nitrogen regulation associated low > 78
Enterobacter sp. TBS_079 0.81 MPMX20_04380 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase 0.94 MPMX20_03692 Phosphoenolpyruvate-dependent phosphotransferase system low > 85
Enterobacter asburiae PDN3 0.81 EX28DRAFT_4082 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis 0.94 EX28DRAFT_2904 phosphoenolpyruvate-protein phosphotransferase low > 76
Klebsiella michiganensis M5al 0.79 BWI76_RS26485 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase 0.89 BWI76_RS23270 phosphoenolpyruvate--protein phosphotransferase PtsP low > 92
Erwinia tracheiphila SCR3 0.78 LU632_RS16495 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.81 LU632_RS06110 ptsP phosphoenolpyruvate--protein phosphotransferase low > 74
Dickeya dadantii 3937 0.78 DDA3937_RS21390 UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.74 DDA3937_RS04950 phosphoenolpyruvate--protein phosphotransferase low > 74
Dickeya dianthicola ME23 0.77 DZA65_RS22610 UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.73 DZA65_RS05300 phosphoenolpyruvate--protein phosphotransferase low > 75
Dickeya dianthicola 67-19 0.77 HGI48_RS21625 UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.73 HGI48_RS04960 phosphoenolpyruvate--protein phosphotransferase low > 71
Pectobacterium carotovorum WPP14 0.72 HER17_RS06520 UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.74 HER17_RS16580 phosphoenolpyruvate--protein phosphotransferase low > 75
Pantoea sp. MT58 0.71 IAI47_21625 UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.80 IAI47_03920 phosphoenolpyruvate--protein phosphotransferase low > 76
Serratia liquefaciens MT49 0.71 IAI46_11015 UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.84 IAI46_20450 phosphoenolpyruvate--protein phosphotransferase low > 86
Rahnella sp. WP5 0.70 EX31_RS14020 UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.79 EX31_RS13200 phosphoenolpyruvate--protein phosphotransferase low > 89
Pseudomonas fluorescens FW300-N2E3 0.69 AO353_25530 UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase 0.39 AO353_08465 phosphoenolpyruvate-protein phosphotransferase low > 101
Pseudomonas syringae pv. syringae B728a ΔmexB 0.63 Psyr_2689 DegT/DnrJ/EryC1/StrS aminotransferase 0.39 Psyr_4842 Phosphoenolpyruvate-protein phosphotransferase low > 86
Pseudomonas syringae pv. syringae B728a 0.63 Psyr_2689 DegT/DnrJ/EryC1/StrS aminotransferase 0.39 Psyr_4842 Phosphoenolpyruvate-protein phosphotransferase low > 86
Rhodospirillum rubrum S1H 0.31 Rru_A2746 DegT/DnrJ/EryC1/StrS aminotransferase (NCBI) 0.23 Rru_A0745 PTSINtr with GAF domain, PtsP (NCBI) low > 58
Pseudomonas simiae WCS417 0.31 PS417_27245 aminotransferase DegT 0.39 PS417_26985 phosphoenolpyruvate-protein phosphotransferase low > 88
Pseudomonas fluorescens SBW25 0.31 PFLU_RS28905 DegT/DnrJ/EryC1/StrS aminotransferase family protein 0.39 PFLU_RS28645 phosphoenolpyruvate--protein phosphotransferase 0.76 48
Pseudomonas fluorescens SBW25-INTG 0.31 PFLU_RS28905 DegT/DnrJ/EryC1/StrS aminotransferase family protein 0.39 PFLU_RS28645 phosphoenolpyruvate--protein phosphotransferase low > 109
Caulobacter crescentus NA1000 Δfur 0.30 CCNA_00234 WecE-family cell wall biogenesis enzyme 0.25 CCNA_00892 phosphoenolpyruvate-protein phosphotransferase PtsP low > 67
Caulobacter crescentus NA1000 0.30 CCNA_00234 WecE-family cell wall biogenesis enzyme 0.25 CCNA_00892 phosphoenolpyruvate-protein phosphotransferase PtsP low > 66
Magnetospirillum magneticum AMB-1 0.30 AMB_RS00560 DegT/DnrJ/EryC1/StrS family aminotransferase 0.25 AMB_RS08150 phosphoenolpyruvate--protein phosphotransferase
Azospirillum brasilense Sp245 0.30 AZOBR_RS33710 putative aminotransferase 0.24 AZOBR_RS18900 peptidase low > 97
Pseudomonas stutzeri RCH2 0.29 Psest_1811 UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase 0.40 Psest_3862 phosphoenolpyruvate-protein phosphotransferase
Pseudomonas fluorescens FW300-N1B4 0.29 Pf1N1B4_3586 DegT/DnrJ/EryC1/StrS aminotransferase 0.39 Pf1N1B4_2284 FIG001592: Phosphocarrier protein kinase/phosphorylase, nitrogen regulation associated low > 87
Pseudomonas sp. RS175 0.29 PFR28_00919 UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase 0.39 PFR28_04830 Phosphoenolpyruvate-dependent phosphotransferase system
Marinobacter adhaerens HP15 0.28 HP15_2398 aminotransferase, DegT/DnrJ/EryC1/StrS family 0.41 HP15_463 fused phosphoenolpyruvate-protein phosphotransferase PtsP/GAF domain protein
Pseudomonas fluorescens FW300-N2E2 0.27 Pf6N2E2_2610 Bacillosamine/Legionaminic acid biosynthesis aminotransferase PglE; 4-keto-6-deoxy-N-Acetyl-D-hexosaminyl-(Lipid carrier) aminotransferase 0.39 Pf6N2E2_3942 FIG001592: Phosphocarrier protein kinase/phosphorylase, nitrogen regulation associated low > 103
Shewanella sp. ANA-3 0.27 Shewana3_1303 polysaccharide biosynthesis protein (RefSeq) 0.40 Shewana3_3042 phosphoenolpyruvate-protein phosphotransferase PtsP (RefSeq) low > 73
Pseudomonas fluorescens GW456-L13 0.26 PfGW456L13_4370 Bacillosamine/Legionaminic acid biosynthesis aminotransferase PglE; 4-keto-6-deoxy-N-Acetyl-D-hexosaminyl-(Lipid carrier) aminotransferase 0.39 PfGW456L13_953 FIG001592: Phosphocarrier protein kinase/phosphorylase, nitrogen regulation associated low > 87
Shewanella loihica PV-4 0.25 Shew_1319 DegT/DnrJ/EryC1/StrS aminotransferase (RefSeq) 0.38 Shew_1039 phosphoenolpyruvate-protein phosphotransferase PtsP (RefSeq) low > 60
Alteromonas macleodii MIT1002 0.25 MIT1002_01078 UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase 0.41 MIT1002_00648 Phosphoenolpyruvate-protein phosphotransferase low > 70
Shewanella oneidensis MR-1 0.24 SO3270 polysaccharide biosynthesis protein (NCBI ptt file) 0.40 SO1332 ptsP phosphoenolpyruvate-protein phosphotransferase PtsP (NCBI ptt file) low > 76
Pseudomonas fluorescens FW300-N2C3 0.24 AO356_03400 aminotransferase DegT 0.39 AO356_10350 phosphoenolpyruvate-protein phosphotransferase low > 104
Phaeobacter inhibens DSM 17395 0.23 PGA1_c05070 putative pyridoxal-phosphate-dependent aminotransferase 0.21 PGA1_c23500 phosphoenolpyruvate-protein phosphotransferase PtsP low > 62
Sphingomonas koreensis DSMZ 15582 0.22 Ga0059261_3110 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis 0.23 Ga0059261_2514 phosphoenolpyruvate-protein phosphotransferase
Rhodopseudomonas palustris CGA009 0.20 TX73_020615 DegT/DnrJ/EryC1/StrS family aminotransferase 0.26 TX73_003130 phosphoenolpyruvate--protein phosphotransferase
Acinetobacter radioresistens SK82 0.19 MPMX26_00061 GDP-perosamine synthase 0.35 MPMX26_00341 Phosphoenolpyruvate-dependent phosphotransferase system low > 36
Brevundimonas sp. GW460-12-10-14-LB2 0.19 A4249_RS13795 DegT/DnrJ/EryC1/StrS aminotransferase family protein 0.24 A4249_RS14485 phosphoenolpyruvate--protein phosphotransferase
Sinorhizobium meliloti 1021 0.18 SM_b21248 aminotransferase 0.25 SMc02437 phosphoenolpyruvate phosphotransferase PTSP (enzyme I-Ntr) protein
Dinoroseobacter shibae DFL-12 0.14 Dshi_2228 DegT/DnrJ/EryC1/StrS aminotransferase (RefSeq) 0.21 Dshi_2062 PTSINtr with GAF domain, PtsP (RefSeq) low > 64

Not shown: 33 genomes with orthologs for ECD_02179 only; 8 genomes with orthologs for ECD_02677 only