Conservation of cofitness between ECD_02301 and ECD_02583 in Escherichia coli BL21

61 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_02301 manganese/divalent cation transporter 1.0 ECD_02583 methyl-directed mismatch repair protein low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_01330 Divalent metal cation transporter MntH 1.00 OHPLBJKB_01000 DNA mismatch repair protein MutS low > 73
Escherichia coli Nissle 1917 1.00 ECOLIN_RS13755 Nramp family divalent metal transporter 0.99 ECOLIN_RS15275 DNA mismatch repair protein MutS low > 55
Escherichia coli ECRC101 1.00 MCAODC_12840 mntH Mn(2+) uptake NRAMP transporter MntH 1.00 MCAODC_11050 mutS DNA mismatch repair protein MutS low > 87
Escherichia coli ECOR38 1.00 HEPCGN_21515 mntH Mn(2+) uptake NRAMP transporter MntH 0.99 HEPCGN_19705 mutS DNA mismatch repair protein MutS low > 87
Escherichia coli ECOR27 1.00 NOLOHH_13995 mntH Mn(2+) uptake NRAMP transporter MntH 1.00 NOLOHH_12370 mutS DNA mismatch repair protein MutS low > 75
Escherichia coli ECRC100 1.00 OKFHMN_22310 mntH Mn(2+) uptake NRAMP transporter MntH 1.00 OKFHMN_20525 mutS DNA mismatch repair protein MutS low > 80
Escherichia coli ECRC98 1.00 JDDGAC_26275 mntH Mn(2+) uptake NRAMP transporter MntH 1.00 JDDGAC_24190 mutS DNA mismatch repair protein MutS low > 86
Escherichia coli ECRC102 1.00 NIAGMN_20085 mntH Mn(2+) uptake NRAMP transporter MntH 1.00 NIAGMN_18295 mutS DNA mismatch repair protein MutS — —
Escherichia coli ECRC99 1.00 KEDOAH_05910 mntH Mn(2+) uptake NRAMP transporter MntH 1.00 KEDOAH_07610 mutS DNA mismatch repair protein MutS — —
Escherichia coli BW25113 1.00 b2392 mntH manganese transport protein MntH (NCBI) 1.00 b2733 mutS DNA mismatch repair protein (NCBI) low > 76
Escherichia coli ECRC62 1.00 BNILDI_12845 mntH Mn(2+) uptake NRAMP transporter MntH 1.00 BNILDI_10920 mutS DNA mismatch repair protein MutS low > 75
Escherichia fergusonii Becca 1.00 EFB2_01483 Divalent metal cation transporter MntH 0.98 EFB2_01179 DNA mismatch repair protein MutS low > 86
Enterobacter asburiae PDN3 0.92 EX28DRAFT_0232 NRAMP (natural resistance-associated macrophage protein) metal ion transporters 0.92 EX28DRAFT_2829 DNA mismatch repair protein MutS low > 76
Enterobacter sp. TBS_079 0.92 MPMX20_03286 Divalent metal cation transporter MntH 0.92 MPMX20_03619 DNA mismatch repair protein MutS low > 85
Klebsiella michiganensis M5al 0.90 BWI76_RS20535 manganese transporter MntH 0.92 BWI76_RS22600 DNA mismatch repair protein MutS — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.89 GFF1977 Manganese transport protein MntH 0.93 GFF4773 DNA mismatch repair protein MutS low > 78
Dickeya dadantii 3937 0.79 DDA3937_RS04340 Nramp family divalent metal transporter 0.85 DDA3937_RS05230 DNA mismatch repair protein MutS low > 74
Dickeya dianthicola ME23 0.79 DZA65_RS04255 divalent metal cation transporter 0.85 DZA65_RS05570 DNA mismatch repair protein MutS low > 75
Dickeya dianthicola 67-19 0.79 HGI48_RS04335 Nramp family divalent metal transporter 0.85 HGI48_RS05230 DNA mismatch repair protein MutS low > 71
Pectobacterium carotovorum WPP14 0.79 HER17_RS17405 Nramp family divalent metal transporter 0.84 HER17_RS16220 DNA mismatch repair protein MutS low > 75
Pantoea sp. MT58 0.78 IAI47_05535 Nramp family divalent metal transporter 0.82 IAI47_04240 DNA mismatch repair protein MutS low > 76
Serratia liquefaciens MT49 0.77 IAI46_18255 Nramp family divalent metal transporter 0.85 IAI46_03800 DNA mismatch repair protein MutS low > 86
Rahnella sp. WP5 0.77 EX31_RS20075 Mn(2+) uptake NRAMP transporter MntH 0.84 EX31_RS07820 DNA mismatch repair protein MutS low > 89
Erwinia tracheiphila SCR3 0.72 LU632_RS06525 Nramp family divalent metal transporter 0.84 LU632_RS06485 mutS DNA mismatch repair protein MutS low > 74
Ralstonia sp. UNC404CL21Col 0.38 ABZR87_RS21390 Nramp family divalent metal transporter 0.49 ABZR87_RS10580 DNA mismatch repair protein MutS low > 80
Burkholderia phytofirmans PsJN 0.38 BPHYT_RS05140 manganese transporter 0.48 BPHYT_RS12475 DNA mismatch repair protein MutS low > 109
Herbaspirillum seropedicae SmR1 0.37 HSERO_RS10500 manganese transporter 0.49 HSERO_RS16360 DNA mismatch repair protein MutS low > 78
Azospirillum sp. SherDot2 0.37 MPMX19_03690 Divalent metal cation transporter MntH 0.33 MPMX19_00908 DNA mismatch repair protein MutS low > 112
Agrobacterium fabrum C58 0.35 Atu1736 manganese transport protein 0.32 Atu0345 DNA mismatch repair protein, MutS family low > 89
Ralstonia solanacearum IBSBF1503 0.34 RALBFv3_RS21155 divalent metal cation transporter 0.49 RALBFv3_RS14920 DNA mismatch repair protein MutS low > 76
Ralstonia solanacearum GMI1000 0.34 RS_RS19660 divalent metal cation transporter 0.49 RS_RS05735 DNA mismatch repair protein MutS low > 80
Pseudomonas simiae WCS417 0.34 PS417_11460 divalent metal cation transporter MntH 0.58 PS417_05680 DNA mismatch repair protein MutS low > 88
Ralstonia solanacearum UW163 0.34 UW163_RS22295 divalent metal cation transporter 0.49 UW163_RS12390 DNA mismatch repair protein MutS — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.34 Psyr_2305 Natural resistance-associated macrophage protein 0.57 Psyr_1376 DNA mismatch repair protein MutS low > 86
Pseudomonas syringae pv. syringae B728a 0.34 Psyr_2305 Natural resistance-associated macrophage protein 0.57 Psyr_1376 DNA mismatch repair protein MutS low > 86
Ralstonia solanacearum PSI07 0.34 RPSI07_RS01990 divalent metal cation transporter 0.49 RPSI07_RS18440 DNA mismatch repair protein MutS low > 81
Pseudomonas fluorescens SBW25 0.34 PFLU_RS12040 divalent metal cation transporter 0.57 PFLU_RS05765 DNA mismatch repair protein MutS low > 109
Pseudomonas fluorescens SBW25-INTG 0.34 PFLU_RS12040 divalent metal cation transporter 0.57 PFLU_RS05765 DNA mismatch repair protein MutS low > 109
Variovorax sp. SCN45 0.34 GFF7172 Manganese transport protein MntH 0.44 GFF6634 DNA mismatch repair protein MutS low > 127
Rhodopseudomonas palustris CGA009 0.34 TX73_014020 Nramp family divalent metal transporter 0.32 TX73_002655 DNA mismatch repair protein MutS low > 86
Paraburkholderia bryophila 376MFSha3.1 0.33 H281DRAFT_03197 manganese transport protein 0.49 H281DRAFT_00537 DNA mismatch repair protein MutS low > 103
Paraburkholderia sabiae LMG 24235 0.33 QEN71_RS20115 Nramp family divalent metal transporter 0.47 QEN71_RS06085 DNA mismatch repair protein MutS low > 153
Rhizobium sp. OAE497 0.33 ABIE40_RS05385 Nramp family divalent metal transporter 0.31 ABIE40_RS01775 DNA mismatch repair protein MutS low > 107
Xanthomonas campestris pv. campestris strain 8004 0.32 Xcc-8004.2406.1 Manganese transport protein MntH 0.51 Xcc-8004.3760.1 DNA mismatch repair protein MutS low > 74
Paraburkholderia graminis OAS925 0.31 ABIE53_002372 manganese transport protein 0.49 ABIE53_002719 DNA mismatch repair protein MutS low > 113
Cupriavidus basilensis FW507-4G11 0.27 RR42_RS16785 manganese transporter 0.49 RR42_RS06285 DNA mismatch repair protein MutS low > 128
Bacteroides stercoris CC31F 0.22 HMPREF1181_RS16610 Nramp family divalent metal transporter 0.36 HMPREF1181_RS01980 DNA mismatch repair protein MutS low > 56
Bacteroides ovatus ATCC 8483 0.22 BACOVA_02251 metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 0.36 BACOVA_02824 DNA mismatch repair protein MutS low > 94
Desulfovibrio vulgaris Miyazaki F 0.22 DvMF_0379 natural resistance-associated macrophage protein (RefSeq) 0.32 DvMF_0355 DNA mismatch repair protein MutS (RefSeq) low > 51
Phocaeicola dorei CL03T12C01 0.22 ABI39_RS14005 Nramp family divalent metal transporter 0.36 ABI39_RS05500 DNA mismatch repair protein MutS low > 72
Bacteroides thetaiotaomicron VPI-5482 0.22 BT0629 Mn2+ and Fe2+ transport protein (NCBI ptt file) 0.36 BT3121 DNA mismatch repair protein mutS (NCBI ptt file) low > 81
Parabacteroides merdae CL09T00C40 0.22 HMPREF1078_RS08610 Nramp family divalent metal transporter 0.35 HMPREF1078_RS06455 DNA mismatch repair protein MutS low > 61
Phocaeicola vulgatus CL09T03C04 0.22 HMPREF1058_RS17790 Nramp family divalent metal transporter 0.36 HMPREF1058_RS11435 DNA mismatch repair protein MutS low > 67
Kangiella aquimarina DSM 16071 0.16 B158DRAFT_1995 Mn2+ and Fe2+ transporters of the NRAMP family 0.52 B158DRAFT_1529 DNA mismatch repair protein MutS low > 40
Alteromonas macleodii MIT1002 0.15 MIT1002_03176 Divalent metal cation transporter MntH 0.63 MIT1002_00953 DNA mismatch repair protein MutS low > 70
Echinicola vietnamensis KMM 6221, DSM 17526 0.12 Echvi_3011 Mn2+ and Fe2+ transporters of the NRAMP family 0.35 Echvi_0960 DNA mismatch repair protein MutS low > 79
Rhodanobacter sp. FW510-T8 0.11 OKGIIK_05150 Iron transporter 0.53 OKGIIK_03705 mutS DNA mismatch repair protein MutS low > 52
Sinorhizobium meliloti 1021 0.10 SMa1115 Mn2+/Fe2+ transporter NRAMP family 0.31 SMc01125 DNA mismatch repair protein MutS low > 103
Rhodanobacter denitrificans MT42 0.10 LRK55_RS17625 divalent metal cation transporter 0.54 LRK55_RS14650 DNA mismatch repair protein MutS low > 63
Rhodanobacter denitrificans FW104-10B01 0.10 LRK54_RS17405 divalent metal cation transporter 0.53 LRK54_RS14935 DNA mismatch repair protein MutS low > 59
Variovorax sp. OAS795 0.09 ABID97_RS22130 divalent metal cation transporter 0.43 ABID97_RS20815 DNA mismatch repair protein MutS low > 91

Not shown: 2 genomes with orthologs for ECD_02301 only; 38 genomes with orthologs for ECD_02583 only