Conservation of cofitness between ECD_00008 and ECD_02179 in Escherichia coli BL21

53 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_00008 transaldolase B 1.0 ECD_02179 uridine 5'-(beta-1-threo-pentapyranosyl-4-ulose diphosphate) aminotransferase, PLP-dependent 0.69 1
Escherichia coli ECOR27 1.00 NOLOHH_03410 transaldolase B 0.99 NOLOHH_14620 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_03652 Transaldolase 1.00 OHPLBJKB_01458 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase low > 73
Escherichia coli BW25113 1.00 b0008 talB transaldolase B (NCBI) 0.99 b2253 arnB uridine 5'-(beta-1-threo-pentapyranosyl-4-ulose diphosphate) aminotransferase, PLP-dependent (RefSeq) low > 76
Escherichia coli ECRC99 1.00 KEDOAH_17075 transaldolase B 0.95 KEDOAH_05200 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase — —
Escherichia coli ECRC98 1.00 JDDGAC_14675 transaldolase B 0.95 JDDGAC_26960 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase low > 86
Escherichia coli ECRC101 1.00 MCAODC_01595 transaldolase B 0.95 MCAODC_14035 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase low > 87
Escherichia coli ECRC100 1.00 OKFHMN_11080 transaldolase B 0.95 OKFHMN_22995 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase low > 80
Escherichia coli ECRC62 1.00 BNILDI_08195 transaldolase B 1.00 BNILDI_13535 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase low > 75
Escherichia coli ECRC102 1.00 NIAGMN_08930 transaldolase B 0.95 NIAGMN_20765 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase — —
Escherichia coli Nissle 1917 1.00 ECOLIN_RS00045 transaldolase 0.97 ECOLIN_RS13125 UDP-4-amino-4-deoxy-L-arabinose aminotransferase low > 55
Escherichia fergusonii Becca 1.00 EFB2_04035 Transaldolase B 0.95 EFB2_01603 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase low > 86
Escherichia coli ECOR38 1.00 HEPCGN_09085 transaldolase B 0.99 HEPCGN_22210 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase low > 87
Klebsiella michiganensis M5al 0.96 BWI76_RS04270 transaldolase 0.79 BWI76_RS26485 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.96 GFF1083 Transaldolase (EC 2.2.1.2) 0.84 GFF1858 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase (EC 2.6.1.-) low > 78
Enterobacter sp. TBS_079 0.96 MPMX20_00716 Transaldolase B 0.81 MPMX20_04380 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase low > 85
Enterobacter asburiae PDN3 0.96 EX28DRAFT_3620 transaldolase 0.81 EX28DRAFT_4082 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis low > 76
Pectobacterium carotovorum WPP14 0.92 HER17_RS02815 transaldolase 0.72 HER17_RS06520 UDP-4-amino-4-deoxy-L-arabinose aminotransferase low > 75
Dickeya dianthicola ME23 0.92 DZA65_RS19465 transaldolase 0.77 DZA65_RS22610 UDP-4-amino-4-deoxy-L-arabinose aminotransferase low > 75
Dickeya dadantii 3937 0.92 DDA3937_RS18395 transaldolase 0.78 DDA3937_RS21390 UDP-4-amino-4-deoxy-L-arabinose aminotransferase low > 74
Serratia liquefaciens MT49 0.91 IAI46_03055 transaldolase 0.71 IAI46_11015 UDP-4-amino-4-deoxy-L-arabinose aminotransferase low > 86
Dickeya dianthicola 67-19 0.91 HGI48_RS18325 transaldolase 0.77 HGI48_RS21625 UDP-4-amino-4-deoxy-L-arabinose aminotransferase low > 71
Pantoea sp. MT58 0.90 IAI47_16195 transaldolase 0.71 IAI47_21625 UDP-4-amino-4-deoxy-L-arabinose aminotransferase low > 76
Rahnella sp. WP5 0.90 EX31_RS03920 transaldolase 0.70 EX31_RS14020 UDP-4-amino-4-deoxy-L-arabinose aminotransferase low > 89
Erwinia tracheiphila SCR3 0.88 LU632_RS02630 tal transaldolase 0.78 LU632_RS16495 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase low > 74
Shewanella sp. ANA-3 0.71 Shewana3_3147 transaldolase B (RefSeq) 0.27 Shewana3_1303 polysaccharide biosynthesis protein (RefSeq) — —
Shewanella oneidensis MR-1 0.71 SO3546 tal transaldolase (NCBI ptt file) 0.24 SO3270 polysaccharide biosynthesis protein (NCBI ptt file) — —
Shewanella loihica PV-4 0.70 Shew_1089 transaldolase B (RefSeq) 0.25 Shew_1319 DegT/DnrJ/EryC1/StrS aminotransferase (RefSeq) — —
Alteromonas macleodii MIT1002 0.69 MIT1002_03080 Transaldolase B 0.25 MIT1002_01078 UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase — —
Dyella japonica UNC79MFTsu3.2 0.65 ABZR86_RS12545 transaldolase 0.21 ABZR86_RS18520 DegT/DnrJ/EryC1/StrS family aminotransferase low > 74
Pseudomonas fluorescens SBW25-INTG 0.61 PFLU_RS07805 transaldolase 0.31 PFLU_RS28905 DegT/DnrJ/EryC1/StrS aminotransferase family protein low > 109
Pseudomonas fluorescens SBW25 0.61 PFLU_RS07805 transaldolase 0.31 PFLU_RS28905 DegT/DnrJ/EryC1/StrS aminotransferase family protein low > 109
Pseudomonas simiae WCS417 0.61 PS417_07730 transaldolase 0.31 PS417_27245 aminotransferase DegT — —
Pseudomonas stutzeri RCH2 0.58 Psest_2708 transaldolase 0.29 Psest_1811 UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase — —
Pseudomonas fluorescens FW300-N2E3 0.57 AO353_00310 transaldolase 0.69 AO353_25530 UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase low > 101
Pseudomonas syringae pv. syringae B728a 0.57 Psyr_1914 transaldolase 0.63 Psyr_2689 DegT/DnrJ/EryC1/StrS aminotransferase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.57 Psyr_1914 transaldolase 0.63 Psyr_2689 DegT/DnrJ/EryC1/StrS aminotransferase low > 86
Marinobacter adhaerens HP15 0.55 HP15_2241 transaldolase 0.28 HP15_2398 aminotransferase, DegT/DnrJ/EryC1/StrS family — —
Pseudomonas fluorescens FW300-N2E2 0.55 Pf6N2E2_2258 Transaldolase (EC 2.2.1.2) 0.27 Pf6N2E2_2610 Bacillosamine/Legionaminic acid biosynthesis aminotransferase PglE; 4-keto-6-deoxy-N-Acetyl-D-hexosaminyl-(Lipid carrier) aminotransferase low > 103
Pseudomonas sp. RS175 0.54 PFR28_01142 Transaldolase 0.29 PFR28_00919 UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase — —
Herbaspirillum seropedicae SmR1 0.54 HSERO_RS05500 transaldolase 0.32 HSERO_RS10435 aminotransferase DegT — —
Pseudomonas fluorescens GW456-L13 0.54 PfGW456L13_4009 Transaldolase (EC 2.2.1.2) 0.26 PfGW456L13_4370 Bacillosamine/Legionaminic acid biosynthesis aminotransferase PglE; 4-keto-6-deoxy-N-Acetyl-D-hexosaminyl-(Lipid carrier) aminotransferase low > 87
Pseudomonas fluorescens FW300-N2C3 0.54 AO356_02175 transaldolase 0.24 AO356_03400 aminotransferase DegT low > 104
Pseudomonas fluorescens FW300-N1B4 0.54 Pf1N1B4_58 Transaldolase (EC 2.2.1.2) 0.29 Pf1N1B4_3586 DegT/DnrJ/EryC1/StrS aminotransferase low > 87
Ralstonia sp. UNC404CL21Col 0.54 ABZR87_RS11000 transaldolase 0.30 ABZR87_RS11420 DegT/DnrJ/EryC1/StrS aminotransferase family protein low > 80
Acidovorax sp. GW101-3H11 0.52 Ac3H11_2059 Transaldolase (EC 2.2.1.2) 0.19 Ac3H11_1545 Bacillosamine/Legionaminic acid biosynthesis aminotransferase PglE; 4-keto-6-deoxy-N-Acetyl-D-hexosaminyl-(Lipid carrier) aminotransferase low > 79
Variovorax sp. SCN45 0.51 GFF5266 Transaldolase (EC 2.2.1.2) 0.22 GFF6876 Aminotransferase, DegT/DnrJ/EryC1/StrS family low > 127
Paraburkholderia graminis OAS925 0.51 ABIE53_001416 transaldolase 0.32 ABIE53_002021 dTDP-4-amino-4,6-dideoxygalactose transaminase — —
Variovorax sp. OAS795 0.50 ABID97_RS07095 transaldolase 0.40 ABID97_RS02145 DegT/DnrJ/EryC1/StrS family aminotransferase 0.37 21
Paraburkholderia bryophila 376MFSha3.1 0.50 H281DRAFT_00286 transaldolase 0.33 H281DRAFT_00805 dTDP-4-amino-4,6-dideoxygalactose transaminase — —
Burkholderia phytofirmans PsJN 0.50 BPHYT_RS06045 transaldolase 0.32 BPHYT_RS08930 aminotransferase DegT — —
Paraburkholderia sabiae LMG 24235 0.50 QEN71_RS24595 transaldolase 0.32 QEN71_RS22430 DegT/DnrJ/EryC1/StrS aminotransferase family protein — —
Xanthomonas campestris pv. campestris strain 8004 0.47 Xcc-8004.4226.1 Transaldolase (EC 2.2.1.2) 0.21 Xcc-8004.4490.1 Lipopolysaccharide biosynthesis protein RffA low > 74
Acinetobacter radioresistens SK82 0.47 MPMX26_01753 Transaldolase 0.19 MPMX26_00061 GDP-perosamine synthase low > 36

Not shown: 8 genomes with orthologs for ECD_00008 only; 33 genomes with orthologs for ECD_02179 only