Conservation of cofitness between ECD_00291 and ECD_02107 in Escherichia coli BL21

54 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_00291 cytosine/isoguanine deaminase 1.0 ECD_02107 microcin C ABC transporter periplasmic binding protein 0.68 5
Escherichia coli BW25113 1.00 b0337 codA cytosine deaminase (NCBI) 1.00 b2177 yejA orf, hypothetical protein (VIMSS) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_03334 Cytosine deaminase 1.00 OHPLBJKB_01532 hypothetical protein low > 73
Escherichia coli ECOR27 0.99 NOLOHH_01745 codA cytosine/isoguanine deaminase 0.99 NOLOHH_14965 yejA Uncharacterized protein YejA low > 75
Escherichia coli ECRC62 0.99 BNILDI_23160 codA cytosine/isoguanine deaminase 1.00 BNILDI_13885 yejA Uncharacterized protein YejA low > 75
Escherichia coli ECOR38 0.99 HEPCGN_07460 codA cytosine/isoguanine deaminase 0.99 HEPCGN_22655 yejA Uncharacterized protein YejA low > 87
Escherichia coli ECRC100 0.99 OKFHMN_08845 codA cytosine/isoguanine deaminase 0.99 OKFHMN_23390 yejA Uncharacterized protein YejA low > 80
Escherichia coli ECRC99 0.99 KEDOAH_19120 codA cytosine/isoguanine deaminase 0.99 KEDOAH_04795 yejA Uncharacterized protein YejA
Escherichia coli ECRC102 0.99 NIAGMN_06900 codA cytosine/isoguanine deaminase 0.99 NIAGMN_21155 yejA Uncharacterized protein YejA
Escherichia coli Nissle 1917 0.99 ECOLIN_RS02175 cytosine/isoguanine deaminase 0.99 ECOLIN_RS12730 extracellular solute-binding protein low > 55
Escherichia coli ECRC98 0.99 JDDGAC_12500 codA cytosine/isoguanine deaminase 0.99 JDDGAC_27350 yejA Uncharacterized protein YejA low > 86
Escherichia coli ECRC101 0.99 MCAODC_28075 codA cytosine/isoguanine deaminase 0.99 MCAODC_14440 yejA Uncharacterized protein YejA low > 87
Escherichia fergusonii Becca 0.99 EFB2_03701 Cytosine deaminase 0.99 EFB2_01679 hypothetical protein low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.84 GFF2960 Cytosine deaminase (EC 3.5.4.1) 0.89 GFF3759 ABC transporter, periplasmic substrate-binding protein low > 78
Serratia liquefaciens MT49 0.83 IAI46_23650 cytosine deaminase 0.68 IAI46_17315 ABC transporter substrate-binding protein low > 86
Rahnella sp. WP5 0.81 EX31_RS04665 cytosine deaminase 0.65 EX31_RS19130 ABC transporter substrate-binding protein low > 89
Pantoea sp. MT58 0.80 IAI47_01925 cytosine deaminase 0.60 IAI47_06615 ABC transporter substrate-binding protein low > 76
Enterobacter asburiae PDN3 0.77 EX28DRAFT_4163 Cytosine deaminase and related metal-dependent hydrolases 0.80 EX28DRAFT_0384 ABC-type oligopeptide transport system, periplasmic component low > 76
Klebsiella michiganensis M5al 0.77 BWI76_RS26030 cytosine deaminase 0.78 BWI76_RS19780 antibiotic ABC transporter substrate-binding protein low > 92
Enterobacter sp. TBS_079 0.77 MPMX20_04268 Cytosine deaminase 0.80 MPMX20_03143 hypothetical protein low > 85
Pseudomonas simiae WCS417 0.55 PS417_09800 cytosine deaminase 0.35 PS417_12205 hypothetical protein low > 88
Pseudomonas fluorescens FW300-N1B4 0.55 Pf1N1B4_113 Cytosine deaminase (EC 3.5.4.1) 0.36 Pf1N1B4_4593 ABC transporter, periplasmic substrate-binding protein
Pseudomonas putida KT2440 0.55 PP_3189 cytosine deaminase / isoguanine deaminase 0.36 PP_4147 microcin C transporter - periplasmic binding protein low > 96
Pseudomonas stutzeri RCH2 0.55 Psest_0773 Cytosine deaminase and related metal-dependent hydrolases 0.36 Psest_2067 ABC-type oligopeptide transport system, periplasmic component low > 67
Pseudomonas fluorescens SBW25-INTG 0.55 PFLU_RS10380 cytosine deaminase 0.35 PFLU_RS12895 ABC transporter substrate-binding protein low > 109
Pseudomonas fluorescens SBW25 0.55 PFLU_RS10380 cytosine deaminase 0.35 PFLU_RS12895 ABC transporter substrate-binding protein low > 109
Dickeya dianthicola ME23 0.55 DZA65_RS18425 cytosine deaminase 0.63 DZA65_RS09535 ABC transporter substrate-binding protein low > 75
Pseudomonas fluorescens GW456-L13 0.55 PfGW456L13_2445 Cytosine deaminase (EC 3.5.4.1) 0.35 PfGW456L13_3343 ABC transporter, periplasmic substrate-binding protein low > 87
Dickeya dianthicola 67-19 0.55 HGI48_RS17335 cytosine deaminase 0.63 HGI48_RS09230 ABC transporter substrate-binding protein low > 71
Marinobacter adhaerens HP15 0.54 HP15_2772 N-isopropylammelide isopropylaminohydrolase 0.39 HP15_1807 peptide ABC transporter, periplasmic peptide-binding protein low > 73
Pseudomonas fluorescens FW300-N2E3 0.54 AO353_19755 cytosine deaminase 0.35 AO353_23475 hypothetical protein low > 101
Pseudomonas fluorescens FW300-N2C3 0.54 AO356_21245 cytosine deaminase 0.35 AO356_24465 hypothetical protein low > 104
Pseudomonas sp. RS175 0.53 PFR28_02854 Cytosine deaminase 0.35 PFR28_01549 Oligopeptide-binding protein AppA low > 88
Dickeya dadantii 3937 0.53 DDA3937_RS17280 cytosine deaminase 0.64 DDA3937_RS09190 ABC transporter substrate-binding protein low > 74
Pseudomonas fluorescens FW300-N2E2 0.53 Pf6N2E2_34 Cytosine deaminase (EC 3.5.4.1) 0.35 Pf6N2E2_584 ABC transporter, periplasmic substrate-binding protein low > 103
Variovorax sp. SCN45 0.42 GFF335 Cytosine deaminase (EC 3.5.4.1) 0.25 GFF229 ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) low > 127
Variovorax sp. OAS795 0.42 ABID97_RS16895 amidohydrolase family protein 0.28 ABID97_RS16520 extracellular solute-binding protein low > 91
Paraburkholderia graminis OAS925 0.42 ABIE53_002799 cytosine deaminase 0.29 ABIE53_002550 microcin C transport system substrate-binding protein low > 113
Paraburkholderia bryophila 376MFSha3.1 0.42 H281DRAFT_00460 cytosine deaminase 0.29 H281DRAFT_00560 microcin C transport system substrate-binding protein low > 103
Burkholderia phytofirmans PsJN 0.42 BPHYT_RS12880 cytosine deaminase 0.28 BPHYT_RS12385 peptide ABC transporter substrate-binding protein low > 109
Azospirillum sp. SherDot2 0.42 MPMX19_04386 Cytosine deaminase 0.38 MPMX19_02168 hypothetical protein low > 112
Paraburkholderia sabiae LMG 24235 0.41 QEN71_RS05690 amidohydrolase family protein 0.29 QEN71_RS06170 extracellular solute-binding protein low > 153
Ralstonia solanacearum PSI07 0.41 RPSI07_RS15790 cytosine deaminase 0.26 RPSI07_RS18340 ABC transporter substrate-binding protein low > 81
Cupriavidus basilensis FW507-4G11 0.41 RR42_RS30785 cytosine deaminase 0.28 RR42_RS13385 peptide ABC transporter substrate-binding protein low > 128
Sinorhizobium meliloti 1021 0.41 SMa2371 cytosine deaminase 0.30 SMc02832 periplasmic binding protein low > 103
Ralstonia solanacearum UW163 0.41 UW163_RS15005 cytosine deaminase 0.27 UW163_RS12505 ABC transporter substrate-binding protein
Ralstonia solanacearum IBSBF1503 0.41 RALBFv3_RS01695 cytosine deaminase 0.27 RALBFv3_RS15035 ABC transporter substrate-binding protein low > 76
Ralstonia solanacearum GMI1000 0.41 RS_RS08030 cytosine deaminase 0.26 RS_RS05850 ABC transporter substrate-binding protein low > 80
Azospirillum brasilense Sp245 0.40 AZOBR_RS31895 cytosine deaminase 0.38 AZOBR_RS14595 hypothetical protein low > 97
Acidovorax sp. GW101-3H11 0.40 Ac3H11_2437 Cytosine deaminase (EC 3.5.4.1) 0.29 Ac3H11_2911 ABC transporter, periplasmic substrate-binding protein low > 79
Rhizobium sp. OAE497 0.40 ABIE40_RS21295 amidohydrolase family protein 0.30 ABIE40_RS00615 extracellular solute-binding protein 0.48 54
Rhodospirillum rubrum S1H 0.39 Rru_A2788 N-isopropylammelide isopropylaminohydrolase (NCBI) 0.36 Rru_A3166 extracellular solute-binding protein, family 5 (NCBI) low > 58
Dinoroseobacter shibae DFL-12 0.35 Dshi_1943 N-isopropylammelide isopropylaminohydrolase (RefSeq) 0.29 Dshi_0655 extracellular solute-binding protein family 5 (RefSeq) low > 64
Phaeobacter inhibens DSM 17395 0.35 PGA1_c26940 cytosine deaminase CodA 0.29 PGA1_c30180 ABC transporter extracellular solute-binding protein low > 62
Bosea sp. OAE506 0.19 ABIE41_RS17380 amidohydrolase family protein 0.26 ABIE41_RS15835 extracellular solute-binding protein low > 77

Not shown: 2 genomes with orthologs for ECD_00291 only; 14 genomes with orthologs for ECD_02107 only