Conservation of cofitness between ECD_00132 and ECD_01276 in Escherichia coli BL21

48 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_00132 pantothenate synthetase 1.0 ECD_01276 repressor for the divergent puu operons, putrescine inducible 0.46 4
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_03528 Pantothenate synthetase 1.00 OHPLBJKB_02383 HTH-type transcriptional regulator PuuR low > 73
Escherichia coli BW25113 1.00 b0133 panC pantoate--beta-alanine ligase (NCBI) 1.00 b1299 puuR DNA-binding transcriptional repressor (NCBI) low > 76
Escherichia coli ECRC62 0.99 BNILDI_08920 panC pantoate--beta-alanine ligase 1.00 BNILDI_18270 puuR HTH-type transcriptional regulator PuuR low > 75
Escherichia coli ECOR27 0.99 NOLOHH_02750 panC pantoate--beta-alanine ligase 1.00 NOLOHH_20120 puuR HTH-type transcriptional regulator PuuR low > 75
Escherichia coli ECRC102 0.99 NIAGMN_08255 panC pantoate--beta-alanine ligase 1.00 NIAGMN_26605 puuR HTH-type transcriptional regulator PuuR — —
Escherichia coli ECRC100 0.99 OKFHMN_10405 panC pantoate--beta-alanine ligase 1.00 OKFHMN_02435 puuR HTH-type transcriptional regulator PuuR low > 80
Escherichia coli ECRC99 0.99 KEDOAH_17750 panC pantoate--beta-alanine ligase 1.00 KEDOAH_26340 puuR HTH-type transcriptional regulator PuuR — —
Escherichia coli ECRC98 0.99 JDDGAC_14000 panC pantoate--beta-alanine ligase 1.00 JDDGAC_04980 puuR HTH-type transcriptional regulator PuuR low > 86
Escherichia coli ECRC101 0.99 MCAODC_00920 panC pantoate--beta-alanine ligase 1.00 MCAODC_15835 puuR HTH-type transcriptional regulator PuuR low > 87
Escherichia coli ECOR38 0.98 HEPCGN_08380 panC pantoate--beta-alanine ligase 1.00 HEPCGN_25765 puuR HTH-type transcriptional regulator PuuR low > 87
Klebsiella michiganensis M5al 0.89 BWI76_RS04990 pantoate--beta-alanine ligase 0.97 BWI76_RS10700 XRE family transcriptional regulator low > 92
Enterobacter asburiae PDN3 0.84 EX28DRAFT_3729 pantoate--beta-alanine ligase 0.97 EX28DRAFT_1500 Predicted transcriptional regulators low > 76
Serratia liquefaciens MT49 0.76 IAI46_21245 pantoate--beta-alanine ligase 0.86 IAI46_10550 HTH-type transcriptional regulator PuuR low > 86
Pantoea sp. MT58 0.73 IAI47_15660 pantoate--beta-alanine ligase 0.71 IAI47_07115 HTH-type transcriptional regulator PuuR low > 76
Rahnella sp. WP5 0.73 EX31_RS03285 pantoate--beta-alanine ligase 0.79 EX31_RS17905 HTH-type transcriptional regulator PuuR low > 89
Vibrio cholerae E7946 ATCC 55056 0.58 CSW01_03130 pantoate--beta-alanine ligase 0.15 CSW01_15345 XRE family transcriptional regulator — —
Pseudomonas syringae pv. syringae B728a 0.55 Psyr_0827 pantothenate synthetase 0.37 Psyr_0238 Helix-turn-helix motif protein low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.55 Psyr_0827 pantothenate synthetase 0.37 Psyr_0238 Helix-turn-helix motif protein low > 86
Pseudomonas sp. RS175 0.54 PFR28_03722 Pantothenate synthetase 0.37 PFR28_04396 HTH-type transcriptional regulator PuuR — —
Pseudomonas fluorescens FW300-N2C3 0.53 AO356_16055 pantoate--beta-alanine ligase 0.37 AO356_12635 XRE family transcriptional regulator — —
Pseudomonas sp. S08-1 0.53 OH686_17240 pantoate--beta-alanine ligase 0.37 OH686_13700 Putrescine utilization regulator — —
Pseudomonas fluorescens FW300-N2E2 0.53 Pf6N2E2_5152 Pantoate--beta-alanine ligase (EC 6.3.2.1) 0.37 Pf6N2E2_4394 Putrescine utilization regulator — —
Pseudomonas fluorescens GW456-L13 0.53 PfGW456L13_1520 Pantoate--beta-alanine ligase (EC 6.3.2.1) 0.37 PfGW456L13_815 Putrescine utilization regulator low > 87
Pseudomonas fluorescens FW300-N1B4 0.53 Pf1N1B4_2853 Pantoate--beta-alanine ligase (EC 6.3.2.1) 0.36 Pf1N1B4_2147 Putrescine utilization regulator low > 87
Pseudomonas putida KT2440 0.53 PP_4700 pantothenate synthetase 0.37 PP_5268 DNA-binding transcriptional repressor PuuR-putrescine low > 96
Pseudomonas stutzeri RCH2 0.52 Psest_0995 pantoate--beta-alanine ligase 0.40 Psest_3791 Predicted transcriptional regulators — —
Pseudomonas fluorescens FW300-N2E3 0.52 AO353_14380 pantoate--beta-alanine ligase 0.37 AO353_09140 XRE family transcriptional regulator low > 101
Pseudomonas fluorescens SBW25-INTG 0.51 PFLU_RS25755 pantoate--beta-alanine ligase 0.36 PFLU_RS29365 cupin domain-containing protein low > 109
Pseudomonas fluorescens SBW25 0.51 PFLU_RS25755 pantoate--beta-alanine ligase 0.36 PFLU_RS29365 cupin domain-containing protein low > 109
Pseudomonas simiae WCS417 0.50 PS417_23915 pantoate--beta-alanine ligase 0.36 PS417_27690 XRE family transcriptional regulator low > 88
Shewanella amazonensis SB2B 0.48 Sama_0775 panC pantoate--beta-alanine ligase (RefSeq) 0.36 Sama_2646 XRE family transcriptional regulator (RefSeq) — —
Shewanella oneidensis MR-1 0.48 SO0869 panC pantoate--beta-alanine ligase (NCBI ptt file) 0.39 SO1265 transcriptional regulator, putative (NCBI ptt file) — —
Shewanella loihica PV-4 0.47 Shew_3134 pantoate--beta-alanine ligase (RefSeq) 0.38 Shew_0970 XRE family transcriptional regulator (RefSeq) — —
Shewanella sp. ANA-3 0.47 Shewana3_3409 panC pantoate--beta-alanine ligase (RefSeq) 0.39 Shewana3_3100 XRE family transcriptional regulator (RefSeq) — —
Sinorhizobium meliloti 1021 0.41 SMc01880 pantoate--beta-alanine ligase 0.29 SMc04387 aldehyde dehydrogenase low > 103
Variovorax sp. OAS795 0.40 ABID97_RS07430 pantoate--beta-alanine ligase 0.15 ABID97_RS13245 XRE family transcriptional regulator low > 91
Rhodospirillum rubrum S1H 0.40 Rru_A3320 Cytidyltransferase-related (NCBI) 0.30 Rru_A2042 Transcriptional Regulator, XRE family with Cupin sensor domain (NCBI) — —
Bosea sp. OAE506 0.40 ABIE41_RS14875 pantoate--beta-alanine ligase 0.33 ABIE41_RS05345 cupin domain-containing protein low > 77
Agrobacterium fabrum C58 0.39 Atu3482 pantoate--beta-alanine ligase 0.28 Atu3328 aldehyde dehydrogenase low > 89
Azospirillum brasilense Sp245 0.38 AZOBR_RS09715 pantoate--beta-alanine ligase 0.31 AZOBR_RS19640 aldehyde dehydrogenase low > 97
Ralstonia sp. UNC404CL21Col 0.38 ABZR87_RS00030 pantoate--beta-alanine ligase 0.14 ABZR87_RS06145 XRE family transcriptional regulator — —
Desulfovibrio vulgaris Miyazaki F 0.37 DvMF_2942 panC pantoate--beta-alanine ligase (RefSeq) 0.15 DvMF_2356 transcriptional regulator, XRE family (RefSeq) — —
Azospirillum sp. SherDot2 0.37 MPMX19_04465 Pantothenate synthetase 0.33 MPMX19_04921 HTH-type transcriptional regulator PuuR low > 112
Cupriavidus basilensis FW507-4G11 0.36 RR42_RS16055 pantothenate synthetase 0.21 RR42_RS00225 XRE family transcriptional regulator — —
Paraburkholderia bryophila 376MFSha3.1 0.36 H281DRAFT_00150 pantothenate synthetase 0.19 H281DRAFT_03130 transcriptional regulator, XRE family with cupin sensor — —
Burkholderia phytofirmans PsJN 0.36 BPHYT_RS04925 pantothenate synthetase 0.35 BPHYT_RS23170 XRE family transcriptional regulator — —
Paraburkholderia graminis OAS925 0.36 ABIE53_001260 pantoate--beta-alanine ligase 0.18 ABIE53_004168 transcriptional regulator with XRE-family HTH domain — —
Paraburkholderia sabiae LMG 24235 0.35 QEN71_RS25065 pantoate--beta-alanine ligase 0.33 QEN71_RS12920 cupin domain-containing protein — —

Not shown: 49 genomes with orthologs for ECD_00132 only; 1 genomes with orthologs for ECD_01276 only