Conservation of cofitness between ECD_03281 and ECD_00595 in Escherichia coli BL21

55 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_03281 glycogen synthase 1.0 ECD_00595 putative NAD(P)-binding amidase-type enzyme YbeM (C-N hydrolase family) low > 61
Escherichia coli ECRC100 1.00 OKFHMN_16900 glgA glycogen synthase GlgA 1.00 OKFHMN_07410 tatE deaminated glutathione amidase low > 80
Escherichia coli ECRC98 1.00 JDDGAC_20530 glgA glycogen synthase GlgA 1.00 JDDGAC_11055 tatE deaminated glutathione amidase low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00272 Glycogen synthase 0.99 OHPLBJKB_03080 Deaminated glutathione amidase low > 73
Escherichia coli ECRC99 1.00 KEDOAH_11240 glgA glycogen synthase GlgA 1.00 KEDOAH_20560 tatE deaminated glutathione amidase
Escherichia coli ECRC102 1.00 NIAGMN_14670 glgA glycogen synthase GlgA 1.00 NIAGMN_05465 tatE deaminated glutathione amidase
Escherichia coli ECRC62 1.00 BNILDI_02825 glgA glycogen synthase GlgA 0.99 BNILDI_21795 tatE deaminated glutathione amidase low > 75
Escherichia fergusonii Becca 1.00 EFB2_00390 Glycogen synthase 0.99 EFB2_03466 Deaminated glutathione amidase low > 86
Escherichia coli ECRC101 1.00 MCAODC_07430 glgA glycogen synthase GlgA 1.00 MCAODC_26625 tatE deaminated glutathione amidase low > 87
Escherichia coli ECOR27 1.00 NOLOHH_08690 glgA glycogen synthase GlgA 1.00 NOLOHH_23785 tatE deaminated glutathione amidase low > 75
Escherichia coli Nissle 1917 1.00 ECOLIN_RS19625 glycogen synthase GlgA 0.99 ECOLIN_RS03410 deaminated glutathione amidase
Escherichia coli ECOR38 1.00 HEPCGN_15715 glgA glycogen synthase GlgA 0.99 HEPCGN_00865 tatE deaminated glutathione amidase low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.95 GFF578 Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) 0.74 GFF4538 Aliphatic amidase AmiE (EC 3.5.1.4) low > 78
Enterobacter asburiae PDN3 0.93 EX28DRAFT_4118 glycogen/starch synthase, ADP-glucose type 0.74 EX28DRAFT_2337 Predicted amidohydrolase low > 76
Enterobacter sp. TBS_079 0.93 MPMX20_04311 Glycogen synthase 0.72 MPMX20_01285 Deaminated glutathione amidase low > 85
Klebsiella michiganensis M5al 0.92 BWI76_RS26200 starch synthase 0.71 BWI76_RS07990 carbon-nitrogen hydrolase
Pantoea sp. MT58 0.83 IAI47_01695 glycogen synthase GlgA 0.61 IAI47_14065 deaminated glutathione amidase low > 76
Dickeya dadantii 3937 0.81 DDA3937_RS19730 glycogen synthase GlgA 0.52 DDA3937_RS06130 deaminated glutathione amidase low > 74
Dickeya dianthicola 67-19 0.80 HGI48_RS19840 glycogen synthase GlgA 0.59 HGI48_RS19475 deaminated glutathione amidase low > 71
Dickeya dianthicola ME23 0.80 DZA65_RS20915 glycogen synthase GlgA 0.52 DZA65_RS06520 deaminated glutathione amidase low > 75
Pectobacterium carotovorum WPP14 0.79 HER17_RS01500 glycogen synthase GlgA 0.51 HER17_RS17575 deaminated glutathione amidase low > 75
Rahnella sp. WP5 0.71 EX31_RS05010 glycogen synthase GlgA 0.56 EX31_RS23065 deaminated glutathione amidase low > 89
Burkholderia phytofirmans PsJN 0.51 BPHYT_RS07615 glycogen synthase 0.19 BPHYT_RS03545 apolipoprotein acyltransferase low > 109
Paraburkholderia bryophila 376MFSha3.1 0.50 H281DRAFT_04861 starch synthase 0.20 H281DRAFT_04689 nitrilase low > 103
Paraburkholderia sabiae LMG 24235 0.50 QEN71_RS23430 glycogen synthase GlgA 0.19 QEN71_RS26550 carbon-nitrogen hydrolase family protein low > 153
Variovorax sp. SCN45 0.48 GFF7302 Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) 0.20 GFF5445 FIG003879: Uncharacterized subgroup of the nitrilase superfamily low > 127
Variovorax sp. OAS795 0.48 ABID97_RS04535 glycogen synthase GlgA 0.21 ABID97_RS02000 carbon-nitrogen hydrolase family protein low > 91
Paraburkholderia graminis OAS925 0.45 ABIE53_001742 starch synthase 0.20 ABIE53_000852 putative amidohydrolase low > 113
Azospirillum sp. SherDot2 0.43 MPMX19_02225 Glycogen synthase 0.17 MPMX19_02429 Deaminated glutathione amidase
Magnetospirillum magneticum AMB-1 0.43 AMB_RS10650 glycogen synthase 0.21 AMB_RS08115 carbon-nitrogen hydrolase family protein
Sinorhizobium meliloti 1021 0.41 SMc03924 glycogen synthase 0.19 SMc02442 hydrolase low > 103
Ralstonia sp. UNC404CL21Col 0.38 ABZR87_RS17230 glycogen synthase GlgA 0.19 ABZR87_RS01100 carbon-nitrogen hydrolase family protein low > 80
Pseudomonas syringae pv. syringae B728a 0.38 Psyr_2992 Starch (bacterial glycogen) synthase 0.20 Psyr_4157 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.38 Psyr_2992 Starch (bacterial glycogen) synthase 0.20 Psyr_4157 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 0.71 1
Pseudomonas sp. S08-1 0.37 OH686_01280 Glycogen synthase, ADP-glucose transglucosylase 0.20 OH686_08585 Uncharacterized subgroup of the nitrilase superfamily low > 80
Pseudomonas fluorescens FW300-N2E3 0.36 AO353_23775 glycogen synthase 0.20 AO353_05220 carbon-nitrogen hydrolase low > 101
Pseudomonas sp. RS175 0.36 PFR28_02145 Glycogen synthase 0.20 PFR28_00160 Deaminated glutathione amidase low > 88
Ralstonia solanacearum PSI07 0.36 RPSI07_RS00900 glycogen synthase GlgA 0.19 RPSI07_RS11855 carbon-nitrogen hydrolase family protein low > 81
Pseudomonas simiae WCS417 0.36 PS417_14480 glycogen synthase 0.21 PS417_04280 carbon-nitrogen hydrolase low > 88
Pseudomonas fluorescens SBW25 0.36 PFLU_RS16410 glycogen synthase GlgA 0.21 PFLU_RS04335 carbon-nitrogen hydrolase family protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.36 PFLU_RS16410 glycogen synthase GlgA 0.21 PFLU_RS04335 carbon-nitrogen hydrolase family protein low > 109
Pseudomonas fluorescens GW456-L13 0.36 PfGW456L13_3245 Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) 0.20 PfGW456L13_5027 FIG003879: Predicted amidohydrolase / Omega amidase (Nit2 homolog) low > 87
Pseudomonas stutzeri RCH2 0.36 Psest_2172 glycogen/starch synthases, ADP-glucose type 0.19 Psest_3321 Predicted amidohydrolase low > 67
Pseudomonas fluorescens FW300-N2E2 0.36 Pf6N2E2_1078 Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) 0.21 Pf6N2E2_3281 FIG003879: Predicted amidohydrolase / Omega amidase (Nit2 homolog) low > 103
Pseudomonas fluorescens FW300-N2C3 0.36 AO356_26025 glycogen synthase 0.20 AO356_07100 carbon-nitrogen hydrolase low > 104
Pseudomonas fluorescens FW300-N1B4 0.35 Pf1N1B4_4687 Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) 0.20 Pf1N1B4_1093 FIG003879: Predicted amidohydrolase / Omega amidase (Nit2 homolog) low > 87
Ralstonia solanacearum UW163 0.35 UW163_RS22835 glycogen synthase GlgA 0.18 UW163_RS08175 carbon-nitrogen hydrolase family protein
Ralstonia solanacearum IBSBF1503 0.35 RALBFv3_RS22290 glycogen synthase GlgA 0.18 RALBFv3_RS05450 carbon-nitrogen hydrolase family protein low > 76
Ralstonia solanacearum GMI1000 0.34 RS_RS18320 glycogen synthase 0.19 RS_RS13310 carbon-nitrogen hydrolase family protein low > 80
Herbaspirillum seropedicae SmR1 0.33 HSERO_RS12515 glycogen synthase 0.19 HSERO_RS07150 apolipoprotein acyltransferase low > 78
Bosea sp. OAE506 0.33 ABIE41_RS13060 glycogen synthase GlgA 0.11 ABIE41_RS22010 N-carbamoyl-D-amino-acid hydrolase low > 77
Xanthomonas campestris pv. campestris strain 8004 0.33 Xcc-8004.537.1 Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) 0.12 Xcc-8004.2374.1 N-carbamoylputrescine amidase (3.5.1.53) / Aliphatic amidase AmiE (EC 3.5.1.4)
Alteromonas macleodii MIT1002 0.30 MIT1002_00235 Glycogen synthase 0.18 MIT1002_00226 (R)-stereoselective amidase low > 70
Shewanella amazonensis SB2B 0.16 Sama_2449 starch synthase (RefSeq) 0.22 Sama_0473 carbon-nitrogen family hydrolase (RefSeq) low > 62
Shewanella oneidensis MR-1 0.15 SO1499 glgA glycogen synthase (NCBI ptt file) 0.21 SO4092 hydrolase, carbon-nitrogen family (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.13 Shew_1172 starch synthase (RefSeq) 0.20 Shew_0409 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (RefSeq) low > 60

Not shown: 18 genomes with orthologs for ECD_03281 only; 11 genomes with orthologs for ECD_00595 only