| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Dickeya dianthicola ME23 | 1.0 | DZA65_RS19385 | | glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit | 1.0 | DZA65_RS18550 | | diaminopimelate decarboxylase | 0.85 | 11 |
| Dickeya dianthicola 67-19 | 1.00 | HGI48_RS18245 | | glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit | 0.98 | HGI48_RS17485 | | diaminopimelate decarboxylase | low | > 71 |
| Dickeya dadantii 3937 | 0.95 | DDA3937_RS18310 | | glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit | 0.97 | DDA3937_RS17425 | | diaminopimelate decarboxylase | 0.90 | 7 |
| Pectobacterium carotovorum WPP14 | 0.93 | HER17_RS02895 | | glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit | 0.85 | HER17_RS03710 | | diaminopimelate decarboxylase | 0.95 | 29 |
| Rahnella sp. WP5 | 0.91 | EX31_RS03835 | | glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit | 0.79 | EX31_RS13275 | | diaminopimelate decarboxylase | 0.95 | 31 |
| Klebsiella michiganensis M5al | 0.89 | BWI76_RS04465 | | carbamoyl-phosphate synthase small subunit | 0.74 | BWI76_RS23360 | | diaminopimelate decarboxylase | 0.49 | 62 |
| Enterobacter asburiae PDN3 | 0.88 | EX28DRAFT_3637 | | carbamoyl-phosphate synthase, small subunit | 0.78 | EX28DRAFT_2916 | | diaminopimelate decarboxylase | — | — |
| Escherichia coli BW25113 | 0.88 | b0032 | carA | carbamoyl-phosphate synthase small subunit (NCBI) | 0.74 | b2838 | lysA | diaminopimelate decarboxylase, PLP-binding (NCBI) | 0.82 | 61 |
| Escherichia coli BL21 | 0.88 | ECD_00036 | | carbamoyl phosphate synthetase small subunit, glutamine amidotransferase | 0.74 | ECD_02686 | | diaminopimelate decarboxylase, PLP-binding | low | > 61 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.88 | OHPLBJKB_03625 | | Carbamoyl-phosphate synthase small chain | 0.74 | OHPLBJKB_00891 | | Diaminopimelate decarboxylase | low | > 73 |
| Serratia liquefaciens MT49 | 0.88 | IAI46_03190 | | glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit | 0.79 | IAI46_20520 | | diaminopimelate decarboxylase | 0.58 | 80 |
| Escherichia coli ECRC102 | 0.88 | NIAGMN_08795 | carA | carbamoyl phosphate synthase small subunit | 0.74 | NIAGMN_17715 | lysA | diaminopimelate decarboxylase | — | — |
| Escherichia coli ECRC98 | 0.88 | JDDGAC_14540 | carA | carbamoyl phosphate synthase small subunit | 0.73 | JDDGAC_23610 | lysA | diaminopimelate decarboxylase | 0.81 | 39 |
| Escherichia coli ECRC100 | 0.88 | OKFHMN_10945 | carA | carbamoyl phosphate synthase small subunit | 0.74 | OKFHMN_19945 | lysA | diaminopimelate decarboxylase | 0.84 | 48 |
| Escherichia coli ECRC62 | 0.88 | BNILDI_08325 | carA | carbamoyl phosphate synthase small subunit | 0.74 | BNILDI_10310 | lysA | diaminopimelate decarboxylase | 0.78 | 59 |
| Escherichia coli ECRC99 | 0.88 | KEDOAH_17210 | carA | carbamoyl phosphate synthase small subunit | 0.74 | KEDOAH_08185 | lysA | diaminopimelate decarboxylase | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.88 | GFF214 | | Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) | 0.73 | GFF1323 | | Diaminopimelate decarboxylase (EC 4.1.1.20) | low | > 78 |
| Escherichia coli ECOR38 | 0.88 | HEPCGN_08930 | carA | carbamoyl phosphate synthase small subunit | 0.74 | HEPCGN_19565 | lysA | diaminopimelate decarboxylase | 0.88 | 15 |
| Escherichia coli ECRC101 | 0.88 | MCAODC_01460 | carA | carbamoyl phosphate synthase small subunit | 0.74 | MCAODC_10470 | lysA | diaminopimelate decarboxylase | 0.80 | 37 |
| Escherichia coli ECOR27 | 0.88 | NOLOHH_03275 | carA | carbamoyl phosphate synthase small subunit | 0.74 | NOLOHH_11830 | lysA | diaminopimelate decarboxylase | 0.81 | 46 |
| Escherichia fergusonii Becca | 0.88 | EFB2_04013 | | Carbamoyl-phosphate synthase small chain | 0.74 | EFB2_01045 | | Diaminopimelate decarboxylase | low | > 86 |
| Escherichia coli Nissle 1917 | 0.88 | ECOLIN_RS00175 | | glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit | 0.74 | ECOLIN_RS15930 | | diaminopimelate decarboxylase | 0.79 | 22 |
| Enterobacter sp. TBS_079 | 0.85 | MPMX20_00739 | | Carbamoyl-phosphate synthase small chain | 0.77 | MPMX20_03705 | | Diaminopimelate decarboxylase | 0.70 | 68 |
| Pantoea sp. MT58 | 0.84 | IAI47_16120 | | glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit | 0.74 | IAI47_03860 | | diaminopimelate decarboxylase | 0.90 | 5 |
| Erwinia tracheiphila SCR3 | 0.84 | LU632_RS02755 | carA | glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit | 0.72 | LU632_RS06040 | lysA | diaminopimelate decarboxylase | 0.60 | 56 |
| Pseudomonas fluorescens FW300-N1B4 | 0.71 | Pf1N1B4_1173 | | Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) | 0.20 | Pf1N1B4_2174 | | Diaminopimelate decarboxylase (EC 4.1.1.20) | — | — |
| Pseudomonas putida KT2440 | 0.70 | PP_4724 | | Carbamoyl-phosphate synthase small chain | 0.57 | PP_2077 | | diaminopimelate decarboxylase | low | > 96 |
| Dechlorosoma suillum PS | 0.68 | Dsui_3065 | | carbamoyl-phosphate synthase, small subunit | 0.21 | Dsui_1182 | | diaminopimelate decarboxylase | — | — |
| Rhodanobacter denitrificans MT42 | 0.65 | LRK55_RS17850 | | glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit | 0.24 | LRK55_RS11215 | | diaminopimelate decarboxylase | — | — |
| Lysobacter sp. OAE881 | 0.65 | ABIE51_RS11625 | | glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit | 0.24 | ABIE51_RS13675 | | diaminopimelate decarboxylase | low | > 62 |
| Rhodanobacter denitrificans FW104-10B01 | 0.64 | LRK54_RS17995 | | glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit | 0.23 | LRK54_RS11485 | | diaminopimelate decarboxylase | — | — |
| Dyella japonica UNC79MFTsu3.2 | 0.64 | ABZR86_RS05605 | | glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit | 0.22 | ABZR86_RS12130 | | diaminopimelate decarboxylase | — | — |
| Acidovorax sp. GW101-3H11 | 0.64 | Ac3H11_435 | | Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) | 0.66 | Ac3H11_3862 | | Diaminopimelate decarboxylase (EC 4.1.1.20) | — | — |
| Rhodanobacter sp. FW510-T8 | 0.64 | OKGIIK_07300 | | carbamoyl phosphate synthase small subunit | 0.23 | OKGIIK_12375 | lysA | diaminopimelate decarboxylase | low | > 52 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.63 | GFF4899 | | Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) | 0.19 | GFF1341 | | Diaminopimelate decarboxylase (EC 4.1.1.20) | — | — |
| Burkholderia phytofirmans PsJN | 0.62 | BPHYT_RS14195 | | carbamoyl phosphate synthase small subunit | 0.61 | BPHYT_RS35090 | | diaminopimelate decarboxylase | low | > 109 |
| Rhodospirillum rubrum S1H | 0.48 | Rru_A2885 | | Carbamoyl-phosphate synthase, small subunit (NCBI) | 0.21 | Rru_A0396 | | Diaminopimelate decarboxylase (NCBI) | — | — |
| Phaeobacter inhibens DSM 17395 | 0.48 | PGA1_c06670 | | carbamoyl-phosphate synthase small chain | 0.21 | PGA1_c03470 | | diaminopimelate decarboxylase LysA | — | — |
| Sphingomonas koreensis DSMZ 15582 | 0.47 | Ga0059261_4243 | | carbamoyl-phosphate synthase, small subunit | 0.20 | Ga0059261_2051 | | diaminopimelate decarboxylase (EC 4.1.1.20) (from data) | — | — |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.47 | A4249_RS16140 | | glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit | 0.21 | A4249_RS12545 | | diaminopimelate decarboxylase | — | — |
| Dinoroseobacter shibae DFL-12 | 0.47 | Dshi_2387 | | carbamoyl-phosphate synthase, small subunit (RefSeq) | 0.20 | Dshi_3059 | | diaminopimelate decarboxylase (RefSeq) | — | — |
| Bosea sp. OAE506 | 0.47 | ABIE41_RS11975 | | glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit | 0.20 | ABIE41_RS08740 | | diaminopimelate decarboxylase | — | — |
| Caulobacter crescentus NA1000 Δfur | 0.45 | CCNA_02925 | | carbamoyl-phosphate synthase small chain | 0.21 | CCNA_02296 | | diaminopimelate decarboxylase | — | — |
| Caulobacter crescentus NA1000 | 0.45 | CCNA_02925 | | carbamoyl-phosphate synthase small chain | 0.21 | CCNA_02296 | | diaminopimelate decarboxylase | — | — |
| Synechococcus elongatus PCC 7942 | 0.45 | Synpcc7942_2122 | carA | carbamoyl phosphate synthase small subunit | 0.15 | Synpcc7942_0262 | lysA | diaminopimelate decarboxylase | — | — |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.40 | CA265_RS15240 | | carbamoyl phosphate synthase small subunit | 0.17 | CA265_RS09650 | | diaminopimelate decarboxylase | — | — |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.39 | DVU3113 | carA | carbamoyl-phosphate synthase, small subunit (TIGR) | 0.24 | DVU2566 | lysA-2 | diaminopimelate decarboxylase (TIGR) | — | — |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.38 | Echvi_0226 | | carbamoyl-phosphate synthase, small subunit | 0.22 | Echvi_1295 | | diaminopimelate decarboxylase (EC 4.1.1.20) (from data) | — | — |
| Methanococcus maripaludis JJ | 0.37 | MMJJ_RS06195 | | glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit | 0.18 | MMJJ_RS08170 | | diaminopimelate decarboxylase | — | — |
| Desulfovibrio vulgaris Miyazaki F | 0.37 | DvMF_2370 | | carbamoyl phosphate synthase small subunit (RefSeq) | 0.23 | DvMF_1010 | | diaminopimelate decarboxylase (RefSeq) | low | > 51 |
| Methanococcus maripaludis S2 | 0.37 | MMP_RS08170 | | glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit | 0.17 | MMP_RS06180 | | diaminopimelate decarboxylase | — | — |
Not shown: 53 genomes with orthologs for DZA65_RS19385 only; 0 genomes with orthologs for DZA65_RS18550 only