Conservation of cofitness between DZA65_RS19385 and DZA65_RS06470 in Dickeya dianthicola ME23

59 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Dickeya dianthicola ME23 1.0 DZA65_RS19385 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 1.0 DZA65_RS06470 phosphoribosylaminoimidazolesuccinocarboxamide synthase 0.82 16
Dickeya dianthicola 67-19 1.00 HGI48_RS18245 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 1.00 HGI48_RS06120 phosphoribosylaminoimidazolesuccinocarboxamide synthase 0.79 14
Dickeya dadantii 3937 0.95 DDA3937_RS18310 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.98 DDA3937_RS06075 phosphoribosylaminoimidazolesuccinocarboxamide synthase 0.85 16
Pectobacterium carotovorum WPP14 0.93 HER17_RS02895 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.95 HER17_RS15405 phosphoribosylaminoimidazolesuccinocarboxamide synthase 0.93 45
Rahnella sp. WP5 0.91 EX31_RS03835 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.92 EX31_RS22750 phosphoribosylaminoimidazolesuccinocarboxamide synthase 0.91 57
Klebsiella michiganensis M5al 0.89 BWI76_RS04465 carbamoyl-phosphate synthase small subunit 0.90 BWI76_RS20895 phosphoribosylaminoimidazolesuccinocarboxamide synthase 0.61 9
Enterobacter asburiae PDN3 0.88 EX28DRAFT_3637 carbamoyl-phosphate synthase, small subunit 0.91 EX28DRAFT_0184 phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6) — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.88 OHPLBJKB_03625 Carbamoyl-phosphate synthase small chain 0.89 OHPLBJKB_01254 Phosphoribosylaminoimidazole-succinocarboxamide synthase 0.34 66
Serratia liquefaciens MT49 0.88 IAI46_03190 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.89 IAI46_18770 phosphoribosylaminoimidazolesuccinocarboxamide synthase low > 86
Escherichia coli BL21 0.88 ECD_00036 carbamoyl phosphate synthetase small subunit, glutamine amidotransferase 0.89 ECD_02368 phosphoribosylaminoimidazole-succinocarboxamide synthetase — —
Escherichia coli BW25113 0.88 b0032 carA carbamoyl-phosphate synthase small subunit (NCBI) 0.89 b2476 purC phosphoribosylaminoimidazole-succinocarboxamidesynthase (NCBI) 0.82 64
Escherichia coli ECOR38 0.88 HEPCGN_08930 carA carbamoyl phosphate synthase small subunit 0.89 HEPCGN_21100 purC phosphoribosylaminoimidazolesuccinocarboxamide synthase 0.81 73
Escherichia coli ECRC102 0.88 NIAGMN_08795 carA carbamoyl phosphate synthase small subunit 0.89 NIAGMN_19700 purC phosphoribosylaminoimidazolesuccinocarboxamide synthase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.88 GFF214 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) 0.91 GFF2182 Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6) 0.39 71
Escherichia coli ECRC99 0.88 KEDOAH_17210 carA carbamoyl phosphate synthase small subunit 0.89 KEDOAH_06290 purC phosphoribosylaminoimidazolesuccinocarboxamide synthase — —
Escherichia coli ECOR27 0.88 NOLOHH_03275 carA carbamoyl phosphate synthase small subunit 0.89 NOLOHH_13590 purC phosphoribosylaminoimidazolesuccinocarboxamide synthase 0.93 11
Escherichia coli ECRC100 0.88 OKFHMN_10945 carA carbamoyl phosphate synthase small subunit 0.89 OKFHMN_21930 purC phosphoribosylaminoimidazolesuccinocarboxamide synthase 0.84 46
Escherichia coli ECRC62 0.88 BNILDI_08325 carA carbamoyl phosphate synthase small subunit 0.89 BNILDI_12400 purC phosphoribosylaminoimidazolesuccinocarboxamide synthase 0.91 25
Escherichia coli ECRC98 0.88 JDDGAC_14540 carA carbamoyl phosphate synthase small subunit 0.89 JDDGAC_25875 purC phosphoribosylaminoimidazolesuccinocarboxamide synthase low > 86
Escherichia coli ECRC101 0.88 MCAODC_01460 carA carbamoyl phosphate synthase small subunit 0.89 MCAODC_12460 purC phosphoribosylaminoimidazolesuccinocarboxamide synthase low > 87
Escherichia coli Nissle 1917 0.88 ECOLIN_RS00175 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.89 ECOLIN_RS14130 phosphoribosylaminoimidazolesuccinocarboxamide synthase low > 55
Escherichia fergusonii Becca 0.88 EFB2_04013 Carbamoyl-phosphate synthase small chain 0.89 EFB2_01411 Phosphoribosylaminoimidazole-succinocarboxamide synthase low > 86
Enterobacter sp. TBS_079 0.85 MPMX20_00739 Carbamoyl-phosphate synthase small chain 0.91 MPMX20_03338 Phosphoribosylaminoimidazole-succinocarboxamide synthase 0.86 29
Pantoea sp. MT58 0.84 IAI47_16120 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.89 IAI47_05275 phosphoribosylaminoimidazolesuccinocarboxamide synthase 0.84 53
Erwinia tracheiphila SCR3 0.84 LU632_RS02755 carA glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.87 LU632_RS08335 phosphoribosylaminoimidazolesuccinocarboxamide synthase 0.69 28
Alteromonas macleodii MIT1002 0.72 MIT1002_01466 Carbamoyl-phosphate synthase small chain 0.70 MIT1002_02205 Phosphoribosylaminoimidazole-succinocarboxamide synthase — —
Pseudomonas fluorescens FW300-N2E3 0.71 AO353_05635 carbamoyl phosphate synthase small subunit 0.71 AO353_17685 phosphoribosylaminoimidazole-succinocarboxamide synthase — —
Pseudomonas fluorescens GW456-L13 0.71 PfGW456L13_5100 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) 0.69 PfGW456L13_4504 Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6) — —
Pseudomonas fluorescens FW300-N2E2 0.71 Pf6N2E2_3365 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) 0.67 Pf6N2E2_2744 Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6) — —
Pseudomonas fluorescens FW300-N2C3 0.71 AO356_07485 carbamoyl phosphate synthase small subunit 0.66 AO356_04515 phosphoribosylaminoimidazole-succinocarboxamide synthase — —
Pseudomonas fluorescens FW300-N1B4 0.71 Pf1N1B4_1173 Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) 0.70 Pf1N1B4_3335 Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6) — —
Pseudomonas putida KT2440 0.70 PP_4724 Carbamoyl-phosphate synthase small chain 0.71 PP_1240 Phosphoribosylaminoimidazole-succinocarboxamide synthase — —
Pseudomonas syringae pv. syringae B728a 0.70 Psyr_4192 carbamoyl-phosphate synthase small subunit 0.72 Psyr_1551 phosphoribosylaminoimidazole-succinocarboxamide synthase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.70 Psyr_4192 carbamoyl-phosphate synthase small subunit 0.72 Psyr_1551 phosphoribosylaminoimidazole-succinocarboxamide synthase — —
Pseudomonas simiae WCS417 0.70 PS417_24045 carbamoyl phosphate synthase small subunit 0.65 PS417_07180 phosphoribosylaminoimidazole-succinocarboxamide synthase — —
Pseudomonas fluorescens SBW25-INTG 0.70 PFLU_RS25885 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.65 PFLU_RS07290 phosphoribosylaminoimidazolesuccinocarboxamide synthase — —
Pseudomonas fluorescens SBW25 0.70 PFLU_RS25885 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.65 PFLU_RS07290 phosphoribosylaminoimidazolesuccinocarboxamide synthase — —
Marinobacter adhaerens HP15 0.70 HP15_3078 carbamoyl-phosphate synthase small chain 0.68 HP15_2025 phosphoribosylaminoimidazole-succinocarboxamide synthase — —
Pseudomonas sp. RS175 0.70 PFR28_00076 Carbamoyl-phosphate synthase small chain 0.70 PFR28_00702 Phosphoribosylaminoimidazole-succinocarboxamide synthase — —
Acinetobacter radioresistens SK82 0.68 MPMX26_00767 Carbamoyl-phosphate synthase small chain 0.60 MPMX26_02984 Phosphoribosylaminoimidazole-succinocarboxamide synthase low > 36
Azospirillum brasilense Sp245 0.51 AZOBR_RS10920 carbamoyl phosphate synthase small subunit 0.43 AZOBR_RS04370 phosphoribosylaminoimidazole-succinocarboxamide synthase — —
Azospirillum sp. SherDot2 0.51 MPMX19_00757 Carbamoyl-phosphate synthase small chain 0.43 MPMX19_00448 Phosphoribosylaminoimidazole-succinocarboxamide synthase — —
Magnetospirillum magneticum AMB-1 0.51 AMB_RS03600 carbamoyl-phosphate synthase small subunit 0.44 AMB_RS07775 phosphoribosylaminoimidazolesuccinocarboxamide synthase — —
Rhodospirillum rubrum S1H 0.48 Rru_A2885 Carbamoyl-phosphate synthase, small subunit (NCBI) 0.42 Rru_A0711 phosphoribosylaminoimidazole-succinocarboxamidesynthase (RefSeq) — —
Rhodopseudomonas palustris CGA009 0.48 TX73_006555 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.43 TX73_019780 phosphoribosylaminoimidazolesuccinocarboxamide synthase — —
Phaeobacter inhibens DSM 17395 0.48 PGA1_c06670 carbamoyl-phosphate synthase small chain 0.40 PGA1_c13400 phosphoribosylaminoimidazole-succinocarboxamide synthase PurC 0.64 40
Sphingomonas koreensis DSMZ 15582 0.47 Ga0059261_4243 carbamoyl-phosphate synthase, small subunit 0.39 Ga0059261_1526 phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6) — —
Brevundimonas sp. GW460-12-10-14-LB2 0.47 A4249_RS16140 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.41 A4249_RS00890 phosphoribosylaminoimidazolesuccinocarboxamide synthase — —
Sinorhizobium meliloti 1021 0.47 SMc01569 carbamoyl phosphate synthase small subunit 0.45 SMc00495 phosphoribosylaminoimidazolesuccinocarboxamide synthase 0.68 21
Dinoroseobacter shibae DFL-12 0.47 Dshi_2387 carbamoyl-phosphate synthase, small subunit (RefSeq) 0.42 Dshi_1076 phosphoribosylaminoimidazole-succinocarboxamidesynthase (RefSeq) — —
Bosea sp. OAE506 0.47 ABIE41_RS11975 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.44 ABIE41_RS05015 phosphoribosylaminoimidazolesuccinocarboxamide synthase — —
Rhizobium sp. OAE497 0.45 ABIE40_RS12765 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.44 ABIE40_RS10140 phosphoribosylaminoimidazolesuccinocarboxamide synthase — —
Agrobacterium fabrum C58 0.45 Atu2170 carbamoylphosphate synthase small chain 0.45 Atu1843 phosphoribosylaminoimidazole-succinocarboxamide synthase — —
Caulobacter crescentus NA1000 0.45 CCNA_02925 carbamoyl-phosphate synthase small chain 0.42 CCNA_02576 phosphoribosylamidoimidazole-succinocarboxamide synthase — —
Caulobacter crescentus NA1000 Δfur 0.45 CCNA_02925 carbamoyl-phosphate synthase small chain 0.42 CCNA_02576 phosphoribosylamidoimidazole-succinocarboxamide synthase low > 67
Synechococcus elongatus PCC 7942 0.45 Synpcc7942_2122 carA carbamoyl phosphate synthase small subunit 0.37 Synpcc7942_0927 purC phosphoribosylaminoimidazole-succinocarboxamide synthase — —
Fusobacterium nucleatum SB010 0.40 HUW76_08755 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.42 HUW76_05165 phosphoribosylaminoimidazolesuccinocarboxamide synthase low > 35
Bifidobacterium breve UCC2003 0.39 BBR_RS13630 carbamoyl-phosphate synthase small subunit 0.40 BBR_RS13450 phosphoribosylaminoimidazolesuccinocarboxamide synthase low > 34
Methanococcus maripaludis JJ 0.37 MMJJ_RS06195 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.36 MMJJ_RS02215 phosphoribosylaminoimidazolesuccinocarboxamide synthase — —
Methanococcus maripaludis S2 0.37 MMP_RS08170 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit 0.36 MMP_RS02860 phosphoribosylaminoimidazolesuccinocarboxamide synthase — —

Not shown: 44 genomes with orthologs for DZA65_RS19385 only; 0 genomes with orthologs for DZA65_RS06470 only