Conservation of cofitness between CSW01_04590 and CSW01_17095 in Vibrio cholerae E7946 ATCC 55056

51 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_04590 transcriptional regulator GcvA 1.0 CSW01_17095 protein acetyltransferase 0.56 16
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.73 GFF4865 Glycine cleavage system transcriptional activator GcvA 0.53 GFF2096 Protein acetyltransferase low > 78
Serratia liquefaciens MT49 0.72 IAI46_20340 transcriptional regulator GcvA 0.54 IAI46_20025 bifunctional acetate--CoA ligase family protein/GNAT family N-acetyltransferase low > 87
Rahnella sp. WP5 0.72 EX31_RS13110 transcriptional regulator GcvA 0.52 EX31_RS13680 bifunctional acetate--CoA ligase family protein/GNAT family N-acetyltransferase low > 89
Erwinia amylovora T8 0.72 OLJFJH_09170 Glycine cleavage system transcriptional activator 0.50 OLJFJH_09780 protein acetyltransferase low > 58
Shewanella amazonensis SB2B 0.72 Sama_2429 DNA-binding transcriptional activator GcvA (RefSeq) 0.49 Sama_1760 acetyltransferase (RefSeq) low > 62
Escherichia coli ECRC99 0.72 KEDOAH_08010 gcvA glycine cleavage system transcriptional regulator GcvA 0.53 KEDOAH_06900 pat protein lysine acetyltransferase
Escherichia coli ECRC102 0.72 NIAGMN_17890 gcvA glycine cleavage system transcriptional regulator GcvA 0.53 NIAGMN_19090 pat protein lysine acetyltransferase 0.49 61
Escherichia coli Nissle 1917 0.72 ECOLIN_RS15650 glycine cleavage system transcriptional regulator GcvA 0.53 ECOLIN_RS14625 protein lysine acetyltransferase low > 55
Escherichia coli ECOR38 0.72 HEPCGN_19375 gcvA glycine cleavage system transcriptional regulator GcvA 0.53 HEPCGN_20445 pat protein lysine acetyltransferase low > 88
Escherichia coli HS(pFamp)R (ATCC 700891) 0.72 OHPLBJKB_00923 Glycine cleavage system transcriptional activator 0.53 OHPLBJKB_01122 Protein lysine acetyltransferase Pka low > 74
Escherichia coli ECRC100 0.72 OKFHMN_20120 gcvA glycine cleavage system transcriptional regulator GcvA 0.53 OKFHMN_21320 pat protein lysine acetyltransferase low > 79
Escherichia fergusonii Becca 0.72 EFB2_01109 Glycine cleavage system transcriptional activator 0.53 EFB2_01312 Peptidyl-lysine N-acetyltransferase PatZ low > 86
Escherichia coli BL21 0.72 ECD_02659 glycine cleavage system transcriptional activator; autorepressor 0.53 ECD_02478 protein lysine acetyltransferase low > 61
Escherichia coli BW25113 0.72 b2808 gcvA DNA-binding transcriptional dual regulator (NCBI) 0.53 b2584 yfiQ fused predicted acyl-CoA synthetase: NAD(P)-binding subunit/ATP-binding subunit (NCBI) low > 76
Escherichia coli ECRC98 0.72 JDDGAC_23785 gcvA glycine cleavage system transcriptional regulator GcvA 0.53 JDDGAC_24985 pat protein lysine acetyltransferase low > 87
Escherichia coli ECOR27 0.72 NOLOHH_12000 gcvA glycine cleavage system transcriptional regulator GcvA 0.53 NOLOHH_12990 pat protein lysine acetyltransferase low > 76
Escherichia coli ECRC62 0.72 BNILDI_10505 gcvA glycine cleavage system transcriptional regulator GcvA 0.53 BNILDI_11795 pat protein lysine acetyltransferase low > 75
Escherichia coli ECRC101 0.72 MCAODC_10645 gcvA glycine cleavage system transcriptional regulator GcvA 0.53 MCAODC_11850 pat protein lysine acetyltransferase low > 87
Erwinia tracheiphila HP pepo 2.2 0.71 IJEDHG_17275 gcvA Glycine cleavage system transcriptional activator 0.47 IJEDHG_26820 protein acetyltransferase low > 61
Erwinia tracheiphila SCR3 0.71 LU632_RS06255 transcriptional regulator GcvA 0.47 LU632_RS16920 bifunctional acetate--CoA ligase family protein/GNAT family N-acetyltransferase low > 73
Enterobacter sp. TBS_079 0.71 MPMX20_03671 Glycine cleavage system transcriptional activator 0.54 MPMX20_03453 Peptidyl-lysine N-acetyltransferase Pat low > 85
Dickeya dadantii 3937 0.71 DDA3937_RS05050 transcriptional regulator GcvA 0.54 DDA3937_RS16785 bifunctional acetate--CoA ligase family protein/GNAT family N-acetyltransferase low > 74
Pantoea agglomerans CFBP13505 P0401 0.71 PagCFBP13505_RS16945 transcriptional regulator GcvA 0.52 PagCFBP13505_RS14470 bifunctional acetate--CoA ligase family protein/GNAT family N-acetyltransferase low > 74
Klebsiella michiganensis M5al 0.71 BWI76_RS22955 transcriptional regulator GcvA 0.52 BWI76_RS21400 protein lysine acetyltransferase low > 92
Pantoea sp. MT58 0.71 IAI47_04025 transcriptional regulator GcvA 0.52 IAI47_04475 bifunctional acetate--CoA ligase family protein/GNAT family N-acetyltransferase low > 76
Enterobacter asburiae PDN3 0.71 EX28DRAFT_2883 Transcriptional regulator 0.54 EX28DRAFT_0063 Acyl-CoA synthetase (NDP forming) low > 76
Dickeya dianthicola ME23 0.71 DZA65_RS05390 transcriptional regulator GcvA 0.54 DZA65_RS17930 bifunctional acetate--CoA ligase family protein/GNAT family N-acetyltransferase low > 75
Shewanella sp. ANA-3 0.71 Shewana3_2894 DNA-binding transcriptional activator GcvA (RefSeq) 0.48 Shewana3_2223 CoA-binding domain-containing protein (RefSeq)
Dickeya dianthicola 67-19 0.71 HGI48_RS05050 transcriptional regulator GcvA 0.54 HGI48_RS16855 bifunctional acetate--CoA ligase family protein/GNAT family N-acetyltransferase low > 71
Shewanella loihica PV-4 0.71 Shew_2764 DNA-binding transcriptional activator GcvA (RefSeq) 0.51 Shew_2039 GCN5-related N-acetyltransferase (RefSeq)
Pectobacterium carotovorum WPP14 0.71 HER17_RS16415 transcriptional regulator GcvA 0.54 HER17_RS04430 bifunctional acetate--CoA ligase family protein/GNAT family N-acetyltransferase low > 75
Shewanella oneidensis MR-1 0.70 SO1533 glycine cleavage system transcriptional activator, putative (NCBI ptt file) 0.48 SO2116 acetyltransferase, GNAT family (NCBI ptt file) low > 76
Klebsiella pneumoniae MKP103 0.63 KDGMDA_03515 Glycine cleavage system transcriptional activator 0.52 KDGMDA_28525 protein lysine acetyltransferase low > 95
Azospirillum sp. SherDot2 0.44 MPMX19_01055 Glycine cleavage system transcriptional activator 0.37 MPMX19_02746 Peptidyl-lysine N-acetyltransferase Pat low > 112
Azospirillum brasilense Sp245 0.39 AZOBR_RS20105 transcriptional regulator 0.36 AZOBR_RS01315 GCN5 family N-acetyltransferase low > 97
Rhodospirillum rubrum S1H 0.37 Rru_A2214 Transcriptional Regulator, LysR family (NCBI) 0.39 Rru_A1804 N-acetyltransferase (NCBI) low > 58
Burkholderia phytofirmans PsJN 0.34 BPHYT_RS11810 LysR family transcriptional regulator 0.21 BPHYT_RS34265 N-acetyltransferase GCN5 0.16 109
Variovorax sp. SCN45 0.32 GFF1355 Transcriptional regulator, LysR family 0.33 GFF7221 Protein lysine acetyltransferase Pat (EC 2.3.1.-) low > 127
Cupriavidus basilensis FW507-4G11 0.31 RR42_RS34190 LysR family transcriptional regulator 0.37 RR42_RS09770 GCN5 family acetyltransferase low > 128
Desulfovibrio vulgaris Hildenborough JW710 0.31 DVU1402 transcriptional regulator, LysR family (TIGR) 0.37 DVU2970 acetyltransferase, GNAT family (TIGR) low > 55
Paraburkholderia bryophila 376MFSha3.1 0.31 H281DRAFT_02051 LysR family transcriptional regulator, glycine cleavage system transcriptional activator 0.21 H281DRAFT_03536 acetyltransferase low > 103
Sphingomonas koreensis DSMZ 15582 0.31 Ga0059261_4130 Transcriptional regulator 0.29 Ga0059261_3832 Acyl-CoA synthetase (NDP forming) low > 68
Magnetospirillum magneticum AMB-1 0.30 AMB_RS04220 transcriptional regulator GcvA 0.41 AMB_RS12870 GNAT family N-acetyltransferase low > 64
Bosea sp. OAE506 0.28 ABIE41_RS23870 transcriptional regulator GcvA 0.23 ABIE41_RS01525 GNAT family N-acetyltransferase low > 77
Sinorhizobium meliloti 1021 0.28 SMa0179 LysR family transcriptional regulator 0.28 SMa1146 hypothetical protein low > 103
Dechlorosoma suillum PS 0.27 Dsui_2033 transcriptional regulator 0.35 Dsui_2189 acyl-CoA synthetase (NDP forming) low > 51
Lysobacter sp. OAE881 0.26 ABIE51_RS00605 LysR substrate-binding domain-containing protein 0.30 ABIE51_RS08475 bifunctional acetate--CoA ligase family protein/GNAT family N-acetyltransferase low > 62
Marinobacter adhaerens HP15 0.24 HP15_1669 transcriptional regulator, LysR family protein 0.30 HP15_1220 acetyltransferase, GNAT family low > 73
Rhodopseudomonas palustris CGA009 0.23 TX73_013680 LysR substrate-binding domain-containing protein 0.31 TX73_021970 bifunctional acetate--CoA ligase family protein/GNAT family N-acetyltransferase low > 86
Xanthomonas campestris pv. campestris strain 8004 0.22 Xcc-8004.1418.1 Glycine cleavage system transcriptional activator 0.30 Xcc-8004.5063.1 Acetyl-CoA synthetase (ADP-forming) alpha and beta chains, putative
Xanthobacter sp. DMC5 0.22 GFF4114 HTH-type transcriptional regulator TrpI 0.34 GFF3779 Peptidyl-lysine N-acetyltransferase PatZ

Not shown: 52 genomes with orthologs for CSW01_04590 only; 1 genomes with orthologs for CSW01_17095 only