Conservation of cofitness between CSW01_01105 and CSW01_14505 in Vibrio cholerae E7946 ATCC 55056

70 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_01105 hypothetical protein 1.0 CSW01_14505 nicotinate phosphoribosyltransferase 0.48 9
Enterobacter asburiae PDN3 0.78 EX28DRAFT_3040 TIGR00645 family protein 0.35 EX28DRAFT_2005 nicotinate phosphoribosyltransferase low > 76
Enterobacter sp. TBS_079 0.78 MPMX20_03846 hypothetical protein 0.35 MPMX20_01589 Nicotinate phosphoribosyltransferase low > 85
Pseudomonas aeruginosa PA14 0.76 IKLFDK_00650 UPF0114 protein PA14_60530 0.37 IKLFDK_02220 nicotinate phosphoribosyltransferase low > 98
Pseudomonas aeruginosa PUPa3 0.76 DQ20_RS56040 TIGR00645 family protein 0.37 DQ20_RS57060 pncB;go_function=nicotinate nicotinate phosphoribosyltransferase 0.36 51
Pseudomonas aeruginosa MRSN321 0.76 DY961_RS23575 TIGR00645 family protein 0.37 DY961_RS24610 pncB;go_function=nicotinate nicotinate phosphoribosyltransferase low > 100
Klebsiella michiganensis M5al 0.75 BWI76_RS24270 membrane protein 0.35 BWI76_RS09885 nicotinate phosphoribosyltransferase low > 92
Klebsiella pneumoniae MKP103 0.75 KDGMDA_05095 UPF0114 protein KPK_0696 0.35 KDGMDA_18110 nicotinate phosphoribosyltransferase low > 95
Erwinia tracheiphila SCR3 0.74 LU632_RS00860 TIGR00645 family protein 0.35 LU632_RS09925 pncB nicotinate phosphoribosyltransferase — —
Erwinia tracheiphila HP pepo 2.2 0.74 IJEDHG_10755 TIGR00645 family protein 0.35 IJEDHG_20430 pncB nicotinate phosphoribosyltransferase — —
Pantoea sp. MT58 0.73 IAI47_01255 TIGR00645 family protein 0.35 IAI47_12750 nicotinate phosphoribosyltransferase low > 76
Pantoea agglomerans CFBP13505 P0401 0.73 PagCFBP13505_RS20680 TIGR00645 family protein 0.35 PagCFBP13505_RS04580 nicotinate phosphoribosyltransferase low > 74
Pseudomonas sp. SVBP6 0.72 COO64_RS03045 TIGR00645 family protein 0.38 COO64_RS10040 pncB nicotinate phosphoribosyltransferase low > 93
Serratia liquefaciens MT49 0.72 IAI46_12210 TIGR00645 family protein 0.37 IAI46_08765 nicotinate phosphoribosyltransferase 0.56 8
Pseudomonas sp. S08-1 0.72 OH686_16270 Putative inner membrane protein 0.38 OH686_03820 nicotinate phosphoribosyltransferase low > 80
Pseudomonas putida KT2440 0.72 PP_0682 conserved inner membrane protein of unknown function, UPF0114 family 0.32 PP_4868 Nicotinate phosphoribosyltransferase low > 96
Pseudomonas sp. BP01 0.72 JOY50_RS24680 TIGR00645 family protein 0.39 JOY50_RS07915 pncB nicotinate phosphoribosyltransferase low > 84
Pseudomonas syringae pv. syringae B728a ΔmexB 0.71 Psyr_4257 Uncharacterized protein UPF0114 0.35 Psyr_0595 Nicotinate phosphoribosyltransferase low > 86
Pseudomonas syringae pv. syringae B728a 0.71 Psyr_4257 Uncharacterized protein UPF0114 0.35 Psyr_0595 Nicotinate phosphoribosyltransferase low > 86
Escherichia coli ECRC100 0.71 OKFHMN_18985 yqhA UPF0114 protein YqhA 0.35 OKFHMN_05370 pncB nicotinate phosphoribosyltransferase low > 79
Escherichia coli Nissle 1917 0.71 ECOLIN_RS17290 TIGR00645 family protein 0.35 ECOLIN_RS04930 nicotinate phosphoribosyltransferase low > 55
Escherichia coli ECRC102 0.71 NIAGMN_16750 yqhA UPF0114 protein YqhA 0.35 NIAGMN_03090 pncB nicotinate phosphoribosyltransferase low > 80
Escherichia coli ECOR38 0.71 HEPCGN_17845 yqhA UPF0114 protein YqhA 0.35 HEPCGN_23155 pncB nicotinate phosphoribosyltransferase low > 88
Escherichia fergusonii Becca 0.71 EFB2_00806 hypothetical protein 0.35 EFB2_03133 Nicotinate phosphoribosyltransferase low > 86
Pseudomonas fluorescens FW300-N1B4 0.71 Pf1N1B4_2791 Putative inner membrane protein (Fragment) 0.36 Pf1N1B4_1386 Nicotinate phosphoribosyltransferase (EC 2.4.2.11) low > 87
Escherichia coli ECRC62 0.71 BNILDI_00755 yqhA UPF0114 protein YqhA 0.35 BNILDI_20180 pncB nicotinate phosphoribosyltransferase 0.59 13
Pseudomonas stutzeri RCH2 0.71 Psest_3394 TIGR00645 family protein 0.37 Psest_1171 nicotinate phosphoribosyltransferase low > 67
Escherichia coli ECRC101 0.71 MCAODC_09500 yqhA UPF0114 protein YqhA 0.35 MCAODC_24760 pncB nicotinate phosphoribosyltransferase low > 87
Escherichia coli ECOR27 0.71 NOLOHH_10760 yqhA UPF0114 protein YqhA 0.35 NOLOHH_21925 pncB nicotinate phosphoribosyltransferase low > 76
Escherichia coli BL21 0.71 ECD_02877 UPF0114 family putative inner membrane protein 0.35 ECD_00935 nicotinate phosphoribosyltransferase low > 61
Pseudomonas fluorescens GW456-L13 0.71 PfGW456L13_1462 Putative inner membrane protein (Fragment) 0.36 PfGW456L13_129 Nicotinate phosphoribosyltransferase (EC 2.4.2.11) low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.71 OHPLBJKB_00697 hypothetical protein 0.35 OHPLBJKB_02735 Nicotinate phosphoribosyltransferase low > 74
Escherichia coli BW25113 0.71 b3002 yqhA hypothetical protein (NCBI) 0.35 b0931 pncB nicotinate phosphoribosyltransferase (NCBI) low > 76
Escherichia coli ECRC98 0.71 JDDGAC_22620 yqhA UPF0114 protein YqhA 0.35 JDDGAC_08980 pncB nicotinate phosphoribosyltransferase low > 87
Escherichia coli ECRC99 0.71 KEDOAH_09160 yqhA UPF0114 protein YqhA 0.35 KEDOAH_22365 pncB nicotinate phosphoribosyltransferase — —
Pseudomonas fluorescens FW300-N2E3 0.71 AO353_14070 hypothetical protein 0.36 AO353_13320 nicotinate phosphoribosyltransferase low > 101
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.71 GFF3112 Putative membrane protein 0.35 GFF3695 Nicotinate phosphoribosyltransferase (EC 2.4.2.11) low > 78
Pseudomonas sp. DMC3 0.70 GFF3974 hypothetical protein 0.36 GFF3248 Nicotinate phosphoribosyltransferase 2 low > 89
Pseudomonas sp. RS175 0.70 PFR28_03777 hypothetical protein 0.36 PFR28_05149 Nicotinate phosphoribosyltransferase 2 low > 88
Pseudomonas fluorescens FW300-N2E2 0.69 Pf6N2E2_5095 Putative inner membrane protein (Fragment) 0.36 Pf6N2E2_3585 Nicotinate phosphoribosyltransferase (EC 2.4.2.11) low > 103
Erwinia amylovora T8 0.69 OLJFJH_04610 TIGR00645 family protein 0.35 OLJFJH_16030 nicotinate phosphoribosyltransferase — —
Pseudomonas fluorescens FW300-N2C3 0.69 AO356_15775 hypothetical protein 0.36 AO356_08520 nicotinate phosphoribosyltransferase low > 104
Pectobacterium carotovorum WPP14 0.69 HER17_RS19160 TIGR00645 family protein 0.35 HER17_RS12015 nicotinate phosphoribosyltransferase low > 75
Pseudomonas fluorescens SBW25-INTG 0.69 PFLU_RS26135 TIGR00645 family protein 0.36 PFLU_RS02705 nicotinate phosphoribosyltransferase low > 109
Pseudomonas simiae WCS417 0.69 PS417_24215 hypothetical protein 0.36 PS417_02635 nicotinate phosphoribosyltransferase — —
Pseudomonas fluorescens SBW25 0.69 PFLU_RS26135 TIGR00645 family protein 0.36 PFLU_RS02705 nicotinate phosphoribosyltransferase low > 109
Pseudomonas orientalis W4I3 0.69 QF045_RS26470 TIGR00645 family protein 0.36 QF045_RS05685 nicotinate phosphoribosyltransferase low > 93
Pseudomonas lactucae CFBP13502 0.68 GEMAOFIL_04990 hypothetical protein 0.35 GEMAOFIL_00764 Nicotinate phosphoribosyltransferase 2 low > 96
Dickeya dianthicola ME23 0.68 DZA65_RS04555 TIGR00645 family protein 0.33 DZA65_RS13425 nicotinate phosphoribosyltransferase low > 75
Dickeya dianthicola 67-19 0.68 HGI48_RS04635 TIGR00645 family protein 0.34 HGI48_RS12960 nicotinate phosphoribosyltransferase low > 71
Dickeya dadantii 3937 0.68 DDA3937_RS04680 TIGR00645 family protein 0.34 DDA3937_RS12890 nicotinate phosphoribosyltransferase low > 74
Azospirillum sp. SherDot2 0.53 MPMX19_01767 hypothetical protein 0.17 MPMX19_03477 Nicotinate phosphoribosyltransferase low > 112
Rhizobium sp. OAE497 0.48 ABIE40_RS13435 TIGR00645 family protein 0.23 ABIE40_RS00645 nicotinate phosphoribosyltransferase low > 107
Agrobacterium fabrum C58 0.47 Atu2286 hypothetical protein 0.22 Atu0213 nicotinate phosphoribosyltransferase low > 89
Xanthobacter sp. DMC5 0.42 GFF2552 hypothetical protein 0.16 GFF1953 Nicotinate phosphoribosyltransferase — —
Paraburkholderia sabiae LMG 24235 0.41 QEN71_RS23775 TIGR00645 family protein 0.31 QEN71_RS04445 nicotinate phosphoribosyltransferase low > 153
Burkholderia phytofirmans PsJN 0.40 BPHYT_RS06990 membrane protein 0.30 BPHYT_RS14535 nicotinate phosphoribosyltransferase low > 109
Paraburkholderia graminis OAS925 0.40 ABIE53_001663 uncharacterized protein (TIGR00645 family) 0.30 ABIE53_003069 nicotinate phosphoribosyltransferase low > 113
Paraburkholderia bryophila 376MFSha3.1 0.39 H281DRAFT_04955 TIGR00645 family protein 0.30 H281DRAFT_04330 nicotinate phosphoribosyltransferase — —
Bosea sp. OAE506 0.38 ABIE41_RS03170 TIGR00645 family protein 0.20 ABIE41_RS14420 nicotinate phosphoribosyltransferase — —
Ralstonia sp. UNC404CL21Col 0.38 ABZR87_RS14370 TIGR00645 family protein 0.32 ABZR87_RS10040 nicotinate phosphoribosyltransferase low > 80
Ralstonia solanacearum IBSBF1503 0.38 RALBFv3_RS02455 membrane protein 0.32 RALBFv3_RS14325 nicotinate phosphoribosyltransferase low > 76
Ralstonia solanacearum PSI07 0.38 RPSI07_RS14870 membrane protein 0.33 RPSI07_RS19135 nicotinate phosphoribosyltransferase low > 81
Ralstonia solanacearum GMI1000 0.38 RS_RS09825 membrane protein 0.33 RS_RS05105 nicotinate phosphoribosyltransferase low > 80
Ralstonia solanacearum UW163 0.38 UW163_RS11270 membrane protein 0.32 UW163_RS11790 nicotinate phosphoribosyltransferase — —
Variovorax sp. OAS795 0.37 ABID97_RS17530 YqhA family protein 0.29 ABID97_RS10590 nicotinate phosphoribosyltransferase low > 91
Variovorax sp. SCN45 0.37 GFF476 InterPro IPR005134 COGs COG2862 0.30 GFF2870 Nicotinate phosphoribosyltransferase (EC 6.3.4.21) low > 127
Acidovorax sp. GW101-3H11 0.35 Ac3H11_950 putative membrane protein 0.30 Ac3H11_2962 Nicotinate phosphoribosyltransferase (EC 2.4.2.11) low > 79
Hydrogenophaga sp. GW460-11-11-14-LB1 0.34 GFF4106 putative membrane protein 0.30 GFF1573 Nicotinate phosphoribosyltransferase (EC 2.4.2.11) low > 90
Dyella japonica UNC79MFTsu3.2 0.33 ABZR86_RS11550 TIGR00645 family protein 0.30 ABZR86_RS00460 nicotinate phosphoribosyltransferase low > 74
Herbaspirillum seropedicae SmR1 0.31 HSERO_RS07765 membrane protein 0.31 HSERO_RS08100 nicotinate phosphoribosyltransferase low > 78

Not shown: 12 genomes with orthologs for CSW01_01105 only; 17 genomes with orthologs for CSW01_14505 only