Conservation of cofitness between CSW01_11350 and CSW01_14340 in Vibrio cholerae E7946 ATCC 55056

69 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_11350 phosphoribosylformylglycinamidine cyclo-ligase 1.0 CSW01_14340 S9 family peptidase 0.67 7
Shewanella amazonensis SB2B 0.80 Sama_2097 phosphoribosylaminoimidazole synthetase (RefSeq) 0.20 Sama_0144 oligopeptidase B (RefSeq) low > 62
Shewanella loihica PV-4 0.79 Shew_1513 phosphoribosylaminoimidazole synthetase (RefSeq) 0.19 Shew_0039 oligopeptidase B (RefSeq) — —
Pectobacterium carotovorum WPP14 0.79 HER17_RS15465 phosphoribosylformylglycinamidine cyclo-ligase 0.21 HER17_RS11765 prolyl oligopeptidase family serine peptidase low > 75
Serratia liquefaciens MT49 0.79 IAI46_18885 phosphoribosylformylglycinamidine cyclo-ligase 0.25 IAI46_18560 S9 family peptidase low > 87
Shewanella sp. ANA-3 0.78 Shewana3_2545 phosphoribosylaminoimidazole synthetase (RefSeq) 0.18 Shewana3_0135 oligopeptidase B (RefSeq) low > 73
Dickeya dianthicola ME23 0.78 DZA65_RS06420 phosphoribosylformylglycinamidine cyclo-ligase 0.22 DZA65_RS10595 prolyl oligopeptidase family serine peptidase low > 75
Dickeya dadantii 3937 0.78 DDA3937_RS06025 phosphoribosylformylglycinamidine cyclo-ligase 0.23 DDA3937_RS10150 prolyl oligopeptidase family serine peptidase low > 74
Dickeya dianthicola 67-19 0.78 HGI48_RS06070 phosphoribosylformylglycinamidine cyclo-ligase 0.22 HGI48_RS10180 prolyl oligopeptidase family serine peptidase low > 71
Shewanella oneidensis MR-1 0.78 SO2760 purM phosphoribosylformylglycinamidine cyclo-ligase (NCBI ptt file) 0.19 SO0144 ptrB protease II (NCBI ptt file) low > 76
Klebsiella michiganensis M5al 0.77 BWI76_RS20965 phosphoribosylformylglycinamidine cyclo-ligase 0.22 BWI76_RS18075 oligopeptidase B low > 92
Klebsiella pneumoniae MKP103 0.77 KDGMDA_27805 Phosphoribosylformylglycinamidine cyclo-ligase 0.21 KDGMDA_25340 oligopeptidase B low > 95
Enterobacter asburiae PDN3 0.77 EX28DRAFT_0168 phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) 0.22 EX28DRAFT_0709 Protease II — —
Pantoea agglomerans CFBP13505 P0401 0.77 PagCFBP13505_RS15070 phosphoribosylformylglycinamidine cyclo-ligase 0.20 PagCFBP13505_RS02395 oligopeptidase B low > 74
Escherichia fergusonii Becca 0.77 EFB2_01399 Phosphoribosylformylglycinamidine cyclo-ligase 0.22 EFB2_02099 Protease 2 low > 86
Enterobacter sp. TBS_079 0.77 MPMX20_03354 Phosphoribosylformylglycinamidine cyclo-ligase 0.22 MPMX20_02752 Protease 2 low > 85
Escherichia coli ECOR38 0.77 HEPCGN_20975 purM Phosphoribosylformylglycinamidine cyclo-ligase 0.22 HEPCGN_04780 ptrB oligopeptidase B low > 88
Escherichia coli BL21 0.77 ECD_02391 phosphoribosylaminoimidazole synthetase 0.22 ECD_01816 protease II low > 61
Escherichia coli ECOR27 0.77 NOLOHH_13460 purM Phosphoribosylformylglycinamidine cyclo-ligase 0.22 NOLOHH_16890 ptrB oligopeptidase B low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.77 OHPLBJKB_01227 Phosphoribosylformylglycinamidine cyclo-ligase 0.22 OHPLBJKB_01886 Protease 2 low > 74
Pantoea sp. MT58 0.77 IAI47_05180 phosphoribosylformylglycinamidine cyclo-ligase 0.21 IAI47_08515 prolyl oligopeptidase family serine peptidase low > 76
Escherichia coli ECRC62 0.77 BNILDI_12270 purM Phosphoribosylformylglycinamidine cyclo-ligase 0.22 BNILDI_15685 ptrB oligopeptidase B low > 75
Escherichia coli BW25113 0.77 b2499 purM phosphoribosylaminoimidazole synthetase (NCBI) 0.22 b1845 ptrB protease II (NCBI) low > 76
Escherichia coli ECRC100 0.76 OKFHMN_21810 purM Phosphoribosylformylglycinamidine cyclo-ligase 0.22 OKFHMN_26380 ptrB oligopeptidase B low > 79
Escherichia coli ECRC98 0.76 JDDGAC_25755 purM Phosphoribosylformylglycinamidine cyclo-ligase 0.22 JDDGAC_00955 ptrB oligopeptidase B low > 87
Escherichia coli ECRC102 0.76 NIAGMN_19580 purM Phosphoribosylformylglycinamidine cyclo-ligase 0.22 NIAGMN_01680 ptrB oligopeptidase B low > 80
Escherichia coli ECRC101 0.76 MCAODC_12340 purM Phosphoribosylformylglycinamidine cyclo-ligase 0.22 MCAODC_19025 ptrB oligopeptidase B low > 87
Escherichia coli ECRC99 0.76 KEDOAH_06410 purM Phosphoribosylformylglycinamidine cyclo-ligase 0.22 KEDOAH_01725 ptrB oligopeptidase B — —
Rahnella sp. WP5 0.76 EX31_RS22695 phosphoribosylformylglycinamidine cyclo-ligase 0.21 EX31_RS24750 prolyl oligopeptidase family serine peptidase low > 89
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.76 GFF2169 Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) 0.22 GFF1624 Protease II (EC 3.4.21.83) low > 78
Erwinia amylovora T8 0.74 OLJFJH_10590 Phosphoribosylformylglycinamidine cyclo-ligase 0.21 OLJFJH_12920 oligopeptidase B low > 58
Alteromonas macleodii MIT1002 0.73 MIT1002_02219 Phosphoribosylformylglycinamidine cyclo-ligase 0.19 MIT1002_02578 Protease 2 low > 70
Pseudomonas syringae pv. syringae B728a ΔmexB 0.70 Psyr_3689 phosphoribosylformylglycinamidine cyclo-ligase 0.20 Psyr_1574 oligopeptidase B, Serine peptidase, MEROPS family S09A — —
Pseudomonas syringae pv. syringae B728a 0.70 Psyr_3689 phosphoribosylformylglycinamidine cyclo-ligase 0.20 Psyr_1574 oligopeptidase B, Serine peptidase, MEROPS family S09A — —
Pseudomonas sp. SVBP6 0.69 COO64_RS07295 purM phosphoribosylformylglycinamidine cyclo-ligase 0.21 COO64_RS22275 S9 family peptidase low > 93
Kangiella aquimarina DSM 16071 0.69 B158DRAFT_2385 phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) 0.20 B158DRAFT_2324 Protease II — —
Pseudomonas sp. BP01 0.69 JOY50_RS23940 purM phosphoribosylformylglycinamidine cyclo-ligase 0.20 JOY50_RS01480 S9 family peptidase — —
Pseudomonas fluorescens SBW25 0.69 PFLU_RS22065 phosphoribosylformylglycinamidine cyclo-ligase 0.19 PFLU_RS07530 S9 family peptidase — —
Pseudomonas segetis P6 0.69 MPMX49_01661 Phosphoribosylformylglycinamidine cyclo-ligase 0.20 MPMX49_02979 Protease 2 — —
Pseudomonas fluorescens FW300-N2C3 0.69 AO356_19090 phosphoribosylaminoimidazole synthetase 0.20 AO356_04360 peptidase S9 low > 104
Pseudomonas fluorescens SBW25-INTG 0.69 PFLU_RS22065 phosphoribosylformylglycinamidine cyclo-ligase 0.19 PFLU_RS07530 S9 family peptidase — —
Pseudomonas fluorescens FW300-N2E2 0.69 Pf6N2E2_5729 Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) 0.20 Pf6N2E2_2713 Protease II (EC 3.4.21.83) — —
Pseudomonas putida KT2440 0.69 PP_1665 Phosphoribosylformylglycinamidine cyclo-ligase 0.20 PP_4583 putative Peptidase — —
Pseudomonas stutzeri RCH2 0.69 Psest_1474 phosphoribosylaminoimidazole synthetase 0.19 Psest_2655 Protease II low > 67
Pseudomonas sp. DMC3 0.69 GFF2539 Phosphoribosylformylglycinamidine cyclo-ligase 0.20 GFF2321 Protease 2 low > 89
Pseudomonas simiae WCS417 0.69 PS417_20120 phosphoribosylaminoimidazole synthetase 0.19 PS417_07445 peptidase S9 — —
Pseudomonas sp. S08-1 0.69 OH686_18995 Phosphoribosylformylglycinamidine cyclo-ligase 0.19 OH686_05270 Protease II — —
Pseudomonas fluorescens GW456-L13 0.69 PfGW456L13_4252 Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) 0.20 PfGW456L13_4484 Protease II (EC 3.4.21.83) — —
Pseudomonas sp. RS175 0.69 PFR28_03217 Phosphoribosylformylglycinamidine cyclo-ligase 0.20 PFR28_00723 Dipeptidyl aminopeptidase BI low > 88
Pseudomonas fluorescens FW300-N2E3 0.69 AO353_02680 phosphoribosylaminoimidazole synthetase 0.20 AO353_17950 peptidase S9 — —
Pseudomonas fluorescens FW300-N1B4 0.69 Pf1N1B4_3698 Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) 0.20 Pf1N1B4_3357 Protease II (EC 3.4.21.83) — —
Pseudomonas lactucae CFBP13502 0.68 GEMAOFIL_04217 Phosphoribosylformylglycinamidine cyclo-ligase 0.20 GEMAOFIL_01622 Protease 2 — —
Pseudomonas aeruginosa MRSN321 0.68 DY961_RS07715 purM;go_function=phosphoribosylformylglycinamidine phosphoribosylformylglycinamidine cyclo-ligase 0.20 DY961_RS18855 S9 family peptidase low > 100
Pseudomonas aeruginosa PUPa3 0.68 DQ20_RS45080 purM;go_function=phosphoribosylformylglycinamidine phosphoribosylformylglycinamidine cyclo-ligase 0.20 DQ20_RS52995 S9 family peptidase low > 101
Pseudomonas aeruginosa PA14 0.68 IKLFDK_04260 Phosphoribosylformylglycinamidine cyclo-ligase 0.20 IKLFDK_06190 peptidase S9 low > 98
Lysobacter sp. OAE881 0.53 ABIE51_RS15890 phosphoribosylformylglycinamidine cyclo-ligase 0.20 ABIE51_RS03010 S9 family peptidase low > 62
Xanthomonas campestris pv. campestris strain 8004 0.53 Xcc-8004.1676.1 Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) 0.20 Xcc-8004.842.1 Protease II (EC 3.4.21.83) low > 74
Agrobacterium fabrum C58 0.52 Atu1141 Phosphoribosylglycinamide synthetase 0.17 Atu0897 protease II low > 89
Rhizobium sp. OAE497 0.52 ABIE40_RS06560 phosphoribosylformylglycinamidine cyclo-ligase 0.18 ABIE40_RS04845 S9 family peptidase low > 107
Sphingobium sp. HT1-2 0.52 GFF2468 Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) 0.18 GFF834 Protease II (EC 3.4.21.83) low > 95
Sphingomonas koreensis DSMZ 15582 0.50 Ga0059261_0228 phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1) 0.20 Ga0059261_3776 Protease II — —
Sinorhizobium meliloti 1021 0.50 SMc00615 phosphoribosylaminoimidazole synthetase 0.19 SMc00114 protease II oligopeptidase B hydrolase serine protease low > 103
Caulobacter crescentus NA1000 Δfur 0.50 CCNA_01775 phosphoribosylformylglycinamidine cyclo-ligase 0.16 CCNA_00985 protease II PtrB low > 67
Caulobacter crescentus NA1000 0.50 CCNA_01775 phosphoribosylformylglycinamidine cyclo-ligase 0.16 CCNA_00985 protease II PtrB low > 66
Brevundimonas sp. GW460-12-10-14-LB2 0.49 A4249_RS08210 phosphoribosylformylglycinamidine cyclo-ligase 0.14 A4249_RS06115 S9 family peptidase — —
Xanthobacter sp. DMC5 0.47 GFF1754 Phosphoribosylformylglycinamidine cyclo-ligase 0.18 GFF4139 Dipeptidyl aminopeptidase BI — —
Bosea sp. OAE506 0.46 ABIE41_RS17040 phosphoribosylformylglycinamidine cyclo-ligase 0.18 ABIE41_RS22470 S9 family peptidase low > 77
Rhodopseudomonas palustris CGA009 0.46 TX73_015785 phosphoribosylformylglycinamidine cyclo-ligase 0.18 TX73_008065 S9 family peptidase — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.11 CA264_17695 phosphoribosylformylglycinamidine cyclo-ligase 0.21 CA264_12915 oligopeptidase B low > 74
Echinicola vietnamensis KMM 6221, DSM 17526 0.08 Echvi_0734 Phosphoribosylaminoimidazole (AIR) synthetase 0.20 Echvi_2305 Protease II — —

Not shown: 45 genomes with orthologs for CSW01_11350 only; 1 genomes with orthologs for CSW01_14340 only