Conservation of cofitness between CSW01_14665 and CSW01_13810 in Vibrio cholerae E7946 ATCC 55056

64 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_14665 ribokinase 1.0 CSW01_13810 phosphoenolpyruvate carboxykinase (ATP) 0.79 9
Serratia liquefaciens MT49 0.53 IAI46_25055 ribokinase 0.81 IAI46_23770 phosphoenolpyruvate carboxykinase (ATP) low > 87
Escherichia coli BL21 0.52 ECD_03638 ribokinase 0.81 ECD_03255 phosphoenolpyruvate carboxykinase [ATP] low > 61
Escherichia fergusonii Becca 0.52 EFB2_04881 Ribokinase 0.81 EFB2_00425 Phosphoenolpyruvate carboxykinase (ATP) low > 86
Escherichia coli Nissle 1917 0.52 ECOLIN_RS21570 ribokinase 0.81 ECOLIN_RS19435 phosphoenolpyruvate carboxykinase (ATP) low > 55
Escherichia coli ECRC100 0.52 OKFHMN_14730 rbsK ribokinase 0.81 OKFHMN_17045 pckA phosphoenolpyruvate carboxykinase (ATP) low > 79
Escherichia coli ECRC101 0.52 MCAODC_05235 rbsK ribokinase 0.81 MCAODC_07575 pckA phosphoenolpyruvate carboxykinase (ATP) low > 87
Escherichia coli BW25113 0.52 b3752 rbsK ribokinase (NCBI) 0.81 b3403 pck phosphoenolpyruvate carboxykinase (NCBI) low > 76
Escherichia coli ECRC99 0.52 KEDOAH_13420 rbsK ribokinase 0.81 KEDOAH_11095 pckA phosphoenolpyruvate carboxykinase (ATP) — —
Escherichia coli ECOR27 0.52 NOLOHH_06865 rbsK ribokinase 0.81 NOLOHH_08835 pckA phosphoenolpyruvate carboxykinase (ATP) low > 76
Escherichia coli ECRC98 0.52 JDDGAC_18350 rbsK ribokinase 0.81 JDDGAC_20675 pckA phosphoenolpyruvate carboxykinase (ATP) low > 87
Escherichia coli ECRC102 0.52 NIAGMN_12485 rbsK ribokinase 0.81 NIAGMN_14815 pckA phosphoenolpyruvate carboxykinase (ATP) low > 80
Escherichia coli HS(pFamp)R (ATCC 700891) 0.52 OHPLBJKB_04301 Ribokinase 0.81 OHPLBJKB_00300 Phosphoenolpyruvate carboxykinase (ATP) low > 74
Escherichia coli ECRC62 0.52 BNILDI_04660 rbsK ribokinase 0.81 BNILDI_02685 pckA phosphoenolpyruvate carboxykinase (ATP) low > 75
Escherichia coli ECOR38 0.52 HEPCGN_13440 rbsK ribokinase 0.81 HEPCGN_15865 pckA phosphoenolpyruvate carboxykinase (ATP) low > 88
Pantoea sp. MT58 0.52 IAI47_00370 ribokinase 0.77 IAI47_01830 phosphoenolpyruvate carboxykinase (ATP) low > 76
Pectobacterium carotovorum WPP14 0.52 HER17_RS21530 ribokinase 0.80 HER17_RS01710 phosphoenolpyruvate carboxykinase (ATP) low > 75
Rahnella sp. WP5 0.52 EX31_RS06190 ribokinase 0.79 EX31_RS04780 phosphoenolpyruvate carboxykinase (ATP) low > 89
Pantoea agglomerans CFBP13505 P0401 0.51 PagCFBP13505_RS18965 ribokinase 0.77 PagCFBP13505_RS18350 phosphoenolpyruvate carboxykinase (ATP) low > 74
Erwinia amylovora T8 0.51 OLJFJH_05410 ribokinase 0.78 OLJFJH_04150 phosphoenolpyruvate carboxykinase (ATP) low > 58
Klebsiella michiganensis M5al 0.51 BWI76_RS00290 Ribokinase (EC 2.7.1.15) (from data) 0.79 BWI76_RS26155 phosphoenolpyruvate carboxykinase (ATP) low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.51 GFF1705 Ribokinase (EC 2.7.1.15) 0.81 GFF615 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) low > 78
Dickeya dadantii 3937 0.51 DDA3937_RS00050 ribokinase 0.81 DDA3937_RS19610 phosphoenolpyruvate carboxykinase (ATP) low > 74
Dickeya dianthicola 67-19 0.51 HGI48_RS21315 ribokinase 0.81 HGI48_RS19740 phosphoenolpyruvate carboxykinase (ATP) low > 71
Dickeya dianthicola ME23 0.50 DZA65_RS22295 ribokinase 0.81 DZA65_RS20830 phosphoenolpyruvate carboxykinase (ATP) low > 75
Klebsiella pneumoniae MKP103 0.50 KDGMDA_08895 ribokinase 0.81 KDGMDA_06970 phosphoenolpyruvate carboxykinase (ATP) low > 95
Enterobacter sp. TBS_079 0.49 MPMX20_04615 Ribokinase 0.79 MPMX20_04290 Phosphoenolpyruvate carboxykinase (ATP) low > 85
Enterobacter asburiae PDN3 0.49 EX28DRAFT_4028 ribokinase 0.79 EX28DRAFT_4140 phosphoenolpyruvate carboxykinase (ATP) low > 76
Shewanella sp. ANA-3 0.43 Shewana3_3477 ribokinase (RefSeq) 0.36 Shewana3_0147 phosphoenolpyruvate carboxykinase (RefSeq) low > 73
Bacteroides ovatus ATCC 8483 0.42 BACOVA_02050 ribokinase 0.72 BACOVA_02011 phosphoenolpyruvate carboxykinase (ATP) — —
Shewanella loihica PV-4 0.42 Shew_0696 ribokinase (RefSeq) 0.37 Shew_3623 phosphoenolpyruvate carboxykinase (RefSeq) low > 60
Bacteroides stercoris CC31F 0.42 HMPREF1181_RS02060 ribokinase 0.72 HMPREF1181_RS01170 phosphoenolpyruvate carboxykinase (ATP) — —
Shewanella oneidensis MR-1 0.41 SO0810 rbsK ribokinase (NCBI ptt file) 0.36 SO0162 pckA phosphoenolpyruvate carboxykinase (ATP) (NCBI ptt file) low > 76
Parabacteroides merdae CL09T00C40 0.41 HMPREF1078_RS08685 ribokinase 0.72 HMPREF1078_RS07235 phosphoenolpyruvate carboxykinase (ATP) — —
Pseudomonas aeruginosa MRSN321 0.39 DY961_RS28765 rbsK;go_function=ribokinase ribokinase 0.34 DY961_RS11825 phosphoenolpyruvate carboxykinase — —
Pseudomonas aeruginosa PUPa3 0.39 DQ20_RS38250 rbsK;go_function=ribokinase ribokinase 0.34 DQ20_RS50285 phosphoenolpyruvate carboxykinase low > 101
Pseudomonas aeruginosa PA14 0.39 IKLFDK_09520 ribokinase 0.34 IKLFDK_27515 phosphoenolpyruvate carboxykinase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.37 Psyr_2155 Carbohydrate kinase, PfkB 0.33 Psyr_0168 Phosphoenolpyruvate carboxykinase (ATP) low > 86
Pseudomonas syringae pv. syringae B728a 0.37 Psyr_2155 Carbohydrate kinase, PfkB 0.33 Psyr_0168 Phosphoenolpyruvate carboxykinase (ATP) low > 86
Pseudomonas simiae WCS417 0.36 PS417_18385 ribokinase 0.34 PS417_01210 hypothetical protein — —
Bacteroides thetaiotaomicron VPI-5482 0.36 BT2803 ribokinase (EC 2.7.1.15) (from data) 0.73 BT2790 phosphoenolpyruvate carboxykinase [ATP] (NCBI ptt file) — —
Pseudomonas sp. DMC3 0.35 GFF901 Ribokinase 0.33 GFF4175 Phosphoenolpyruvate carboxykinase (ATP) low > 89
Pseudomonas fluorescens FW300-N2E2 0.35 Pf6N2E2_165 Ribokinase (EC 2.7.1.15) 0.32 Pf6N2E2_3899 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) low > 103
Pseudomonas fluorescens GW456-L13 0.35 PfGW456L13_3908 Ribokinase (EC 2.7.1.15) 0.33 PfGW456L13_420 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) low > 87
Pseudomonas fluorescens FW300-N2C3 0.35 AO356_00950 Ribokinase (EC 2.7.1.15) (from data) 0.32 AO356_10140 phosphoenolpyruvate carboxykinase [ATP] low > 104
Pseudomonas fluorescens FW300-N1B4 0.35 Pf1N1B4_6031 Ribokinase (EC 2.7.1.15) (from data) 0.34 Pf1N1B4_1779 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) — —
Pseudomonas lactucae CFBP13502 0.34 GEMAOFIL_03907 Ribokinase 0.35 GEMAOFIL_00469 Phosphoenolpyruvate carboxykinase (ATP) low > 96
Pseudomonas sp. RS175 0.34 PFR28_02733 Ribokinase 0.34 PFR28_04874 Phosphoenolpyruvate carboxykinase (ATP) low > 88
Pseudomonas orientalis W4I3 0.34 QF045_RS20535 ribokinase 0.35 QF045_RS04340 phosphoenolpyruvate carboxykinase low > 93
Pseudomonas sp. SVBP6 0.34 COO64_RS10345 rbsK ribokinase 0.33 COO64_RS00660 phosphoenolpyruvate carboxykinase low > 93
Pseudomonas sp. BP01 0.33 JOY50_RS04290 rbsK ribokinase 0.33 JOY50_RS18315 phosphoenolpyruvate carboxykinase low > 84
Pseudomonas fluorescens SBW25 0.33 PFLU_RS20360 ribokinase 0.34 PFLU_RS01320 phosphoenolpyruvate carboxykinase low > 109
Pseudomonas fluorescens SBW25-INTG 0.33 PFLU_RS20360 ribokinase 0.34 PFLU_RS01320 phosphoenolpyruvate carboxykinase low > 109
Pseudomonas fluorescens FW300-N2E3 0.32 AO353_20835 Ribokinase (EC 2.7.1.15) (from data) 0.33 AO353_11775 phosphoenolpyruvate carboxykinase [ATP] low > 101
Dinoroseobacter shibae DFL-12 0.30 Dshi_1976 PfkB domain protein (RefSeq) 0.39 Dshi_0213 Phosphoenolpyruvate carboxykinase (ATP) (RefSeq) low > 64
Alteromonas macleodii MIT1002 0.30 MIT1002_02988 Ribokinase 0.36 MIT1002_03972 Phosphoenolpyruvate carboxykinase [ATP] low > 70
Agrobacterium fabrum C58 0.27 Atu4847 ribokinase 0.42 Atu0035 phosphoenolpyruvate carboxykinase low > 89
Sinorhizobium meliloti 1021 0.26 SMc01103 Ribokinase (EC 2.7.1.15) (from data) 0.41 SMc02562 phosphoenolpyruvate carboxykinase low > 103
Rhizobium sp. OAE497 0.23 ABIE40_RS01880 ribokinase 0.40 ABIE40_RS19415 phosphoenolpyruvate carboxykinase low > 107
Sphingomonas koreensis DSMZ 15582 0.23 Ga0059261_0568 Sugar kinases, ribokinase family 0.39 Ga0059261_0913 phosphoenolpyruvate carboxykinase (ATP) — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.22 CA264_03275 ribokinase 0.44 CA264_05270 phosphoenolpyruvate carboxykinase (ATP) — —
Bosea sp. OAE506 0.22 ABIE41_RS03745 ribokinase 0.40 ABIE41_RS02665 phosphoenolpyruvate carboxykinase low > 77
Phaeobacter inhibens DSM 17395 0.17 PGA1_c34980 putative pfkB family carbohydrate kinase 0.39 PGA1_c01140 phosphoenolpyruvate carboxykinase low > 62
Kangiella aquimarina DSM 16071 0.12 B158DRAFT_1294 Sugar kinases, ribokinase family 0.76 B158DRAFT_2395 phosphoenolpyruvate carboxykinase (ATP) low > 40
Rhodopseudomonas palustris CGA009 0.12 TX73_003165 sugar kinase 0.42 TX73_001865 phosphoenolpyruvate carboxykinase — —

Not shown: 31 genomes with orthologs for CSW01_14665 only; 15 genomes with orthologs for CSW01_13810 only