Conservation of cofitness between CSW01_03205 and CSW01_13635 in Vibrio cholerae E7946 ATCC 55056

45 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_03205 iron ABC transporter substrate-binding protein 1.0 CSW01_13635 thiol:disulfide interchange protein DsbD 0.92 18
Shewanella amazonensis SB2B 0.67 Sama_0666 iron(III) ABC transporter, periplasmic iron(III)-binding protein (RefSeq) 0.42 Sama_0538 dipZ thiol:disulfide interchange protein precursor (RefSeq) low > 62
Shewanella loihica PV-4 0.66 Shew_0861 extracellular solute-binding protein (RefSeq) 0.42 Shew_3266 dipZ thiol:disulfide interchange protein precursor (RefSeq) low > 60
Shewanella oneidensis MR-1 0.64 SO0744 iron(III) ABC transporter, periplasmic iron(III)-binding protein (NCBI ptt file) 0.44 SO0696 dsbD thiol:disulfide interchange protein DsbD (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.64 Shewana3_3517 extracellular solute-binding protein (RefSeq) 0.43 Shewana3_3576 dipZ thiol:disulfide interchange protein precursor (RefSeq) low > 73
Marinobacter adhaerens HP15 0.53 HP15_1456 extracellular solute-binding protein, family 1 0.30 HP15_2101 membrane protein containing cytochrome c assembly protein, transmembrane region domain low > 73
Castellaniella sp019104865 MT123 0.44 ABCV34_RS03555 Fe(3+) ABC transporter substrate-binding protein 0.27 ABCV34_RS03205 protein-disulfide reductase DsbD
Rahnella sp. WP5 0.43 EX31_RS17570 extracellular solute-binding protein 0.46 EX31_RS08975 protein-disulfide reductase DsbD low > 89
Pectobacterium carotovorum WPP14 0.43 HER17_RS14365 Fe(3+) ABC transporter substrate-binding protein 0.47 HER17_RS18850 protein-disulfide reductase DsbD 0.74 2
Dechlorosoma suillum PS 0.36 Dsui_2928 ABC-type Fe3+ transport system, periplasmic component 0.31 Dsui_0718 thiol:disulfide interchange protein
Cupriavidus basilensis FW507-4G11 0.35 RR42_RS04335 iron deficiency-induced protein A 0.29 RR42_RS19110 thiol:disulfide interchange protein
Pseudomonas sp. SVBP6 0.34 COO64_RS00970 extracellular solute-binding protein 0.24 COO64_RS18765 dsbD protein-disulfide reductase DsbD low > 93
Pseudomonas stutzeri RCH2 0.34 Psest_0179 ABC-type Fe3+ transport system, periplasmic component 0.27 Psest_1603 Thiol:disulfide interchange protein
Pseudomonas putida KT2440 0.33 PP_5196 putative iron(III)|iron ABC transporter, periplasmic iron-binding protein 0.25 PP_0561 thiol/disulfide interchange protein 1 low > 96
Pseudomonas sp. S08-1 0.32 OH686_11185 Ferric iron ABC transporter, iron-binding protein 0.23 OH686_07580 Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase
Pseudomonas fluorescens FW300-N2C3 0.32 AO356_13025 iron ABC transporter substrate-binding protein 0.28 AO356_02870 thiol:disulfide interchange protein
Pseudomonas sp. BP01 0.32 JOY50_RS22425 extracellular solute-binding protein 0.26 JOY50_RS23140 protein-disulfide reductase DsbD low > 84
Pseudomonas lactucae CFBP13502 0.32 GEMAOFIL_05591 putative binding protein component of ABC iron transporter 0.25 GEMAOFIL_04105 Thiol:disulfide interchange protein DsbD
Pseudomonas fluorescens SBW25-INTG 0.32 PFLU_RS28925 extracellular solute-binding protein 0.25 PFLU_RS21490 protein-disulfide reductase DsbD
Pseudomonas fluorescens SBW25 0.32 PFLU_RS28925 extracellular solute-binding protein 0.25 PFLU_RS21490 protein-disulfide reductase DsbD
Pseudomonas fluorescens FW300-N2E2 0.32 Pf6N2E2_4483 Ferric iron ABC transporter, iron-binding protein 0.28 Pf6N2E2_2398 Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC 1.8.1.8)
Pseudomonas simiae WCS417 0.32 PS417_27265 iron ABC transporter substrate-binding protein 0.26 PS417_19525 thiol:disulfide interchange protein
Pseudomonas orientalis W4I3 0.32 QF045_RS01635 extracellular solute-binding protein 0.26 QF045_RS21665 protein-disulfide reductase DsbD
Pseudomonas segetis P6 0.32 MPMX49_04483 putative binding protein component of ABC iron transporter 0.26 MPMX49_04100 Thiol:disulfide interchange protein DsbD
Pseudomonas fluorescens FW300-N1B4 0.32 Pf1N1B4_2232 Ferric iron ABC transporter, iron-binding protein 0.27 Pf1N1B4_210 Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC 1.8.1.8) low > 87
Pseudomonas aeruginosa MRSN321 0.32 DY961_RS11955 extracellular solute-binding protein 0.24 DY961_RS05265 protein-disulfide reductase DsbD low > 100
Pseudomonas aeruginosa PUPa3 0.32 DQ20_RS50160 extracellular solute-binding protein 0.24 DQ20_RS55390 protein-disulfide reductase DsbD low > 101
Pseudomonas aeruginosa PA14 0.32 IKLFDK_27385 putative binding protein component of ABC iron transporter PA5217 0.24 IKLFDK_12170 Thiol:disulfide interchange protein DsbD 2 low > 98
Pseudomonas sp. RS175 0.32 PFR28_04318 putative binding protein component of ABC iron transporter 0.27 PFR28_01029 Thiol:disulfide interchange protein DsbD
Pseudomonas fluorescens GW456-L13 0.32 PfGW456L13_900 Ferric iron ABC transporter, iron-binding protein 0.28 PfGW456L13_2298 Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC 1.8.1.8) low > 87
Pseudomonas fluorescens FW300-N2E3 0.31 AO353_08745 iron ABC transporter substrate-binding protein 0.25 AO353_19365 thiol:disulfide interchange protein 0.35 1
Herbaspirillum seropedicae SmR1 0.31 HSERO_RS09445 iron deficiency-induced protein A 0.29 HSERO_RS00715 thiol:disulfide interchange protein
Pseudomonas syringae pv. syringae B728a ΔmexB 0.31 Psyr_0244 extracellular solute-binding protein, family 1 0.24 Psyr_4398 Protein-disulfide reductase
Pseudomonas syringae pv. syringae B728a 0.31 Psyr_0244 extracellular solute-binding protein, family 1 0.24 Psyr_4398 Protein-disulfide reductase
Pseudomonas sp. DMC3 0.31 GFF312 putative binding protein component of ABC iron transporter 0.29 GFF4549 Thiol:disulfide interchange protein DsbD
Kangiella aquimarina DSM 16071 0.31 B158DRAFT_0540 ABC-type Fe3+ transport system, periplasmic component 0.32 B158DRAFT_0153 Thiol:disulfide interchange protein
Burkholderia phytofirmans PsJN 0.20 BPHYT_RS23970 iron ABC transporter substrate-binding protein 0.23 BPHYT_RS17970 thiol:disulfide interchange protein
Erwinia tracheiphila HP pepo 2.2 0.15 IJEDHG_05510 iron ABC transporter substrate-binding protein 0.40 IJEDHG_07065 Thiol:disulfide interchange protein DsbD low > 61
Erwinia tracheiphila SCR3 0.15 LU632_RS03345 iron ABC transporter substrate-binding protein 0.40 LU632_RS01840 protein-disulfide reductase DsbD low > 73
Enterobacter asburiae PDN3 0.14 EX28DRAFT_2437 ABC-type Fe3+ transport system, periplasmic component 0.46 EX28DRAFT_3333 Thiol:disulfide interchange protein low > 76
Enterobacter sp. TBS_079 0.14 MPMX20_01119 Fe(3+)-binding periplasmic protein 0.45 MPMX20_00416 Thiol:disulfide interchange protein DsbD low > 85
Dickeya dadantii 3937 0.14 DDA3937_RS08590 iron ABC transporter substrate-binding protein 0.43 DDA3937_RS02705 protein-disulfide reductase DsbD low > 74
Klebsiella michiganensis M5al 0.13 BWI76_RS10470 iron ABC transporter substrate-binding protein 0.47 BWI76_RS02315 protein-disulfide reductase DsbD low > 92
Serratia liquefaciens MT49 0.13 IAI46_13015 iron ABC transporter substrate-binding protein 0.45 IAI46_01465 protein-disulfide reductase DsbD low > 87
Dickeya dianthicola ME23 0.13 DZA65_RS09025 iron ABC transporter substrate-binding protein 0.42 DZA65_RS02835 protein-disulfide reductase DsbD low > 75
Dickeya dianthicola 67-19 0.13 HGI48_RS08730 iron ABC transporter substrate-binding protein 0.42 HGI48_RS02680 protein-disulfide reductase DsbD low > 71

Not shown: 17 genomes with orthologs for CSW01_03205 only; 31 genomes with orthologs for CSW01_13635 only