Conservation of cofitness between CSW01_01485 and CSW01_13635 in Vibrio cholerae E7946 ATCC 55056

60 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_01485 transcriptional regulator 1.0 CSW01_13635 thiol:disulfide interchange protein DsbD 0.93 15
Erwinia amylovora T8 0.56 OLJFJH_04280 gluconate operon transcriptional repressor GntR 0.42 OLJFJH_02625 protein-disulfide reductase DsbD low > 58
Dickeya dianthicola ME23 0.55 DZA65_RS20970 gluconate operon transcriptional repressor GntR 0.42 DZA65_RS02835 protein-disulfide reductase DsbD low > 75
Dickeya dadantii 3937 0.55 DDA3937_RS19785 gluconate operon transcriptional repressor GntR 0.43 DDA3937_RS02705 protein-disulfide reductase DsbD low > 74
Dickeya dianthicola 67-19 0.55 HGI48_RS19900 gluconate operon transcriptional repressor GntR 0.42 HGI48_RS02680 protein-disulfide reductase DsbD low > 71
Erwinia tracheiphila HP pepo 2.2 0.54 IJEDHG_08040 gntR gluconate operon transcriptional repressor GntR 0.40 IJEDHG_07065 Thiol:disulfide interchange protein DsbD low > 61
Rahnella sp. WP5 0.54 EX31_RS05060 gluconate operon transcriptional repressor GntR 0.46 EX31_RS08975 protein-disulfide reductase DsbD low > 89
Serratia liquefaciens MT49 0.54 IAI46_23965 gluconate operon transcriptional repressor GntR 0.45 IAI46_01465 protein-disulfide reductase DsbD low > 86
Erwinia tracheiphila SCR3 0.53 LU632_RS19160 gntR gluconate operon transcriptional repressor GntR 0.40 LU632_RS01840 protein-disulfide reductase DsbD low > 74
Pectobacterium carotovorum WPP14 0.52 HER17_RS01450 gluconate operon transcriptional repressor GntR 0.47 HER17_RS18850 protein-disulfide reductase DsbD low > 75
Escherichia coli ECOR38 0.52 HEPCGN_15660 gntR gluconate operon transcriptional repressor GntR 0.46 HEPCGN_10675 dsbD protein-disulfide reductase DsbD low > 88
Escherichia coli ECRC100 0.52 OKFHMN_16835 gntR gluconate operon transcriptional repressor GntR 0.47 OKFHMN_12450 dsbD protein-disulfide reductase DsbD low > 79
Escherichia coli ECRC101 0.52 MCAODC_07365 gntR gluconate operon transcriptional repressor GntR 0.46 MCAODC_02960 dsbD protein-disulfide reductase DsbD low > 88
Escherichia fergusonii Becca 0.52 EFB2_00382 HTH-type transcriptional regulator GntR 0.47 EFB2_04399 Thiol:disulfide interchange protein DsbD low > 86
Pantoea sp. MT58 0.52 IAI47_01650 gluconate operon transcriptional repressor GntR 0.43 IAI47_17335 protein-disulfide reductase DsbD low > 76
Escherichia coli ECRC102 0.52 NIAGMN_14605 gntR gluconate operon transcriptional repressor GntR 0.47 NIAGMN_10295 dsbD protein-disulfide reductase DsbD low > 80
Escherichia coli HS(pFamp)R (ATCC 700891) 0.52 OHPLBJKB_00264 HTH-type transcriptional regulator GntR 0.47 OHPLBJKB_03907 Thiol:disulfide interchange protein DsbD low > 74
Escherichia coli Nissle 1917 0.52 ECOLIN_RS19675 gluconate operon transcriptional repressor GntR 0.47 ECOLIN_RS24030 protein-disulfide reductase DsbD low > 55
Escherichia coli ECRC62 0.52 BNILDI_02870 gntR gluconate operon transcriptional repressor GntR 0.47 BNILDI_06775 dsbD protein-disulfide reductase DsbD low > 75
Escherichia coli ECRC98 0.52 JDDGAC_20465 gntR gluconate operon transcriptional repressor GntR 0.47 JDDGAC_16085 dsbD protein-disulfide reductase DsbD low > 87
Escherichia coli BW25113 0.52 b3438 gntR DNA-binding transcriptional repressor (NCBI) 0.47 b4136 dipZ thiol:disulfide interchange protein precursor (NCBI) low > 76
Escherichia coli ECRC99 0.52 KEDOAH_11305 gntR gluconate operon transcriptional repressor GntR 0.47 KEDOAH_15715 dsbD protein-disulfide reductase DsbD — —
Enterobacter sp. TBS_079 0.52 MPMX20_04319 HTH-type transcriptional regulator GntR 0.45 MPMX20_00416 Thiol:disulfide interchange protein DsbD low > 85
Klebsiella pneumoniae MKP103 0.51 KDGMDA_07120 gluconate operon transcriptional repressor GntR 0.45 KDGMDA_10805 Thiol:disulfide interchange protein DsbD low > 95
Escherichia coli BL21 0.51 ECD_03289 d-gluconate inducible gluconate regulon transcriptional repressor 0.47 ECD_04006 thiol:disulfide interchange protein and activator of DsbC low > 61
Escherichia coli ECOR27 0.51 NOLOHH_08635 gntR gluconate operon transcriptional repressor GntR 0.47 NOLOHH_04715 dsbD protein-disulfide reductase DsbD low > 76
Klebsiella michiganensis M5al 0.51 BWI76_RS26245 transcriptional regulator 0.47 BWI76_RS02315 protein-disulfide reductase DsbD low > 92
Enterobacter asburiae PDN3 0.51 EX28DRAFT_4274 transcriptional regulator, LacI family 0.46 EX28DRAFT_3333 Thiol:disulfide interchange protein low > 76
Pantoea agglomerans CFBP13505 P0401 0.50 PagCFBP13505_RS18155 gluconate operon transcriptional repressor GntR 0.44 PagCFBP13505_RS09505 protein-disulfide reductase DsbD low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.49 GFF570 Gluconate utilization system Gnt-I transcriptional repressor 0.46 GFF2016 Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC 1.8.1.8) low > 78
Pseudomonas aeruginosa PA14 0.36 IKLFDK_11375 LacI family DNA-binding transcriptional regulator GntR 0.24 IKLFDK_12170 Thiol:disulfide interchange protein DsbD 2 low > 100
Pseudomonas fluorescens FW300-N1B4 0.35 Pf1N1B4_558 Gluconate utilization system Gnt-I transcriptional repressor 0.27 Pf1N1B4_210 Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC 1.8.1.8) low > 87
Pseudomonas fluorescens GW456-L13 0.34 PfGW456L13_1925 Gluconate utilization system Gnt-I transcriptional repressor 0.28 PfGW456L13_2298 Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC 1.8.1.8) low > 87
Pseudomonas lactucae CFBP13502 0.34 GEMAOFIL_04536 HTH-type transcriptional regulator GntR 0.25 GEMAOFIL_04105 Thiol:disulfide interchange protein DsbD — —
Pseudomonas fluorescens SBW25-INTG 0.34 PFLU_RS23595 LacI family DNA-binding transcriptional regulator 0.25 PFLU_RS21490 protein-disulfide reductase DsbD — —
Pseudomonas stutzeri RCH2 0.34 Psest_2126 Transcriptional regulators 0.27 Psest_1603 Thiol:disulfide interchange protein low > 67
Pseudomonas fluorescens SBW25 0.34 PFLU_RS23595 LacI family DNA-binding transcriptional regulator 0.25 PFLU_RS21490 protein-disulfide reductase DsbD — —
Pseudomonas sp. RS175 0.34 PFR28_00593 HTH-type transcriptional regulator GntR 0.27 PFR28_01029 Thiol:disulfide interchange protein DsbD — —
Pseudomonas fluorescens FW300-N2C3 0.34 AO356_05065 LacI family transcriptional regulator 0.28 AO356_02870 thiol:disulfide interchange protein — —
Pseudomonas fluorescens FW300-N2E2 0.34 Pf6N2E2_2865 Gluconate utilization system Gnt-I transcriptional repressor 0.28 Pf6N2E2_2398 Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC 1.8.1.8) — —
Herbaspirillum seropedicae SmR1 0.34 HSERO_RS05460 LacI family transcription regulator 0.29 HSERO_RS00715 thiol:disulfide interchange protein — —
Pseudomonas sp. SVBP6 0.34 COO64_RS25590 LacI family DNA-binding transcriptional regulator 0.24 COO64_RS18765 dsbD protein-disulfide reductase DsbD low > 93
Pseudomonas simiae WCS417 0.33 PS417_21990 LacI family transcriptional regulator 0.26 PS417_19525 thiol:disulfide interchange protein — —
Pseudomonas fluorescens FW300-N2E3 0.33 AO353_03255 LacI family transcriptional regulator 0.25 AO353_19365 thiol:disulfide interchange protein low > 101
Pseudomonas sp. DMC3 0.33 GFF5268 HTH-type transcriptional regulator GntR 0.29 GFF4549 Thiol:disulfide interchange protein DsbD — —
Pseudomonas segetis P6 0.33 MPMX49_02373 HTH-type transcriptional regulator GntR 0.26 MPMX49_04100 Thiol:disulfide interchange protein DsbD — —
Burkholderia phytofirmans PsJN 0.32 BPHYT_RS00410 LacI family transcription regulator 0.23 BPHYT_RS17970 thiol:disulfide interchange protein — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.32 Psyr_3336 transcriptional regulator, LacI family 0.24 Psyr_4398 Protein-disulfide reductase — —
Pseudomonas syringae pv. syringae B728a 0.32 Psyr_3336 transcriptional regulator, LacI family 0.24 Psyr_4398 Protein-disulfide reductase — —
Alteromonas macleodii MIT1002 0.31 MIT1002_03475 Gluconate utilization system GNT-I transcriptional repressor 0.38 MIT1002_03939 Thiol:disulfide interchange protein DsbD precursor — —
Pseudomonas sp. BP01 0.31 JOY50_RS23605 LacI family DNA-binding transcriptional regulator 0.26 JOY50_RS23140 protein-disulfide reductase DsbD low > 84
Pseudomonas putida KT2440 0.31 PP_3415 Transcriptional regulator, LacI family 0.25 PP_0561 thiol/disulfide interchange protein 1 low > 96
Paraburkholderia bryophila 376MFSha3.1 0.30 H281DRAFT_05920 transcriptional regulator, LacI family 0.23 H281DRAFT_05598 thiol:disulfide interchange protein DsbD — —
Paraburkholderia sabiae LMG 24235 0.29 QEN71_RS13585 LacI family DNA-binding transcriptional regulator 0.23 QEN71_RS28120 protein-disulfide reductase DsbD — —
Castellaniella sp019104865 MT123 0.26 ABCV34_RS12285 LacI family DNA-binding transcriptional regulator 0.27 ABCV34_RS03205 protein-disulfide reductase DsbD low > 48
Ralstonia sp. UNC404CL21Col 0.26 ABZR87_RS18255 LacI family DNA-binding transcriptional regulator 0.28 ABZR87_RS02695 protein-disulfide reductase DsbD — —
Ralstonia solanacearum GMI1000 0.26 RS_RS24865 LacI family DNA-binding transcriptional regulator 0.27 RS_RS14985 thiol:disulfide interchange protein DsbD — —
Cupriavidus basilensis FW507-4G11 0.26 RR42_RS22645 GntR family transcriptional regulator 0.29 RR42_RS19110 thiol:disulfide interchange protein — —
Ralstonia solanacearum PSI07 0.26 RPSI07_RS07575 LacI family DNA-binding transcriptional regulator 0.28 RPSI07_RS10195 protein-disulfide reductase DsbD low > 81
Ralstonia solanacearum UW163 0.24 UW163_RS16860 GntR family transcriptional regulator 0.27 UW163_RS06570 protein-disulfide reductase DsbD — —
Ralstonia solanacearum IBSBF1503 0.24 RALBFv3_RS16125 GntR family transcriptional regulator 0.27 RALBFv3_RS07045 protein-disulfide reductase DsbD low > 76

Not shown: 12 genomes with orthologs for CSW01_01485 only; 13 genomes with orthologs for CSW01_13635 only