| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_07225 | | cytochrome-c oxidase, cbb3-type subunit II | 1.0 | CSW01_12445 | | DNA repair protein RecO | 0.46 | 3 |
| Alteromonas macleodii MIT1002 | 0.77 | MIT1002_02130 | | cbb3-type cytochrome c oxidase subunit II | 0.31 | MIT1002_00790 | | Recombination protein O | low | > 70 |
| Shewanella amazonensis SB2B | 0.76 | Sama_1792 | | cytochrome c oxidase, cbb3-type, subunit II (RefSeq) | 0.26 | Sama_0882 | | DNA repair protein RecO (RefSeq) | low | > 62 |
| Shewanella oneidensis MR-1 | 0.74 | SO2363 | ccoO | cytochrome c oxidase, cbb3-type, subunit II (NCBI ptt file) | 0.28 | SO1350 | recO | DNA repair protein RecO (NCBI ptt file) | low | > 76 |
| Shewanella loihica PV-4 | 0.74 | Shew_1986 | | cytochrome c oxidase, cbb3-type, subunit II (RefSeq) | 0.27 | Shew_1056 | | DNA repair protein RecO (RefSeq) | — | — |
| Shewanella sp. ANA-3 | 0.74 | Shewana3_2108 | | cytochrome c oxidase, cbb3-type, subunit II (RefSeq) | 0.28 | Shewana3_3024 | | DNA repair protein RecO (RefSeq) | — | — |
| Pseudomonas aeruginosa PA14 | 0.71 | IKLFDK_07425 | | cytochrome-c oxidase cbb3-type subunit II | 0.29 | IKLFDK_03315 | | DNA repair protein RecO | low | > 100 |
| Pseudomonas stutzeri RCH2 | 0.70 | Psest_2528 | | cytochrome c oxidase, cbb3-type, subunit II | 0.28 | Psest_3090 | | DNA repair protein RecO | — | — |
| Kangiella aquimarina DSM 16071 | 0.70 | B158DRAFT_1967 | | cytochrome c oxidase, cbb3-type, subunit II | 0.29 | B158DRAFT_2189 | | DNA replication and repair protein RecO | low | > 40 |
| Pseudomonas fluorescens FW300-N2E3 | 0.69 | AO353_00590 | | cytochrome C oxidase Cbb3 | 0.28 | AO353_04500 | | DNA repair protein RecO | low | > 101 |
| Pseudomonas sp. S08-1 | 0.69 | OH686_02195 | | cytochrome c oxidase, cbb3-type, subunit II | 0.28 | OH686_20090 | | DNA repair protein RecO | low | > 80 |
| Pseudomonas sp. SVBP6 | 0.69 | COO64_RS18685 | ccoO | cytochrome-c oxidase, cbb3-type subunit II | 0.24 | COO64_RS16565 | recO | DNA repair protein RecO | low | > 93 |
| Pseudomonas putida KT2440 | 0.69 | PP_4251 | | cytochrome c oxidase subunit, cbb3-type | 0.25 | PP_1435 | | DNA repair protein RecO | low | > 96 |
| Pseudomonas sp. BP01 | 0.69 | JOY50_RS00060 | ccoO | cytochrome-c oxidase, cbb3-type subunit II | 0.24 | JOY50_RS14705 | recO | DNA repair protein RecO | low | > 84 |
| Pseudomonas segetis P6 | 0.69 | MPMX49_02313 | | hypothetical protein | 0.28 | MPMX49_01410 | | DNA repair protein RecO | — | — |
| Pseudomonas sp. DMC3 | 0.68 | GFF728 | | hypothetical protein | 0.27 | GFF1959 | | DNA repair protein RecO | low | > 89 |
| Pseudomonas fluorescens FW300-N2C3 | 0.68 | AO356_02430 | | cytochrome C oxidase Cbb3 | 0.27 | AO356_17505 | | DNA repair protein RecO | low | > 104 |
| Pseudomonas fluorescens FW300-N2E2 | 0.68 | Pf6N2E2_2311 | | Cytochrome c oxidase subunit CcoO (EC 1.9.3.1) | 0.28 | Pf6N2E2_5428 | | DNA recombination and repair protein RecO | low | > 103 |
| Pseudomonas fluorescens GW456-L13 | 0.67 | PfGW456L13_4062 | | Cytochrome c oxidase subunit CcoO (EC 1.9.3.1) | 0.27 | PfGW456L13_4838 | | DNA recombination and repair protein RecO | low | > 87 |
| Pseudomonas sp. RS175 | 0.67 | PFR28_01090 | | hypothetical protein | 0.27 | PFR28_03521 | | DNA repair protein RecO | low | > 88 |
| Pseudomonas fluorescens FW300-N1B4 | 0.67 | Pf1N1B4_3878 | | Cytochrome c oxidase subunit CcoO (EC 1.9.3.1) | 0.27 | Pf1N1B4_890 | | DNA recombination and repair protein RecO | low | > 87 |
| Pseudomonas lactucae CFBP13502 | 0.66 | GEMAOFIL_04290 | | hypothetical protein | 0.27 | GEMAOFIL_01246 | | DNA repair protein RecO | low | > 93 |
| Pseudomonas simiae WCS417 | 0.66 | PS417_20725 | | cbb3-type cytochrome c oxidase subunit II | 0.27 | PS417_05200 | | DNA recombination protein RecO | low | > 88 |
| Pseudomonas fluorescens SBW25-INTG | 0.66 | PFLU_RS22345 | | cytochrome-c oxidase, cbb3-type subunit II | 0.27 | PFLU_RS05270 | | DNA repair protein RecO | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.66 | PFLU_RS22345 | | cytochrome-c oxidase, cbb3-type subunit II | 0.27 | PFLU_RS05270 | | DNA repair protein RecO | low | > 109 |
| Marinobacter adhaerens HP15 | 0.63 | HP15_2108 | | cytochrome c oxidase, cbb3-type, subunit II | 0.32 | HP15_786 | | DNA repair protein RecO | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.62 | RALBFv3_RS15620 | | cytochrome-c oxidase, cbb3-type subunit II | 0.27 | RALBFv3_RS14495 | | DNA repair protein RecO | low | > 76 |
| Pseudomonas syringae pv. syringae B728a | 0.62 | Psyr_3414 | | Cytochrome C oxidase, mono-heme subunit/FixO | 0.25 | Psyr_3949 | | DNA replication and repair protein RecO | — | — |
| Methylophilus sp. DMC18 | 0.62 | GFF1083 | | hypothetical protein | 0.24 | GFF2740 | | DNA repair protein RecO | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.62 | Psyr_3414 | | Cytochrome C oxidase, mono-heme subunit/FixO | 0.25 | Psyr_3949 | | DNA replication and repair protein RecO | — | — |
| Ralstonia solanacearum UW163 | 0.62 | UW163_RS13080 | | cytochrome-c oxidase, cbb3-type subunit II | 0.27 | UW163_RS11960 | | DNA repair protein RecO | — | — |
| Ralstonia sp. UNC404CL21Col | 0.62 | ABZR87_RS11150 | | cytochrome-c oxidase, cbb3-type subunit II | 0.28 | ABZR87_RS10215 | | DNA repair protein RecO | low | > 80 |
| Ralstonia solanacearum PSI07 | 0.62 | RPSI07_RS17735 | | cytochrome-c oxidase, cbb3-type subunit II | 0.28 | RPSI07_RS18965 | | DNA repair protein RecO | low | > 81 |
| Ralstonia solanacearum GMI1000 | 0.62 | RS_RS06400 | | cytochrome-c oxidase, cbb3-type subunit II | 0.29 | RS_RS05275 | | DNA repair protein RecO | low | > 80 |
| Lysobacter sp. OAE881 | 0.61 | ABIE51_RS03850 | | cytochrome-c oxidase, cbb3-type subunit II | 0.20 | ABIE51_RS13850 | | DNA repair protein RecO | low | > 62 |
| Dechlorosoma suillum PS | 0.60 | Dsui_1628 | | cytochrome c oxidase, cbb3-type, subunit II | 0.23 | Dsui_2462 | | DNA repair protein RecO | — | — |
| Rhodanobacter sp000427505 FW510-R12 | 0.57 | LRK53_RS11785 | | cytochrome-c oxidase, cbb3-type subunit II | 0.27 | LRK53_RS11965 | | DNA repair protein RecO | — | — |
| Rhodanobacter denitrificans MT42 | 0.57 | LRK55_RS17450 | | cytochrome-c oxidase, cbb3-type subunit II | 0.27 | LRK55_RS16695 | | DNA repair protein RecO | low | > 63 |
| Rhodanobacter denitrificans FW104-10B01 | 0.57 | LRK54_RS17225 | | cytochrome-c oxidase, cbb3-type subunit II | 0.27 | LRK54_RS16980 | | DNA repair protein RecO | low | > 59 |
| Dinoroseobacter shibae DFL-12 | 0.55 | Dshi_0662 | | cytochrome c oxidase, cbb3-type, subunit II (RefSeq) | 0.12 | Dshi_0203 | | DNA repair protein RecO (RefSeq) | low | > 64 |
| Rhodanobacter sp. FW510-T8 | 0.54 | OKGIIK_07660 | ccoO | cytochrome-c oxidase, cbb3-type subunit II | 0.26 | OKGIIK_07860 | recO | DNA repair protein RecO | low | > 53 |
| Dyella japonica UNC79MFTsu3.2 | 0.54 | ABZR86_RS04445 | | cytochrome-c oxidase, cbb3-type subunit II | 0.24 | ABZR86_RS07140 | | DNA repair protein RecO | low | > 74 |
Not shown: 21 genomes with orthologs for CSW01_07225 only; 32 genomes with orthologs for CSW01_12445 only