Conservation of cofitness between CSW01_11925 and CSW01_12330 in Vibrio cholerae E7946 ATCC 55056

58 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_11925 TatD family deoxyribonuclease 1.0 CSW01_12330 ADP-ribose diphosphatase 0.61 17
Enterobacter sp. TBS_079 0.42 MPMX20_00677 putative metal-dependent hydrolase YjjV 0.58 MPMX20_03881 ADP-ribose pyrophosphatase low > 85
Escherichia coli ECRC62 0.42 BNILDI_08020 tatD metal-dependent hydrolase 0.56 BNILDI_00900 nudF ADP-ribose diphosphatase low > 75
Enterobacter asburiae PDN3 0.42 EX28DRAFT_3587 Mg-dependent DNase 0.58 EX28DRAFT_3072 nudix-type nucleoside diphosphatase, YffH/AdpP family — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.41 OHPLBJKB_03683 putative metal-dependent hydrolase YjjV 0.56 OHPLBJKB_00669 ADP-ribose pyrophosphatase low > 73
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.41 GFF1040 Putative deoxyribonuclease YjjV 0.56 GFF3148 ADP-ribose pyrophosphatase (EC 3.6.1.13) low > 78
Escherichia fergusonii Becca 0.41 EFB2_04068 putative metal-dependent hydrolase YjjV 0.56 EFB2_00774 ADP-ribose pyrophosphatase low > 86
Escherichia coli ECOR38 0.41 HEPCGN_09265 tatD metal-dependent hydrolase 0.56 HEPCGN_17685 nudF ADP-ribose diphosphatase low > 87
Klebsiella michiganensis M5al 0.41 BWI76_RS04120 metal-dependent hydrolase 0.60 BWI76_RS24395 ADP-ribose diphosphatase low > 92
Escherichia coli BW25113 0.41 b4378 yjjV predicted DNase (NCBI) 0.56 b3034 nudF ADP-ribose pyrophosphatase (NCBI) low > 76
Escherichia coli BL21 0.41 ECD_04254 putative DNase 0.56 ECD_02906 ADP-ribose pyrophosphatase low > 61
Escherichia coli ECOR27 0.41 NOLOHH_03580 yjjV metal-dependent hydrolase 0.56 NOLOHH_10615 nudF ADP-ribose diphosphatase low > 75
Escherichia coli Nissle 1917 0.41 ECOLIN_RS25130 metal-dependent hydrolase 0.56 ECOLIN_RS17510 ADP-ribose diphosphatase low > 55
Escherichia coli ECRC101 0.41 MCAODC_01775 yjjV metal-dependent hydrolase 0.56 MCAODC_09325 nudF ADP-ribose diphosphatase low > 87
Escherichia coli ECRC98 0.41 JDDGAC_14855 yjjV metal-dependent hydrolase 0.56 JDDGAC_22445 nudF ADP-ribose diphosphatase low > 86
Escherichia coli ECRC99 0.41 KEDOAH_16885 yjjV metal-dependent hydrolase 0.56 KEDOAH_09335 nudF ADP-ribose diphosphatase — —
Dickeya dadantii 3937 0.41 DDA3937_RS02460 TatD family hydrolase 0.55 DDA3937_RS01745 ADP-ribose diphosphatase low > 74
Escherichia coli ECRC102 0.41 NIAGMN_09110 yjjV metal-dependent hydrolase 0.56 NIAGMN_16575 nudF ADP-ribose diphosphatase — —
Escherichia coli ECRC100 0.41 OKFHMN_11260 yjjV metal-dependent hydrolase 0.56 OKFHMN_18810 nudF ADP-ribose diphosphatase low > 80
Pectobacterium carotovorum WPP14 0.40 HER17_RS19045 TatD family hydrolase 0.52 HER17_RS19820 ADP-ribose diphosphatase low > 75
Dickeya dianthicola ME23 0.40 DZA65_RS02520 metal-dependent hydrolase 0.54 DZA65_RS01715 ADP-ribose diphosphatase low > 75
Dickeya dianthicola 67-19 0.40 HGI48_RS02415 TatD family hydrolase 0.54 HGI48_RS01640 ADP-ribose diphosphatase low > 71
Pantoea sp. MT58 0.39 IAI47_03395 metal-dependent hydrolase 0.59 IAI47_03140 ADP-ribose diphosphatase low > 76
Erwinia amylovora T8 0.38 OLJFJH_01630 metal-dependent hydrolase 0.57 OLJFJH_07680 ADP-ribose diphosphatase low > 58
Serratia liquefaciens MT49 0.38 IAI46_02900 TatD family hydrolase 0.58 IAI46_21940 ADP-ribose diphosphatase low > 86
Erwinia tracheiphila SCR3 0.38 LU632_RS02510 TatD family hydrolase 0.58 LU632_RS20630 nudF ADP-ribose diphosphatase low > 74
Rahnella sp. WP5 0.36 EX31_RS04070 deoxyribonuclease YjjV 0.55 EX31_RS08095 ADP-ribose diphosphatase low > 89
Marinobacter adhaerens HP15 0.36 HP15_542 TatD-related deoxyribonuclease 0.45 HP15_454 nucleoside diphosphate pyrophosphatase low > 73
Pseudomonas aeruginosa PA14 0.35 IKLFDK_18190 TatD family deoxyribonuclease 0.45 IKLFDK_28685 ADP-ribose diphosphatase low > 101
Alteromonas macleodii MIT1002 0.35 MIT1002_02710 putative deoxyribonuclease YjjV 0.50 MIT1002_00671 ADP-ribose pyrophosphatase low > 70
Pseudomonas fluorescens SBW25 0.32 PFLU_RS04000 TatD family hydrolase 0.45 PFLU_RS02445 NUDIX domain-containing protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.32 PFLU_RS04000 TatD family hydrolase 0.45 PFLU_RS02445 NUDIX domain-containing protein low > 109
Pseudomonas sp. S08-1 0.32 OH686_16550 Putative deoxyribonuclease YjjV 0.48 OH686_15835 ADP-ribose pyrophosphatase low > 80
Pseudomonas sp. SVBP6 0.32 COO64_RS11265 TatD family hydrolase 0.44 COO64_RS17770 NUDIX domain-containing protein low > 93
Pseudomonas sp. BP01 0.32 JOY50_RS19325 TatD family hydrolase 0.46 JOY50_RS17105 NUDIX domain-containing protein low > 84
Pseudomonas fluorescens FW300-N2E2 0.32 Pf6N2E2_3341 Putative deoxyribonuclease YjjV 0.45 Pf6N2E2_3641 ADP-ribose pyrophosphatase (EC 3.6.1.13) low > 103
Pseudomonas fluorescens FW300-N1B4 0.32 Pf1N1B4_1148 Putative deoxyribonuclease YjjV 0.44 Pf1N1B4_1444 ADP-ribose pyrophosphatase (EC 3.6.1.13) low > 87
Pseudomonas stutzeri RCH2 0.32 Psest_0728 hydrolase, TatD family 0.46 Psest_0479 nudix-type nucleoside diphosphatase, YffH/AdpP family low > 67
Kangiella aquimarina DSM 16071 0.32 B158DRAFT_2240 Mg-dependent DNase 0.42 B158DRAFT_0975 nudix-type nucleoside diphosphatase, YffH/AdpP family low > 40
Pseudomonas sp. RS175 0.32 PFR28_00103 putative metal-dependent hydrolase YjjV 0.45 PFR28_05094 ADP-ribose pyrophosphatase low > 88
Pseudomonas fluorescens GW456-L13 0.31 PfGW456L13_5078 Putative deoxyribonuclease YjjV 0.45 PfGW456L13_182 ADP-ribose pyrophosphatase (EC 3.6.1.13) low > 87
Pseudomonas sp. DMC3 0.31 GFF5001 putative metal-dependent hydrolase YjjV 0.44 GFF3186 ADP-ribose pyrophosphatase low > 89
Pseudomonas fluorescens FW300-N2E3 0.31 AO353_05495 hydrolase TatD 0.44 AO353_13025 ADP-ribose pyrophosphatase low > 101
Pseudomonas simiae WCS417 0.31 PS417_03955 hydrolase TatD 0.45 PS417_02370 ADP-ribose pyrophosphatase low > 88
Pseudomonas fluorescens FW300-N2C3 0.31 AO356_07345 hydrolase TatD 0.46 AO356_08795 ADP-ribose pyrophosphatase low > 104
Pseudomonas syringae pv. syringae B728a 0.30 Psyr_0819 TatD-related deoxyribonuclease 0.45 Psyr_0547 Conserved hypothetical protein 52 low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.30 Psyr_0819 TatD-related deoxyribonuclease 0.45 Psyr_0547 Conserved hypothetical protein 52 low > 86
Xanthomonas campestris pv. campestris strain 8004 0.30 Xcc-8004.3493.1 Putative deoxyribonuclease YjjV 0.17 Xcc-8004.1945.1 GDP-mannose pyrophosphatase YffH low > 74
Acinetobacter radioresistens SK82 0.29 MPMX26_00479 putative metal-dependent hydrolase YjjV 0.35 MPMX26_00179 ADP-ribose pyrophosphatase low > 36
Shewanella oneidensis MR-1 0.29 SO1213 hydrolase, TatD family (NCBI ptt file) 0.49 SO3903 MutT/nudix family protein (NCBI ptt file) low > 76
Pseudomonas putida KT2440 0.29 PP_0791 putative hydrolase 0.46 PP_4919 ADP-ribose/sugar pyrophosphatase low > 96
Shewanella sp. ANA-3 0.29 Shewana3_1038 TatD-related deoxyribonuclease (RefSeq) 0.50 Shewana3_0726 nucleoside diphosphate pyrophosphatase (RefSeq) low > 73
Paraburkholderia graminis OAS925 0.27 ABIE53_002767 TatD DNase family protein 0.22 ABIE53_006434 nudix-type nucleoside diphosphatase (YffH/AdpP family) low > 113
Paraburkholderia bryophila 376MFSha3.1 0.27 H281DRAFT_00492 TatD DNase family protein 0.22 H281DRAFT_02692 nudix-type nucleoside diphosphatase, YffH/AdpP family low > 103
Acidovorax sp. GW101-3H11 0.26 Ac3H11_1737 Putative deoxyribonuclease YjjV 0.19 Ac3H11_4083 GDP-mannose pyrophosphatase YffH low > 79
Paraburkholderia sabiae LMG 24235 0.26 QEN71_RS05855 TatD family hydrolase 0.21 QEN71_RS08520 NUDIX domain-containing protein low > 153
Variovorax sp. OAS795 0.25 ABID97_RS22725 TatD family hydrolase 0.18 ABID97_RS01680 GDP-mannose pyrophosphatase 0.37 24
Burkholderia phytofirmans PsJN 0.24 BPHYT_RS12705 DNAase 0.23 BPHYT_RS24585 NUDIX hydrolase low > 109
Shewanella amazonensis SB2B 0.22 Sama_0970 TatD-related deoxyribonuclease (RefSeq) 0.56 Sama_3047 ADP-ribose diphosphatase (RefSeq) low > 62

Not shown: 17 genomes with orthologs for CSW01_11925 only; 14 genomes with orthologs for CSW01_12330 only