Conservation of cofitness between CSW01_10445 and CSW01_12100 in Vibrio cholerae E7946 ATCC 55056

66 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_10445 succinate dehydrogenase, hydrophobic membrane anchor protein 1.0 CSW01_12100 carbamoyl-phosphate synthase large chain 0.47 19
Klebsiella pneumoniae MKP103 0.60 KDGMDA_16715 succinate dehydrogenase cytochrome b556 subunit 0.87 KDGMDA_12710 carbamoyl-phosphate synthase large subunit low > 94
Klebsiella pneumoniae MRSN742743 0.60 GJGHJB_03517 sdhC succinate dehydrogenase cytochrome b556 subunit 0.87 GJGHJB_04246 carB carbamoyl-phosphate synthase large subunit low > 83
Klebsiella michiganensis M5al 0.60 BWI76_RS08400 succinate dehydrogenase cytochrome b556 small membrane subunit 0.87 BWI76_RS04470 carbamoyl phosphate synthase large subunit
Pectobacterium carotovorum WPP14 0.58 HER17_RS14945 succinate dehydrogenase membrane anchor subunit 0.87 HER17_RS02900 carbamoyl-phosphate synthase large subunit
Enterobacter asburiae PDN3 0.56 EX28DRAFT_2269 succinate dehydrogenase, hydrophobic membrane anchor protein 0.87 EX28DRAFT_3638 carbamoyl-phosphate synthase, large subunit
Dickeya dadantii 3937 0.56 DDA3937_RS06445 succinate dehydrogenase membrane anchor subunit 0.86 DDA3937_RS18305 carbamoyl-phosphate synthase large subunit low > 74
Erwinia tracheiphila SCR3 0.56 LU632_RS16110 sdhD succinate dehydrogenase membrane anchor subunit 0.85 LU632_RS02750 carB carbamoyl-phosphate synthase large subunit 0.82 37
Pantoea sp. MT58 0.55 IAI47_13760 succinate dehydrogenase membrane anchor subunit 0.86 IAI47_16115 carbamoyl-phosphate synthase large subunit low > 76
Dickeya dianthicola ME23 0.55 DZA65_RS06830 succinate dehydrogenase membrane anchor subunit 0.86 DZA65_RS19380 carbamoyl-phosphate synthase large subunit low > 75
Dickeya dianthicola 67-19 0.55 HGI48_RS06485 succinate dehydrogenase membrane anchor subunit 0.86 HGI48_RS18240 carbamoyl-phosphate synthase large subunit low > 71
Pantoea agglomerans CFBP13505 P0401 0.54 PagCFBP13516_RS13870 sdhD succinate dehydrogenase membrane anchor subunit 0.85 PagCFBP13516_RS16425 carB carbamoyl-phosphate synthase large subunit low > 80
Rahnella sp. WP5 0.54 EX31_RS23425 succinate dehydrogenase membrane anchor subunit 0.86 EX31_RS03830 carbamoyl-phosphate synthase large subunit low > 89
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.54 GFF4636 Succinate dehydrogenase hydrophobic membrane anchor protein 0.87 GFF213 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) low > 78
Escherichia coli ECOR38 0.53 HEPCGN_01290 sdhD succinate dehydrogenase membrane anchor subunit 0.87 HEPCGN_08925 carB carbamoyl-phosphate synthase large subunit low > 88
Escherichia coli HS(pFamp)R (ATCC 700891) 0.53 OHPLBJKB_02994 Succinate dehydrogenase hydrophobic membrane anchor subunit 0.87 OHPLBJKB_03624 Carbamoyl-phosphate synthase large chain low > 74
Escherichia coli BL21 0.53 ECD_00682 succinate dehydrogenase, membrane subunit, binds cytochrome b556 0.87 ECD_00037 carbamoyl-phosphate synthase large subunit 0.45 21
Escherichia coli Nissle 1917 0.53 ECOLIN_RS03850 succinate dehydrogenase membrane anchor subunit 0.87 ECOLIN_RS00180 carbamoyl-phosphate synthase large subunit
Escherichia fergusonii Becca 0.53 EFB2_03383 Succinate dehydrogenase hydrophobic membrane anchor subunit 0.87 EFB2_04012 Carbamoyl-phosphate synthase large chain low > 86
Escherichia coli ECRC62 0.53 BNILDI_21325 sdhD succinate dehydrogenase membrane anchor subunit 0.87 BNILDI_08330 carB carbamoyl-phosphate synthase large subunit low > 75
Escherichia coli ECOR27 0.53 NOLOHH_23330 sdhD succinate dehydrogenase membrane anchor subunit 0.87 NOLOHH_03270 carB carbamoyl-phosphate synthase large subunit low > 75
Escherichia coli BW25113 0.53 b0722 sdhD succinate dehydrogenase cytochrome b556 small membrane subunit (NCBI) 0.87 b0033 carB carbamoyl-phosphate synthase large subunit (NCBI) low > 76
Enterobacter sp. TBS_079 0.52 MPMX20_01351 Succinate dehydrogenase hydrophobic membrane anchor subunit 0.87 MPMX20_00740 Carbamoyl-phosphate synthase large chain low > 85
Erwinia tracheiphila HP pepo 2.2 0.52 IJEDHG_02160 sdhD succinate dehydrogenase membrane anchor subunit 0.85 IJEDHG_06145 carB carbamoyl-phosphate synthase large subunit 0.90 4
Erwinia amylovora T8 0.51 OLJFJH_16965 succinate dehydrogenase membrane anchor subunit 0.84 OLJFJH_01395 carbamoyl-phosphate synthase large subunit low > 58
Escherichia coli ECRC100 0.51 OKFHMN_06945 sdhD succinate dehydrogenase membrane anchor subunit 0.87 OKFHMN_10940 carB carbamoyl-phosphate synthase large subunit low > 79
Escherichia coli ECRC99 0.51 KEDOAH_21020 sdhD succinate dehydrogenase membrane anchor subunit 0.87 KEDOAH_17215 carB carbamoyl-phosphate synthase large subunit
Escherichia coli ECRC102 0.51 NIAGMN_04995 sdhD succinate dehydrogenase membrane anchor subunit 0.87 NIAGMN_08790 carB carbamoyl-phosphate synthase large subunit low > 80
Escherichia coli ECRC101 0.51 MCAODC_26165 sdhD succinate dehydrogenase membrane anchor subunit 0.87 MCAODC_01455 carB carbamoyl-phosphate synthase large subunit 0.43 42
Escherichia coli ECRC98 0.51 JDDGAC_10600 sdhD succinate dehydrogenase membrane anchor subunit 0.87 JDDGAC_14535 carB carbamoyl-phosphate synthase large subunit low > 87
Shewanella loihica PV-4 0.51 Shew_1652 putative succinate dehydrogenase, hydrophobic subunit (RefSeq) 0.87 Shew_2838 carB carbamoyl phosphate synthase large subunit (RefSeq)
Serratia liquefaciens MT49 0.50 IAI46_06260 succinate dehydrogenase membrane anchor subunit 0.85 IAI46_03195 carbamoyl-phosphate synthase large subunit low > 87
Shewanella sp. ANA-3 0.47 Shewana3_1707 succinate dehydrogenase subunit D (RefSeq) 0.86 Shewana3_0968 carB carbamoyl phosphate synthase large subunit (RefSeq)
Shewanella oneidensis MR-1 0.47 SO1927.1 hypothetical succinate dehydrogenase, hydrophobic subunit (NCBI ptt file) 0.86 SO1142 carB carbamoyl-phosphate synthase, large subunit (NCBI ptt file)
Alteromonas macleodii MIT1002 0.46 MIT1002_01945 Succinate dehydrogenase hydrophobic membrane anchor subunit 0.81 MIT1002_01467 Carbamoyl-phosphate synthase large chain
Shewanella amazonensis SB2B 0.46 Sama_1424 succinate dehydrogenase, cytochrome b subunit (RefSeq) 0.87 Sama_2503 carB carbamoyl phosphate synthase large subunit (RefSeq)
Marinobacter adhaerens HP15 0.42 HP15_1518 succinate dehydrogenase, hydrophobic membrane anchor 0.75 HP15_3077 carbamoyl-phosphate synthase, large subunit
Kangiella aquimarina DSM 16071 0.38 B158DRAFT_1421 succinate dehydrogenase, hydrophobic membrane anchor protein 0.73 B158DRAFT_0616 carbamoyl-phosphate synthase, large subunit
Pseudomonas sp. RS175 0.34 PFR28_03099 Succinate dehydrogenase hydrophobic membrane anchor subunit 0.76 PFR28_00077 Carbamoyl-phosphate synthase large chain
Pseudomonas fluorescens FW300-N2C3 0.34 AO356_19680 succinate dehydrogenase 0.75 AO356_07480 carbamoyl phosphate synthase large subunit
Pseudomonas aeruginosa PA14 0.34 IKLFDK_07575 succinate dehydrogenase hydrophobic membrane anchor protein 0.76 IKLFDK_29815 carbamoyl-phosphate synthase large subunit
Pseudomonas aeruginosa PUPa3 0.34 NPBIFN_03592 sdhD succinate dehydrogenase hydrophobic membrane anchor protein 0.76 NPBIFN_05061 carB carbamoyl-phosphate synthase large subunit
Pseudomonas aeruginosa MRSN321 0.34 PFGADD_03556 sdhD succinate dehydrogenase hydrophobic membrane anchor protein 0.76 PFGADD_04984 carB carbamoyl-phosphate synthase large subunit
Pseudomonas fluorescens FW300-N2E2 0.34 Pf6N2E2_5852 Succinate dehydrogenase hydrophobic membrane anchor protein 0.75 Pf6N2E2_3364 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
Pseudomonas stutzeri RCH2 0.33 Psest_2497 succinate dehydrogenase, hydrophobic membrane anchor protein 0.75 Psest_0968 carbamoyl-phosphate synthase, large subunit
Pseudomonas fluorescens GW456-L13 0.33 PfGW456L13_4272 Succinate dehydrogenase hydrophobic membrane anchor protein 0.76 PfGW456L13_5099 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
Pseudomonas syringae pv. syringae B728a ΔmexB 0.33 Psyr_2006 succinate dehydrogenase subunit D 0.76 Psyr_4191 carbamoyl-phosphate synthase large subunit
Pseudomonas sp. DMC3 0.33 GFF2517 Succinate dehydrogenase hydrophobic membrane anchor subunit 0.76 GFF4977 Carbamoyl-phosphate synthase large chain
Pseudomonas syringae pv. syringae B728a 0.33 Psyr_2006 succinate dehydrogenase subunit D 0.76 Psyr_4191 carbamoyl-phosphate synthase large subunit
Pseudomonas putida KT2440 0.33 PP_4192 succinate dehydrogenase hydrophobic membrane anchor subunit 0.75 PP_4723 Carbamoyl-phosphate synthase large chain
Pseudomonas sp. SVBP6 0.33 COO64_RS18880 sdhD succinate dehydrogenase, hydrophobic membrane anchor protein 0.75 COO64_RS15240 carB carbamoyl-phosphate synthase large subunit
Pseudomonas sp. BP01 0.33 JOY50_RS19060 sdhD succinate dehydrogenase, hydrophobic membrane anchor protein 0.75 JOY50_RS26765 carB carbamoyl-phosphate synthase large subunit
Pseudomonas fluorescens FW300-N2E3 0.33 AO353_01850 succinate dehydrogenase 0.76 AO353_05630 carbamoyl phosphate synthase large subunit
Pseudomonas sp. S08-1 0.33 OH686_01985 succinate dehydrogenase, hydrophobic membrane anchor protein 0.75 OH686_17080 Carbamoyl-phosphate synthase large chain
Pseudomonas protegens RBAN4 0.33 FABNJH_08900 sdhD succinate dehydrogenase, hydrophobic membrane anchor protein 0.76 FABNJH_04325 carB carbamoyl-phosphate synthase large subunit
Pseudomonas simiae WCS417 0.32 PS417_08880 succinate dehydrogenase 0.76 PS417_24040 carbamoyl phosphate synthase large subunit
Pseudomonas lactucae CFBP13502 0.32 GEMAOFIL_01906 Succinate dehydrogenase hydrophobic membrane anchor subunit 0.76 GEMAOFIL_04958 Carbamoyl-phosphate synthase large chain
Pseudomonas fluorescens FW300-N1B4 0.32 Pf1N1B4_3678 Succinate dehydrogenase hydrophobic membrane anchor protein 0.76 Pf1N1B4_1172 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
Pseudomonas orientalis W4I3 0.32 QF045_RS11575 succinate dehydrogenase, hydrophobic membrane anchor protein 0.76 QF045_RS26295 carbamoyl-phosphate synthase large subunit
Pseudomonas fluorescens SBW25-INTG 0.32 PFLU_RS08940 succinate dehydrogenase, hydrophobic membrane anchor protein 0.76 PFLU_RS25880 carbamoyl-phosphate synthase large subunit
Pseudomonas fluorescens SBW25 0.32 PFLU_RS08940 succinate dehydrogenase, hydrophobic membrane anchor protein 0.76 PFLU_RS25880 carbamoyl-phosphate synthase large subunit
Pseudomonas segetis P6 0.30 ACVTMO_RS11655 sdhD succinate dehydrogenase, hydrophobic membrane anchor protein 0.75 ACVTMO_RS05885 carB carbamoyl-phosphate synthase large subunit
Acinetobacter radioresistens SK82 0.28 MPMX26_00748 Succinate dehydrogenase hydrophobic membrane anchor subunit 0.73 MPMX26_00766 Carbamoyl-phosphate synthase large chain
Ralstonia sp. UNC404CL21Col 0.28 ABZR87_RS14565 succinate dehydrogenase, hydrophobic membrane anchor protein 0.67 ABZR87_RS14140 carbamoyl-phosphate synthase large subunit
Acidovorax sp. GW101-3H11 0.28 Ac3H11_3157 Succinate dehydrogenase hydrophobic membrane anchor protein 0.67 Ac3H11_436 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
Acinetobacter baumannii LAC-4 0.27 RR41_RS04030 succinate dehydrogenase, hydrophobic membrane anchor protein 0.74 RR41_RS04155 carbamoyl-phosphate synthase large subunit
Dechlorosoma suillum PS 0.27 Dsui_2212 succinate dehydrogenase, hydrophobic membrane anchor protein 0.68 Dsui_3064 carbamoyl-phosphate synthase, large subunit

Not shown: 0 genomes with orthologs for CSW01_10445 only; 59 genomes with orthologs for CSW01_12100 only