| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_13280 | | phosphoglycolate phosphatase | 1.0 | CSW01_12035 | | glutamate synthase small subunit | 0.47 | 8 |
| Shewanella oneidensis MR-1 | 0.42 | SO0293 | gph | phosphoglycolate phosphatase (NCBI ptt file) | 0.69 | SO1324 | gltD | glutamate synthase, small subunit (NCBI ptt file) | low | > 76 |
| Klebsiella michiganensis M5al | 0.42 | BWI76_RS26065 | | phosphoglycolate phosphatase | 0.77 | BWI76_RS25320 | | glutamate synthase | low | > 92 |
| Shewanella amazonensis SB2B | 0.42 | Sama_3361 | | phosphoglycolate phosphatase (RefSeq) | 0.68 | Sama_0856 | gltD | glutamate synthase subunit beta (RefSeq) | low | > 62 |
| Shewanella sp. ANA-3 | 0.42 | Shewana3_3887 | | phosphoglycolate phosphatase (RefSeq) | 0.69 | Shewana3_3051 | gltD | glutamate synthase subunit beta (RefSeq) | low | > 73 |
| Enterobacter asburiae PDN3 | 0.41 | EX28DRAFT_4157 | | 2-phosphoglycolate phosphatase, prokaryotic | 0.78 | EX28DRAFT_3276 | | glutamate synthase small subunit family protein, proteobacterial | low | > 76 |
| Pseudomonas stutzeri RCH2 | 0.41 | Psest_3651 | | 2-phosphoglycolate phosphatase, prokaryotic | 0.69 | Psest_3710 | | glutamate synthase small subunit family protein, proteobacterial | low | > 67 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.41 | GFF634 | | Phosphoglycolate phosphatase (EC 3.1.3.18) | 0.78 | GFF2957 | | Glutamate synthase [NADPH] small chain (EC 1.4.1.13) | low | > 78 |
| Shewanella loihica PV-4 | 0.40 | Shew_0220 | | phosphoglycolate phosphatase (RefSeq) | 0.68 | Shew_1031 | gltD | glutamate synthase subunit beta (RefSeq) | low | > 60 |
| Serratia liquefaciens MT49 | 0.40 | IAI46_23680 | | phosphoglycolate phosphatase | 0.78 | IAI46_22350 | | glutamate synthase small subunit | low | > 87 |
| Klebsiella pneumoniae MKP103 | 0.40 | KDGMDA_06890 | | phosphoglycolate phosphatase | 0.77 | KDGMDA_06150 | | Glutamate synthase [NADPH] small chain | low | > 95 |
| Enterobacter sp. TBS_079 | 0.40 | MPMX20_04274 | | Phosphoglycolate phosphatase | 0.78 | MPMX20_04127 | | Glutamate synthase [NADPH] small chain | low | > 85 |
| Pectobacterium carotovorum WPP14 | 0.40 | HER17_RS01800 | | phosphoglycolate phosphatase | 0.78 | HER17_RS19915 | | glutamate synthase small subunit | low | > 75 |
| Dickeya dadantii 3937 | 0.40 | DDA3937_RS19525 | | phosphoglycolate phosphatase | 0.78 | DDA3937_RS01660 | | FAD-dependent oxidoreductase | low | > 74 |
| Dickeya dianthicola 67-19 | 0.40 | HGI48_RS19655 | | phosphoglycolate phosphatase | 0.78 | HGI48_RS01555 | | glutamate synthase small subunit | low | > 71 |
| Escherichia coli BL21 | 0.40 | ECD_03237 | | phosphoglycolate phosphatase | 0.77 | ECD_03078 | | glutamate synthase, 4Fe-4S protein, small subunit | low | > 61 |
| Escherichia coli BW25113 | 0.40 | b3385 | gph | phosphoglycolate phosphatase (NCBI) | 0.77 | b3213 | gltD | glutamate synthase, 4Fe-4S protein, small subunit (NCBI) | low | > 76 |
| Escherichia coli ECRC101 | 0.39 | MCAODC_07665 | gph | phosphoglycolate phosphatase | 0.77 | MCAODC_08400 | gltD | glutamate synthase subunit GltD | low | > 87 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.39 | OHPLBJKB_00318 | | Phosphoglycolate phosphatase | 0.77 | OHPLBJKB_00487 | | Glutamate synthase [NADPH] small chain | low | > 74 |
| Dickeya dianthicola ME23 | 0.39 | DZA65_RS20740 | | phosphoglycolate phosphatase | 0.78 | DZA65_RS01630 | | FAD-dependent oxidoreductase | low | > 75 |
| Escherichia coli ECRC99 | 0.39 | KEDOAH_11005 | gph | phosphoglycolate phosphatase | 0.77 | KEDOAH_10270 | gltD | glutamate synthase subunit GltD | — | — |
| Escherichia coli ECOR27 | 0.39 | NOLOHH_08925 | gph | phosphoglycolate phosphatase | 0.77 | NOLOHH_09680 | gltD | glutamate synthase subunit GltD | low | > 76 |
| Escherichia coli ECRC62 | 0.39 | BNILDI_02595 | gph | phosphoglycolate phosphatase | 0.77 | BNILDI_01855 | gltD | glutamate synthase subunit GltD | low | > 75 |
| Escherichia coli ECRC98 | 0.39 | JDDGAC_20765 | gph | phosphoglycolate phosphatase | 0.77 | JDDGAC_21505 | gltD | glutamate synthase subunit GltD | low | > 87 |
| Escherichia coli ECRC100 | 0.39 | OKFHMN_17135 | gph | phosphoglycolate phosphatase | 0.77 | OKFHMN_17880 | gltD | glutamate synthase subunit GltD | low | > 79 |
| Escherichia coli ECRC102 | 0.39 | NIAGMN_14905 | gph | phosphoglycolate phosphatase | 0.77 | NIAGMN_15640 | gltD | glutamate synthase subunit GltD | low | > 80 |
| Escherichia coli ECOR38 | 0.39 | HEPCGN_15955 | gph | phosphoglycolate phosphatase | 0.77 | HEPCGN_16755 | gltD | glutamate synthase subunit GltD | low | > 88 |
| Escherichia coli Nissle 1917 | 0.39 | ECOLIN_RS19340 | | phosphoglycolate phosphatase | 0.77 | ECOLIN_RS18480 | | glutamate synthase subunit GltD | low | > 55 |
| Erwinia tracheiphila HP pepo 2.2 | 0.39 | IJEDHG_12055 | gph | phosphoglycolate phosphatase | 0.76 | IJEDHG_13700 | | glutamate synthase small subunit | low | > 61 |
| Escherichia fergusonii Becca | 0.39 | EFB2_00443 | | Phosphoglycolate phosphatase | 0.77 | EFB2_00610 | | Glutamate synthase [NADPH] small chain | low | > 86 |
| Erwinia tracheiphila SCR3 | 0.39 | LU632_RS22845 | | phosphoglycolate phosphatase | 0.76 | LU632_RS21320 | | glutamate synthase small subunit | low | > 73 |
| Pseudomonas segetis P6 | 0.37 | MPMX49_00888 | | Phosphoglycolate phosphatase | 0.68 | MPMX49_04230 | | Glutamate synthase [NADPH] small chain | low | > 75 |
| Rahnella sp. WP5 | 0.37 | EX31_RS04700 | | phosphoglycolate phosphatase | 0.78 | EX31_RS12510 | | FAD-dependent oxidoreductase | low | > 89 |
| Alteromonas macleodii MIT1002 | 0.36 | MIT1002_02231 | | Phosphoglycolate phosphatase | 0.75 | MIT1002_03140 | | Glutamate synthase [NADPH] small chain | low | > 70 |
| Acinetobacter baumannii LAC-4 | 0.32 | RR41_RS17615 | | phosphoglycolate phosphatase | 0.69 | RR41_RS01600 | | FAD-dependent oxidoreductase | 0.36 | 35 |
| Marinobacter adhaerens HP15 | 0.29 | HP15_3287 | | phosphoglycolate phosphatase | 0.68 | HP15_483 | | oxidoreductase Fe-S binding subunit | — | — |
| Acinetobacter radioresistens SK82 | 0.28 | MPMX26_00198 | | Phosphoglycolate phosphatase | 0.70 | MPMX26_02807 | | Glutamate synthase [NADPH] small chain | low | > 36 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.27 | Xcc-8004.4534.1 | | Phosphoglycolate phosphatase (EC 3.1.3.18) | 0.58 | Xcc-8004.43.1 | | Glutamate synthase [NADPH] small chain (EC 1.4.1.13) | low | > 74 |
| Azospirillum sp. SherDot2 | 0.25 | MPMX19_04508 | | Phosphoglycolate phosphatase | 0.37 | MPMX19_02658 | | Glutamate synthase [NADPH] small chain | low | > 112 |
| Sphingobium sp. HT1-2 | 0.24 | GFF2443 | | Phosphoglycolate phosphatase (EC 3.1.3.18) | 0.42 | GFF763 | | Glutamate synthase [NADPH] small chain (EC 1.4.1.13) | low | > 95 |
| Rhodospirillum rubrum S1H | 0.24 | Rru_A3031 | | 2-phosphoglycolate phosphatase (NCBI) | 0.39 | Rru_A0018 | | Glutamate synthase, NADH/NADPH, small subunit 2 (NCBI) | — | — |
| Lysobacter sp. OAE881 | 0.23 | ABIE51_RS13485 | | phosphoglycolate phosphatase | 0.57 | ABIE51_RS01315 | | FAD-dependent oxidoreductase | low | > 62 |
| Dinoroseobacter shibae DFL-12 | 0.22 | Dshi_2760 | | phosphoglycolate phosphatase (RefSeq) | 0.41 | Dshi_0001 | | glutamate synthase, small subunit (RefSeq) | low | > 64 |
| Dyella japonica UNC79MFTsu3.2 | 0.20 | ABZR86_RS08775 | | HAD-IA family hydrolase | 0.54 | ABZR86_RS16800 | | FAD-dependent oxidoreductase | low | > 74 |
| Sphingomonas koreensis DSMZ 15582 | 0.20 | Ga0059261_3662 | | haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | 0.41 | Ga0059261_1797 | | glutamate synthase small subunit family protein, proteobacterial | 0.34 | 28 |
| Caulobacter crescentus NA1000 | 0.20 | CCNA_02390 | | phosphoglycolate phosphatase | 0.38 | CCNA_03721 | | glutamate synthase (NADPH) small chain GltD | low | > 66 |
| Caulobacter crescentus NA1000 Δfur | 0.20 | CCNA_02390 | | phosphoglycolate phosphatase | 0.38 | CCNA_03721 | | glutamate synthase (NADPH) small chain GltD | low | > 67 |
| Rhodanobacter denitrificans FW104-10B01 | 0.19 | LRK54_RS02460 | | phosphoglycolate phosphatase | 0.53 | LRK54_RS10965 | | FAD-dependent oxidoreductase | low | > 59 |
| Rhodanobacter denitrificans MT42 | 0.19 | LRK55_RS02215 | | phosphoglycolate phosphatase | 0.53 | LRK55_RS10670 | | FAD-dependent oxidoreductase | low | > 63 |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.19 | DVU0130 | | phosphoglycolate phosphatase, putative (TIGR) | 0.27 | DVU2476 | gltA | glutamate synthase, small subunit (TIGR) | low | > 55 |
| Parabacteroides merdae CL09T00C40 | 0.17 | HMPREF1078_RS13105 | | HAD hydrolase-like protein | 0.28 | HMPREF1078_RS11400 | | NADPH-dependent glutamate synthase | 0.36 | 8 |
| Phaeobacter inhibens DSM 17395 | 0.17 | PGA1_c10250 | | phosphoglycolate phosphatase-like protein | 0.40 | PGA1_c36090 | | glutamate synthase [NADPH] small chain | low | > 62 |
Not shown: 39 genomes with orthologs for CSW01_13280 only; 24 genomes with orthologs for CSW01_12035 only