Conservation of cofitness between CSW01_12320 and CSW01_10675 in Vibrio cholerae E7946 ATCC 55056

58 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_12320 3',5'-cyclic-AMP phosphodiesterase 1.0 CSW01_10675 flagellar protein FliS 0.81 18
Dickeya dadantii 3937 0.54 DDA3937_RS01755 3',5'-cyclic-AMP phosphodiesterase 0.35 DDA3937_RS13350 flagellar export chaperone FliS low > 74
Pantoea sp. MT58 0.53 IAI47_03150 3',5'-cyclic-AMP phosphodiesterase 0.30 IAI47_08135 flagellar export chaperone FliS low > 76
Erwinia amylovora T8 0.53 OLJFJH_07690 3' 5'-cyclic-AMP phosphodiesterase 0.35 OLJFJH_10020 flagellar export chaperone FliS low > 58
Dickeya dianthicola 67-19 0.53 HGI48_RS01650 3',5'-cyclic-AMP phosphodiesterase 0.35 HGI48_RS13395 flagellar export chaperone FliS low > 71
Dickeya dianthicola ME23 0.53 DZA65_RS01725 3',5'-cyclic-AMP phosphodiesterase 0.35 DZA65_RS13880 flagellar export chaperone FliS low > 75
Pantoea agglomerans CFBP13505 P0401 0.53 PagCFBP13505_RS11970 3',5'-cyclic-AMP phosphodiesterase 0.29 PagCFBP13505_RS02025 flagellar export chaperone FliS low > 74
Rahnella sp. WP5 0.53 EX31_RS25975 3',5'-cyclic-AMP phosphodiesterase 0.33 EX31_RS09465 flagellar export chaperone FliS low > 89
Serratia liquefaciens MT49 0.51 IAI46_21930 3',5'-cyclic-AMP phosphodiesterase 0.38 IAI46_15800 flagellar export chaperone FliS low > 86
Erwinia tracheiphila HP pepo 2.2 0.51 IJEDHG_14450 cpdA 3' 5'-cyclic-AMP phosphodiesterase 0.31 IJEDHG_21905 fliS flagellar export chaperone FliS
Erwinia tracheiphila SCR3 0.51 LU632_RS20620 cpdA 3',5'-cyclic-AMP phosphodiesterase 0.31 LU632_RS13845 fliS flagellar export chaperone FliS
Escherichia coli Nissle 1917 0.50 ECOLIN_RS17500 3',5'-cyclic-AMP phosphodiesterase 0.27 ECOLIN_RS10990 flagellar export chaperone FliS
Escherichia fergusonii Becca 0.50 EFB2_00776 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA 0.27 EFB2_02020 Flagellar secretion chaperone FliS 0.50 61
Escherichia coli ECRC98 0.50 JDDGAC_22455 cpdA 3',5'-cyclic-AMP phosphodiesterase 0.27 JDDGAC_00355 fliS flagellar export chaperone FliS low > 87
Escherichia coli ECRC99 0.50 KEDOAH_09325 cpdA 3',5'-cyclic-AMP phosphodiesterase 0.27 KEDOAH_02325 fliS flagellar export chaperone FliS
Escherichia coli ECRC102 0.50 NIAGMN_16585 cpdA 3',5'-cyclic-AMP phosphodiesterase 0.27 NIAGMN_02285 fliS flagellar export chaperone FliS low > 80
Escherichia coli HS(pFamp)R (ATCC 700891) 0.50 OHPLBJKB_00671 '3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA' transl_table=11 0.27 OHPLBJKB_01804 Flagellar secretion chaperone FliS low > 74
Escherichia coli BW25113 0.50 b3032 cpdA cyclic 3',5'-adenosine monophosphate phosphodiesterase (NCBI) 0.27 b1925 fliS flagellar protein FliS (NCBI) low > 76
Escherichia coli ECOR38 0.50 HEPCGN_17695 cpdA 3',5'-cyclic-AMP phosphodiesterase 0.27 HEPCGN_04120 fliS flagellar export chaperone FliS low > 88
Escherichia coli ECOR27 0.50 NOLOHH_10625 cpdA 3',5'-cyclic-AMP phosphodiesterase 0.27 NOLOHH_16385 fliS flagellar export chaperone FliS low > 76
Escherichia coli ECRC101 0.50 MCAODC_09335 cpdA 3',5'-cyclic-AMP phosphodiesterase 0.27 MCAODC_19625 fliS flagellar export chaperone FliS low > 88
Escherichia coli ECRC100 0.50 OKFHMN_18820 cpdA 3',5'-cyclic-AMP phosphodiesterase 0.27 OKFHMN_25765 fliS flagellar export chaperone FliS low > 79
Escherichia coli ECRC62 0.50 BNILDI_00890 cpdA 3',5'-cyclic-AMP phosphodiesterase 0.27 BNILDI_15175 fliS flagellar export chaperone FliS low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.49 GFF3146 '3',5'-cyclic-nucleotide phosphodiesterase (EC 3.1.4.17)' transl_table=11 0.39 GFF4027 Flagellar biosynthesis protein FliS low > 78
Pectobacterium carotovorum WPP14 0.48 HER17_RS19810 3',5'-cyclic-AMP phosphodiesterase 0.35 HER17_RS08300 flagellar export chaperone FliS low > 75
Enterobacter asburiae PDN3 0.48 EX28DRAFT_3070 Predicted phosphohydrolases 0.30 EX28DRAFT_0621 flagellar biosynthetic protein FliS low > 76
Enterobacter sp. TBS_079 0.48 MPMX20_03879 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA 0.37 MPMX20_02856 Flagellar secretion chaperone FliS low > 85
Shewanella sp. ANA-3 0.44 Shewana3_0728 calcineurin phosphoesterase C-terminal domain-containing protein (RefSeq) 0.52 Shewana3_1337 fliS flagellar protein FliS (RefSeq) low > 73
Shewanella oneidensis MR-1 0.44 SO3901 icc lacZ expression regulator (NCBI ptt file) 0.52 SO3233 fliS flagellar protein FliS (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.43 Sama_3045 lacZ expression regulator (RefSeq) 0.54 Sama_2302 fliS flagellar protein FliS (RefSeq) low > 62
Pseudomonas simiae WCS417 0.41 PS417_02380 serine/threonine protein phosphatase 0.38 PS417_19835 flagellar biosynthesis protein FliS
Pseudomonas sp. S08-1 0.41 OH686_15825 3',5'-cyclic-nucleotide phosphodiesterase 0.43 OH686_02865 flagellar protein FliS
Shewanella loihica PV-4 0.41 Shew_0547 calcineurin phosphoesterase C-terminal domain-containing protein (RefSeq) 0.52 Shew_1361 fliS flagellar protein FliS (RefSeq)
Pseudomonas fluorescens FW300-N2E2 0.41 Pf6N2E2_3639 3',5'-cyclic-nucleotide phosphodiesterase (EC 3.1.4.17) 0.39 Pf6N2E2_2599 Flagellar biosynthesis protein FliS
Pseudomonas fluorescens SBW25-INTG 0.41 PFLU_RS02455 3',5'-cyclic-AMP phosphodiesterase 0.38 PFLU_RS21805 flagellar export chaperone FliS low > 109
Pseudomonas fluorescens SBW25 0.41 PFLU_RS02455 3',5'-cyclic-AMP phosphodiesterase 0.38 PFLU_RS21805 flagellar export chaperone FliS low > 109
Pseudomonas fluorescens FW300-N2C3 0.41 AO356_08785 serine/threonine protein phosphatase 0.37 AO356_03865 flagellar export chaperone FliS
Pseudomonas lactucae CFBP13502 0.40 GEMAOFIL_00713 '3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA' transl_table=11 0.38 GEMAOFIL_04165 Flagellar secretion chaperone FliS low > 93
Pseudomonas fluorescens FW300-N2E3 0.40 AO353_13035 serine/threonine protein phosphatase 0.40 AO353_18650 flagellar export chaperone FliS
Pseudomonas syringae pv. syringae B728a 0.39 Psyr_0549 Metallophosphoesterase 0.35 Psyr_3463 Flagellar protein FliS low > 86
Pseudomonas segetis P6 0.39 MPMX49_04179 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA 0.40 MPMX49_03152 Flagellar secretion chaperone FliS
Pseudomonas syringae pv. syringae B728a ΔmexB 0.39 Psyr_0549 Metallophosphoesterase 0.35 Psyr_3463 Flagellar protein FliS low > 86
Pseudomonas fluorescens FW300-N1B4 0.39 Pf1N1B4_1442 3',5'-cyclic-nucleotide phosphodiesterase (EC 3.1.4.17) 0.35 Pf1N1B4_3597 Flagellar biosynthesis protein FliS
Pseudomonas sp. RS175 0.39 PFR28_05096 '3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA' transl_table=11 0.40 PFR28_00826 Flagellar secretion chaperone FliS
Pseudomonas aeruginosa PA14 0.38 IKLFDK_28695 3' 5'-cyclic-AMP phosphodiesterase 0.38 IKLFDK_05035 flagellar protein FliS
Pseudomonas sp. DMC3 0.38 GFF3188 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA 0.37 GFF2443 Flagellar secretion chaperone FliS
Pseudomonas sp. BP01 0.38 JOY50_RS17115 cpdA 3',5'-cyclic-AMP phosphodiesterase 0.36 JOY50_RS00715 fliS flagellar export chaperone FliS
Pseudomonas stutzeri RCH2 0.38 Psest_0481 Predicted phosphohydrolases 0.40 Psest_2504 flagellar biosynthetic protein FliS
Pseudomonas putida KT2440 0.37 PP_4917 3',5'-cyclic-nucleotide phosphodiesterase 0.40 PP_4375 flagellar chaperone, inhibits premature FliC assembly low > 96
Pseudomonas sp. SVBP6 0.36 COO64_RS17780 cpdA 3',5'-cyclic-AMP phosphodiesterase 0.37 COO64_RS21310 fliS flagellar export chaperone FliS
Marinobacter adhaerens HP15 0.34 HP15_456 phosphohydrolase 0.39 HP15_2368 flagellar protein FliS
Alteromonas macleodii MIT1002 0.21 MIT1002_00673 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA 0.32 MIT1002_01057 Flagellar protein FliS low > 70
Ralstonia solanacearum IBSBF1503 0.21 RALBFv3_RS21090 phosphohydrolase 0.30 RALBFv3_RS21620 flagellar export chaperone FliS low > 76
Ralstonia solanacearum UW163 0.21 UW163_RS22230 phosphohydrolase 0.30 UW163_RS17570 flagellar export chaperone FliS
Ralstonia solanacearum GMI1000 0.20 RS_RS19730 phosphohydrolase 0.29 RS_RS19005 flagellar export chaperone FliS low > 80
Cupriavidus basilensis FW507-4G11 0.18 RR42_RS27795 metallophosphatase 0.31 RR42_RS23640 flagellar biosynthesis protein FliS low > 128
Paraburkholderia sabiae LMG 24235 0.15 QEN71_RS05540 phosphodiesterase 0.33 QEN71_RS28785 flagellar export chaperone FliS low > 153
Variovorax sp. SCN45 0.15 GFF6061 3',5'-cyclic-nucleotide phosphodiesterase (EC 3.1.4.17) 0.26 GFF5755 Flagellar biosynthesis protein FliS low > 127
Paraburkholderia graminis OAS925 0.15 ABIE53_002840 Icc protein 0.33 ABIE53_000072 flagellar protein FliS low > 113

Not shown: 10 genomes with orthologs for CSW01_12320 only; 15 genomes with orthologs for CSW01_10675 only