| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
| Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_12320 | | 3',5'-cyclic-AMP phosphodiesterase | 1.0 | CSW01_10675 | | flagellar protein FliS | 0.81 | 18 |
| Dickeya dadantii 3937 | 0.54 | DDA3937_RS01755 | | 3',5'-cyclic-AMP phosphodiesterase | 0.35 | DDA3937_RS13350 | | flagellar export chaperone FliS | low | > 74 |
| Pantoea sp. MT58 | 0.53 | IAI47_03150 | | 3',5'-cyclic-AMP phosphodiesterase | 0.30 | IAI47_08135 | | flagellar export chaperone FliS | low | > 76 |
| Erwinia amylovora T8 | 0.53 | OLJFJH_07690 | | 3' 5'-cyclic-AMP phosphodiesterase | 0.35 | OLJFJH_10020 | | flagellar export chaperone FliS | low | > 58 |
| Dickeya dianthicola 67-19 | 0.53 | HGI48_RS01650 | | 3',5'-cyclic-AMP phosphodiesterase | 0.35 | HGI48_RS13395 | | flagellar export chaperone FliS | low | > 71 |
| Dickeya dianthicola ME23 | 0.53 | DZA65_RS01725 | | 3',5'-cyclic-AMP phosphodiesterase | 0.35 | DZA65_RS13880 | | flagellar export chaperone FliS | low | > 75 |
| Pantoea agglomerans CFBP13505 P0401 | 0.53 | PagCFBP13505_RS11970 | | 3',5'-cyclic-AMP phosphodiesterase | 0.29 | PagCFBP13505_RS02025 | | flagellar export chaperone FliS | low | > 74 |
| Rahnella sp. WP5 | 0.53 | EX31_RS25975 | | 3',5'-cyclic-AMP phosphodiesterase | 0.33 | EX31_RS09465 | | flagellar export chaperone FliS | low | > 89 |
| Serratia liquefaciens MT49 | 0.51 | IAI46_21930 | | 3',5'-cyclic-AMP phosphodiesterase | 0.38 | IAI46_15800 | | flagellar export chaperone FliS | low | > 86 |
| Erwinia tracheiphila HP pepo 2.2 | 0.51 | IJEDHG_14450 | cpdA | 3' 5'-cyclic-AMP phosphodiesterase | 0.31 | IJEDHG_21905 | fliS | flagellar export chaperone FliS | — | — |
| Erwinia tracheiphila SCR3 | 0.51 | LU632_RS20620 | cpdA | 3',5'-cyclic-AMP phosphodiesterase | 0.31 | LU632_RS13845 | fliS | flagellar export chaperone FliS | — | — |
| Escherichia coli Nissle 1917 | 0.50 | ECOLIN_RS17500 | | 3',5'-cyclic-AMP phosphodiesterase | 0.27 | ECOLIN_RS10990 | | flagellar export chaperone FliS | — | — |
| Escherichia fergusonii Becca | 0.50 | EFB2_00776 | | 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA | 0.27 | EFB2_02020 | | Flagellar secretion chaperone FliS | 0.50 | 61 |
| Escherichia coli ECRC98 | 0.50 | JDDGAC_22455 | cpdA | 3',5'-cyclic-AMP phosphodiesterase | 0.27 | JDDGAC_00355 | fliS | flagellar export chaperone FliS | low | > 87 |
| Escherichia coli ECRC99 | 0.50 | KEDOAH_09325 | cpdA | 3',5'-cyclic-AMP phosphodiesterase | 0.27 | KEDOAH_02325 | fliS | flagellar export chaperone FliS | — | — |
| Escherichia coli ECRC102 | 0.50 | NIAGMN_16585 | cpdA | 3',5'-cyclic-AMP phosphodiesterase | 0.27 | NIAGMN_02285 | fliS | flagellar export chaperone FliS | low | > 80 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.50 | OHPLBJKB_00671 | | '3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA' transl_table=11 | 0.27 | OHPLBJKB_01804 | | Flagellar secretion chaperone FliS | low | > 74 |
| Escherichia coli BW25113 | 0.50 | b3032 | cpdA | cyclic 3',5'-adenosine monophosphate phosphodiesterase (NCBI) | 0.27 | b1925 | fliS | flagellar protein FliS (NCBI) | low | > 76 |
| Escherichia coli ECOR38 | 0.50 | HEPCGN_17695 | cpdA | 3',5'-cyclic-AMP phosphodiesterase | 0.27 | HEPCGN_04120 | fliS | flagellar export chaperone FliS | low | > 88 |
| Escherichia coli ECOR27 | 0.50 | NOLOHH_10625 | cpdA | 3',5'-cyclic-AMP phosphodiesterase | 0.27 | NOLOHH_16385 | fliS | flagellar export chaperone FliS | low | > 76 |
| Escherichia coli ECRC101 | 0.50 | MCAODC_09335 | cpdA | 3',5'-cyclic-AMP phosphodiesterase | 0.27 | MCAODC_19625 | fliS | flagellar export chaperone FliS | low | > 88 |
| Escherichia coli ECRC100 | 0.50 | OKFHMN_18820 | cpdA | 3',5'-cyclic-AMP phosphodiesterase | 0.27 | OKFHMN_25765 | fliS | flagellar export chaperone FliS | low | > 79 |
| Escherichia coli ECRC62 | 0.50 | BNILDI_00890 | cpdA | 3',5'-cyclic-AMP phosphodiesterase | 0.27 | BNILDI_15175 | fliS | flagellar export chaperone FliS | low | > 75 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.49 | GFF3146 | | '3',5'-cyclic-nucleotide phosphodiesterase (EC 3.1.4.17)' transl_table=11 | 0.39 | GFF4027 | | Flagellar biosynthesis protein FliS | low | > 78 |
| Pectobacterium carotovorum WPP14 | 0.48 | HER17_RS19810 | | 3',5'-cyclic-AMP phosphodiesterase | 0.35 | HER17_RS08300 | | flagellar export chaperone FliS | low | > 75 |
| Enterobacter asburiae PDN3 | 0.48 | EX28DRAFT_3070 | | Predicted phosphohydrolases | 0.30 | EX28DRAFT_0621 | | flagellar biosynthetic protein FliS | low | > 76 |
| Enterobacter sp. TBS_079 | 0.48 | MPMX20_03879 | | 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA | 0.37 | MPMX20_02856 | | Flagellar secretion chaperone FliS | low | > 85 |
| Shewanella sp. ANA-3 | 0.44 | Shewana3_0728 | | calcineurin phosphoesterase C-terminal domain-containing protein (RefSeq) | 0.52 | Shewana3_1337 | fliS | flagellar protein FliS (RefSeq) | low | > 73 |
| Shewanella oneidensis MR-1 | 0.44 | SO3901 | icc | lacZ expression regulator (NCBI ptt file) | 0.52 | SO3233 | fliS | flagellar protein FliS (NCBI ptt file) | low | > 76 |
| Shewanella amazonensis SB2B | 0.43 | Sama_3045 | | lacZ expression regulator (RefSeq) | 0.54 | Sama_2302 | fliS | flagellar protein FliS (RefSeq) | low | > 62 |
| Pseudomonas simiae WCS417 | 0.41 | PS417_02380 | | serine/threonine protein phosphatase | 0.38 | PS417_19835 | | flagellar biosynthesis protein FliS | — | — |
| Pseudomonas sp. S08-1 | 0.41 | OH686_15825 | | 3',5'-cyclic-nucleotide phosphodiesterase | 0.43 | OH686_02865 | | flagellar protein FliS | — | — |
| Shewanella loihica PV-4 | 0.41 | Shew_0547 | | calcineurin phosphoesterase C-terminal domain-containing protein (RefSeq) | 0.52 | Shew_1361 | fliS | flagellar protein FliS (RefSeq) | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.41 | Pf6N2E2_3639 | | 3',5'-cyclic-nucleotide phosphodiesterase (EC 3.1.4.17) | 0.39 | Pf6N2E2_2599 | | Flagellar biosynthesis protein FliS | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.41 | PFLU_RS02455 | | 3',5'-cyclic-AMP phosphodiesterase | 0.38 | PFLU_RS21805 | | flagellar export chaperone FliS | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.41 | PFLU_RS02455 | | 3',5'-cyclic-AMP phosphodiesterase | 0.38 | PFLU_RS21805 | | flagellar export chaperone FliS | low | > 109 |
| Pseudomonas fluorescens FW300-N2C3 | 0.41 | AO356_08785 | | serine/threonine protein phosphatase | 0.37 | AO356_03865 | | flagellar export chaperone FliS | — | — |
| Pseudomonas lactucae CFBP13502 | 0.40 | GEMAOFIL_00713 | | '3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA' transl_table=11 | 0.38 | GEMAOFIL_04165 | | Flagellar secretion chaperone FliS | low | > 93 |
| Pseudomonas fluorescens FW300-N2E3 | 0.40 | AO353_13035 | | serine/threonine protein phosphatase | 0.40 | AO353_18650 | | flagellar export chaperone FliS | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.39 | Psyr_0549 | | Metallophosphoesterase | 0.35 | Psyr_3463 | | Flagellar protein FliS | low | > 86 |
| Pseudomonas segetis P6 | 0.39 | MPMX49_04179 | | 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA | 0.40 | MPMX49_03152 | | Flagellar secretion chaperone FliS | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.39 | Psyr_0549 | | Metallophosphoesterase | 0.35 | Psyr_3463 | | Flagellar protein FliS | low | > 86 |
| Pseudomonas fluorescens FW300-N1B4 | 0.39 | Pf1N1B4_1442 | | 3',5'-cyclic-nucleotide phosphodiesterase (EC 3.1.4.17) | 0.35 | Pf1N1B4_3597 | | Flagellar biosynthesis protein FliS | — | — |
| Pseudomonas sp. RS175 | 0.39 | PFR28_05096 | | '3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA' transl_table=11 | 0.40 | PFR28_00826 | | Flagellar secretion chaperone FliS | — | — |
| Pseudomonas aeruginosa PA14 | 0.38 | IKLFDK_28695 | | 3' 5'-cyclic-AMP phosphodiesterase | 0.38 | IKLFDK_05035 | | flagellar protein FliS | — | — |
| Pseudomonas sp. DMC3 | 0.38 | GFF3188 | | 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA | 0.37 | GFF2443 | | Flagellar secretion chaperone FliS | — | — |
| Pseudomonas sp. BP01 | 0.38 | JOY50_RS17115 | cpdA | 3',5'-cyclic-AMP phosphodiesterase | 0.36 | JOY50_RS00715 | fliS | flagellar export chaperone FliS | — | — |
| Pseudomonas stutzeri RCH2 | 0.38 | Psest_0481 | | Predicted phosphohydrolases | 0.40 | Psest_2504 | | flagellar biosynthetic protein FliS | — | — |
| Pseudomonas putida KT2440 | 0.37 | PP_4917 | | 3',5'-cyclic-nucleotide phosphodiesterase | 0.40 | PP_4375 | | flagellar chaperone, inhibits premature FliC assembly | low | > 96 |
| Pseudomonas sp. SVBP6 | 0.36 | COO64_RS17780 | cpdA | 3',5'-cyclic-AMP phosphodiesterase | 0.37 | COO64_RS21310 | fliS | flagellar export chaperone FliS | — | — |
| Marinobacter adhaerens HP15 | 0.34 | HP15_456 | | phosphohydrolase | 0.39 | HP15_2368 | | flagellar protein FliS | — | — |
| Alteromonas macleodii MIT1002 | 0.21 | MIT1002_00673 | | 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA | 0.32 | MIT1002_01057 | | Flagellar protein FliS | low | > 70 |
| Ralstonia solanacearum IBSBF1503 | 0.21 | RALBFv3_RS21090 | | phosphohydrolase | 0.30 | RALBFv3_RS21620 | | flagellar export chaperone FliS | low | > 76 |
| Ralstonia solanacearum UW163 | 0.21 | UW163_RS22230 | | phosphohydrolase | 0.30 | UW163_RS17570 | | flagellar export chaperone FliS | — | — |
| Ralstonia solanacearum GMI1000 | 0.20 | RS_RS19730 | | phosphohydrolase | 0.29 | RS_RS19005 | | flagellar export chaperone FliS | low | > 80 |
| Cupriavidus basilensis FW507-4G11 | 0.18 | RR42_RS27795 | | metallophosphatase | 0.31 | RR42_RS23640 | | flagellar biosynthesis protein FliS | low | > 128 |
| Paraburkholderia sabiae LMG 24235 | 0.15 | QEN71_RS05540 | | phosphodiesterase | 0.33 | QEN71_RS28785 | | flagellar export chaperone FliS | low | > 153 |
| Variovorax sp. SCN45 | 0.15 | GFF6061 | | 3',5'-cyclic-nucleotide phosphodiesterase (EC 3.1.4.17) | 0.26 | GFF5755 | | Flagellar biosynthesis protein FliS | low | > 127 |
| Paraburkholderia graminis OAS925 | 0.15 | ABIE53_002840 | | Icc protein | 0.33 | ABIE53_000072 | | flagellar protein FliS | low | > 113 |
Not shown: 10 genomes with orthologs for CSW01_12320 only; 15 genomes with orthologs for CSW01_10675 only