Conservation of cofitness between CSW01_14565 and CSW01_09940 in Vibrio cholerae E7946 ATCC 55056

63 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_14565 type VI secretion system baseplate subunit TssF 1.0 CSW01_09940 formyltetrahydrofolate deformylase 0.45 13
Dickeya dadantii 3937 0.53 DDA3937_RS07030 type VI secretion system baseplate subunit TssF 0.73 DDA3937_RS10325 formyltetrahydrofolate deformylase low > 74
Dickeya dianthicola ME23 0.53 DZA65_RS08555 type VI secretion system baseplate subunit TssF 0.73 DZA65_RS10810 formyltetrahydrofolate deformylase low > 75
Dickeya dianthicola 67-19 0.53 HGI48_RS07960 type VI secretion system baseplate subunit TssF 0.73 HGI48_RS10335 formyltetrahydrofolate deformylase low > 71
Pectobacterium carotovorum WPP14 0.52 HER17_RS04855 type VI secretion system baseplate subunit TssF 0.75 HER17_RS11065 formyltetrahydrofolate deformylase low > 75
Pseudomonas putida KT2440 0.48 PP_2621 conserved protein of unknown function 0.36 PP_1943 formyltetrahydrofolate deformylase low > 96
Erwinia tracheiphila SCR3 0.46 LU632_RS17675 tssF type VI secretion system baseplate subunit TssF 0.72 LU632_RS12940 purU formyltetrahydrofolate deformylase low > 73
Escherichia coli ECOR27 0.42 NOLOHH_02230 tssF Type VI secretion system protein TssF 0.74 NOLOHH_20480 purU formyltetrahydrofolate deformylase low > 76
Escherichia coli ECRC102 0.42 NIAGMN_07720 tssF Type VI secretion system protein TssF 0.74 NIAGMN_27665 purU formyltetrahydrofolate deformylase low > 80
Escherichia coli ECRC101 0.42 MCAODC_00390 tssF Type VI secretion system protein TssF 0.74 MCAODC_21690 purU formyltetrahydrofolate deformylase low > 87
Escherichia coli ECRC98 0.42 JDDGAC_13470 tssF Type VI secretion system protein TssF 0.74 JDDGAC_06005 purU formyltetrahydrofolate deformylase low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.42 OHPLBJKB_03430 hypothetical protein 0.74 OHPLBJKB_02453 Formyltetrahydrofolate deformylase 0.31 21
Escherichia coli ECRC99 0.42 KEDOAH_18280 tssF Type VI secretion system protein TssF 0.74 KEDOAH_25565 purU formyltetrahydrofolate deformylase — —
Escherichia coli ECRC100 0.41 OKFHMN_09870 tssF Type VI secretion system protein TssF 0.74 OKFHMN_28570 purU formyltetrahydrofolate deformylase low > 79
Pseudomonas segetis P6 0.39 MPMX49_00135 hypothetical protein 0.37 MPMX49_03632 Formyltetrahydrofolate deformylase low > 75
Pseudomonas fluorescens FW300-N1B4 0.37 Pf1N1B4_2086 Protein ImpG/VasA 0.39 Pf1N1B4_665 Formyltetrahydrofolate deformylase (EC 3.5.1.10) — —
Pseudomonas sp. DMC3 0.37 GFF454 hypothetical protein 0.38 GFF5213 Formyltetrahydrofolate deformylase — —
Pseudomonas sp. S08-1 0.36 OH686_12825 T6SS component TssF (ImpG/VasA) 0.37 OH686_18295 formyltetrahydrofolate deformylase low > 80
Pseudomonas fluorescens FW300-N2E3 0.36 AO353_09425 type VI secretion protein 0.39 AO353_03710 formyltetrahydrofolate deformylase low > 101
Pseudomonas aeruginosa MRSN321 0.36 DY961_RS19965 tssF;go_function=molecular_function|0003674||IEA;go_process=protein type VI secretion system baseplate subunit TssF 0.39 DY961_RS24925 purU;go_function=formyltetrahydrofolate formyltetrahydrofolate deformylase low > 100
Pseudomonas aeruginosa PA14 0.36 IKLFDK_07995 Protein ImpG/VasA 0.39 IKLFDK_02535 formyltetrahydrofolate deformylase — —
Pseudomonas aeruginosa PUPa3 0.36 DQ20_RS54060 tssF;go_function=molecular_function|0003674||IEA;go_process=protein type VI secretion system baseplate subunit TssF 0.39 DQ20_RS57375 purU;go_function=formyltetrahydrofolate formyltetrahydrofolate deformylase low > 101
Pseudomonas simiae WCS417 0.36 PS417_15310 type VI secretion protein 0.39 PS417_22565 formyltetrahydrofolate deformylase low > 88
Pseudomonas stutzeri RCH2 0.36 Psest_0127 type VI secretion protein, VC_A0110 family 0.38 Psest_3178 formyltetrahydrofolate deformylase low > 67
Pseudomonas orientalis W4I3 0.36 QF045_RS14215 type VI secretion system baseplate subunit TssF 0.38 QF045_RS24740 formyltetrahydrofolate deformylase — —
Pseudomonas fluorescens FW300-N2C3 0.36 AO356_12145 type VI secretion protein 0.39 AO356_17895 formyltetrahydrofolate deformylase — —
Pseudomonas fluorescens FW300-N2E2 0.35 Pf6N2E2_4301 Protein ImpG/VasA 0.39 Pf6N2E2_5508 Formyltetrahydrofolate deformylase (EC 3.5.1.10) low > 103
Pseudomonas syringae pv. syringae B728a 0.27 Psyr_4956 protein of unknown function DUF879 0.39 Psyr_4018 Formyltetrahydrofolate deformylase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.27 Psyr_4956 protein of unknown function DUF879 0.39 Psyr_4018 Formyltetrahydrofolate deformylase low > 86
Variovorax sp. OAS795 0.25 ABID97_RS12940 type VI secretion system baseplate subunit TssF 0.34 ABID97_RS00100 formyltetrahydrofolate deformylase — —
Cupriavidus basilensis FW507-4G11 0.25 RR42_RS22110 type VI secretion protein ImpG 0.34 RR42_RS13800 formyltetrahydrofolate deformylase low > 128
Pseudomonas sp. BP01 0.25 JOY50_RS19900 tssF type VI secretion system baseplate subunit TssF 0.37 JOY50_RS14345 purU formyltetrahydrofolate deformylase — —
Klebsiella pneumoniae MKP103 0.24 KDGMDA_24740 type VI secretion system baseplate subunit TssF 0.73 KDGMDA_24520 formyltetrahydrofolate deformylase low > 95
Escherichia coli Nissle 1917 0.23 ECOLIN_RS15765 type VI secretion system baseplate subunit TssF 0.74 ECOLIN_RS07460 formyltetrahydrofolate deformylase low > 55
Enterobacter sp. TBS_079 0.23 MPMX20_01644 hypothetical protein 0.72 MPMX20_02596 Formyltetrahydrofolate deformylase low > 85
Rahnella sp. WP5 0.23 EX31_RS01975 type VI secretion system baseplate subunit TssF 0.75 EX31_RS10115 formyltetrahydrofolate deformylase low > 89
Enterobacter asburiae PDN3 0.22 EX28DRAFT_0259 type VI secretion protein, VC_A0110 family 0.72 EX28DRAFT_0858 formyltetrahydrofolate deformylase low > 76
Erwinia amylovora T8 0.22 OLJFJH_03085 type VI secretion system baseplate subunit TssF 0.74 OLJFJH_13275 formyltetrahydrofolate deformylase low > 58
Pantoea sp. MT58 0.22 IAI47_17375 type VI secretion system baseplate subunit TssF 0.74 IAI47_09010 formyltetrahydrofolate deformylase low > 76
Paraburkholderia graminis OAS925 0.21 ABIE53_003935 type VI secretion system protein ImpG 0.37 ABIE53_000728 formyltetrahydrofolate deformylase low > 113
Azospirillum sp. SherDot2 0.21 MPMX19_03419 hypothetical protein 0.37 MPMX19_04425 Formyltetrahydrofolate deformylase — —
Azospirillum brasilense Sp245 0.20 AZOBR_RS21230 hypothetical protein 0.36 AZOBR_RS21685 formyltetrahydrofolate deformylase — —
Ralstonia sp. UNC404CL21Col 0.20 ABZR87_RS20220 type VI secretion system baseplate subunit TssF 0.35 ABZR87_RS14235 formyltetrahydrofolate deformylase low > 80
Herbaspirillum seropedicae SmR1 0.20 HSERO_RS20160 type VI secretion protein 0.35 HSERO_RS07970 formyltetrahydrofolate deformylase low > 78
Ralstonia solanacearum UW163 0.20 UW163_RS19140 type VI secretion system baseplate subunit TssF 0.35 UW163_RS11420 formyltetrahydrofolate deformylase — —
Ralstonia solanacearum IBSBF1503 0.20 RALBFv3_RS20035 type VI secretion system baseplate subunit TssF 0.35 RALBFv3_RS02305 formyltetrahydrofolate deformylase low > 76
Variovorax sp. SCN45 0.20 GFF6367 T6SS component TssF (ImpG/VasA) 0.35 GFF3790 Formyltetrahydrofolate deformylase (EC 3.5.1.10) low > 127
Ralstonia solanacearum PSI07 0.20 RPSI07_RS02940 type VI secretion system baseplate subunit TssF 0.35 RPSI07_RS15065 formyltetrahydrofolate deformylase low > 81
Paraburkholderia bryophila 376MFSha3.1 0.20 H281DRAFT_05367 type VI secretion system protein ImpG 0.38 H281DRAFT_01917 formyltetrahydrofolate deformylase — —
Pseudomonas sp. RS175 0.19 PFR28_02388 hypothetical protein 0.39 PFR28_03439 Formyltetrahydrofolate deformylase — —
Ralstonia solanacearum GMI1000 0.19 RS_RS20690 type VI secretion system baseplate subunit TssF 0.35 RS_RS09460 formyltetrahydrofolate deformylase low > 80
Paraburkholderia sabiae LMG 24235 0.19 QEN71_RS31715 type VI secretion system baseplate subunit TssF 0.37 QEN71_RS01805 formyltetrahydrofolate deformylase low > 153
Burkholderia phytofirmans PsJN 0.19 BPHYT_RS04600 type VI secretion protein 0.38 BPHYT_RS02955 formyltetrahydrofolate deformylase low > 109
Agrobacterium fabrum C58 0.19 Atu4337 hypothetical protein 0.36 Atu2464 formyltetrahydrofolate deformylase low > 89
Pseudomonas fluorescens SBW25-INTG 0.19 PFLU_RS29650 type VI secretion system baseplate subunit TssF 0.39 PFLU_RS24200 formyltetrahydrofolate deformylase — —
Pseudomonas lactucae CFBP13502 0.19 GEMAOFIL_00062 hypothetical protein 0.39 GEMAOFIL_04667 Formyltetrahydrofolate deformylase low > 96
Pantoea agglomerans CFBP13505 P0401 0.19 PagCFBP13505_RS19815 type VI secretion system baseplate subunit TssF 0.74 PagCFBP13505_RS02850 formyltetrahydrofolate deformylase 0.59 58
Pseudomonas fluorescens SBW25 0.19 PFLU_RS29650 type VI secretion system baseplate subunit TssF 0.39 PFLU_RS24200 formyltetrahydrofolate deformylase — —
Pseudomonas sp. SVBP6 0.19 COO64_RS00470 tssF type VI secretion system baseplate subunit TssF 0.37 COO64_RS12215 purU formyltetrahydrofolate deformylase — —
Erwinia tracheiphila HP pepo 2.2 0.18 IJEDHG_04995 tssF type VI secretion system baseplate subunit TssF 0.72 IJEDHG_22670 purU formyltetrahydrofolate deformylase low > 61
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.18 GFF4050 Protein ImpG/VasA 0.73 GFF2756 Formyltetrahydrofolate deformylase (EC 3.5.1.10) low > 78
Serratia liquefaciens MT49 0.16 IAI46_05550 type VI secretion system baseplate subunit TssF 0.74 IAI46_14265 formyltetrahydrofolate deformylase low > 87
Bosea sp. OAE506 0.16 ABIE41_RS14385 type VI secretion system baseplate subunit TssF 0.35 ABIE41_RS02615 formyltetrahydrofolate deformylase low > 77
Acinetobacter radioresistens SK82 0.16 MPMX26_00966 hypothetical protein 0.36 MPMX26_00378 Formyltetrahydrofolate deformylase — —

Not shown: 2 genomes with orthologs for CSW01_14565 only; 45 genomes with orthologs for CSW01_09940 only