Conservation of cofitness between CSW01_08010 and CSW01_09250 in Vibrio cholerae E7946 ATCC 55056

54 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_08010 MFS transporter 1.0 CSW01_09250 crossover junction endodeoxyribonuclease RuvC 0.53 6
Shewanella sp. ANA-3 0.46 Shewana3_0064 major facilitator transporter (RefSeq) 0.67 Shewana3_1955 ruvC Holliday junction resolvase (RefSeq) — —
Pseudomonas fluorescens SBW25 0.27 PFLU_RS07440 MFS transporter 0.57 PFLU_RS24095 crossover junction endodeoxyribonuclease RuvC low > 109
Pseudomonas aeruginosa MRSN321 0.27 DY961_RS27500 MDR family MFS transporter 0.55 DY961_RS07605 ruvC;go_function=crossover crossover junction endodeoxyribonuclease RuvC low > 100
Pseudomonas aeruginosa PUPa3 0.27 DQ20_RS32050 MDR family MFS transporter 0.55 DQ20_RS45185 ruvC;go_function=crossover crossover junction endodeoxyribonuclease RuvC — —
Pseudomonas fluorescens SBW25-INTG 0.27 PFLU_RS07440 MFS transporter 0.57 PFLU_RS24095 crossover junction endodeoxyribonuclease RuvC low > 109
Pseudomonas aeruginosa PA14 0.27 IKLFDK_24350 MFS transporter 0.55 IKLFDK_04365 crossover junction endodeoxyribonuclease RuvC — —
Pseudomonas lactucae CFBP13502 0.27 GEMAOFIL_01605 Multidrug resistance protein 3 0.56 GEMAOFIL_04643 Crossover junction endodeoxyribonuclease RuvC low > 96
Pseudomonas putida KT2440 0.27 PP_1388 Drug resistance transporter, EmrB/QacA family 0.50 PP_1215 Crossover junction endodeoxyribonuclease RuvC low > 96
Pseudomonas simiae WCS417 0.27 PS417_07335 DSBA oxidoreductase 0.56 PS417_22455 crossover junction endodeoxyribonuclease RuvC — —
Pseudomonas orientalis W4I3 0.27 QF045_RS09995 MDR family MFS transporter 0.56 QF045_RS24620 crossover junction endodeoxyribonuclease RuvC low > 93
Pseudomonas sp. BP01 0.26 JOY50_RS14460 MDR family MFS transporter 0.50 JOY50_RS01825 ruvC crossover junction endodeoxyribonuclease RuvC low > 84
Pseudomonas fluorescens FW300-N2E3 0.26 AO353_03900 disulfide bond formation protein DsbA 0.57 AO353_03590 crossover junction endodeoxyribonuclease RuvC low > 101
Pseudomonas sp. RS175 0.26 PFR28_00544 Putative multidrug resistance protein MdtD 0.57 PFR28_03414 Crossover junction endodeoxyribonuclease RuvC low > 88
Pseudomonas fluorescens GW456-L13 0.26 PfGW456L13_1786 drug resistance transporter, EmrB/QacA family 0.57 PfGW456L13_1851 Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) low > 87
Pseudomonas sp. SVBP6 0.26 COO64_RS26260 MDR family MFS transporter 0.57 COO64_RS20090 ruvC crossover junction endodeoxyribonuclease RuvC low > 93
Pseudomonas fluorescens FW300-N2C3 0.25 AO356_05300 disulfide bond formation protein DsbA 0.57 AO356_18015 crossover junction endodeoxyribonuclease RuvC — —
Pseudomonas fluorescens FW300-N1B4 0.25 Pf1N1B4_704 drug resistance transporter, EmrB/QacA family 0.57 Pf1N1B4_639 Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) — —
Serratia liquefaciens MT49 0.25 IAI46_12720 MFS transporter 0.62 IAI46_14630 crossover junction endodeoxyribonuclease RuvC — —
Pseudomonas fluorescens FW300-N2E2 0.25 Pf6N2E2_2915 drug resistance transporter, EmrB/QacA family 0.57 Pf6N2E2_5535 Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) — —
Pseudomonas sp. DMC3 0.25 GFF5056 Multidrug resistance protein 3 0.57 GFF5186 Crossover junction endodeoxyribonuclease RuvC low > 89
Cupriavidus basilensis FW507-4G11 0.23 RR42_RS00325 MFS transporter 0.50 RR42_RS02715 Holliday junction DNA helicase — —
Bosea sp. OAE506 0.23 ABIE41_RS01910 MDR family MFS transporter 0.35 ABIE41_RS09470 crossover junction endodeoxyribonuclease RuvC low > 77
Enterobacter sp. TBS_079 0.23 MPMX20_00062 Multidrug resistance protein 3 0.66 MPMX20_02768 Crossover junction endodeoxyribonuclease RuvC low > 85
Klebsiella pneumoniae MKP103 0.23 KDGMDA_08315 EmrB/QacA family drug resistance transporter 0.64 KDGMDA_25420 crossover junction endodeoxyribonuclease RuvC low > 95
Burkholderia phytofirmans PsJN 0.23 BPHYT_RS24280 DSBA oxidoreductase 0.49 BPHYT_RS16605 crossover junction endodeoxyribonuclease RuvC — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.23 Psyr_4004 Drug resistance transporter EmrB/QacA subfamily 0.56 Psyr_1408 Holliday junction endonuclease RuvC low > 86
Pseudomonas syringae pv. syringae B728a 0.23 Psyr_4004 Drug resistance transporter EmrB/QacA subfamily 0.56 Psyr_1408 Holliday junction endonuclease RuvC low > 86
Ralstonia sp. UNC404CL21Col 0.23 ABZR87_RS18795 MDR family MFS transporter 0.51 ABZR87_RS07635 crossover junction endodeoxyribonuclease RuvC low > 80
Rahnella sp. WP5 0.23 EX31_RS05285 MFS transporter 0.66 EX31_RS11680 crossover junction endodeoxyribonuclease RuvC — —
Paraburkholderia sabiae LMG 24235 0.23 QEN71_RS07930 MDR family MFS transporter 0.47 QEN71_RS26785 crossover junction endodeoxyribonuclease RuvC — —
Klebsiella michiganensis M5al 0.23 BWI76_RS27675 EmrB/QacA family drug resistance transporter 0.64 BWI76_RS18155 crossover junction endodeoxyribonuclease RuvC — —
Ralstonia solanacearum PSI07 0.22 RPSI07_RS05785 MFS transporter 0.50 RPSI07_RS21535 crossover junction endodeoxyribonuclease RuvC — —
Paraburkholderia bryophila 376MFSha3.1 0.22 H281DRAFT_05342 drug resistance transporter, EmrB/QacA subfamily 0.49 H281DRAFT_04253 Holliday junction endonuclease RuvC — —
Rhizobium sp. OAE497 0.22 ABIE40_RS18620 MDR family MFS transporter 0.32 ABIE40_RS15730 crossover junction endodeoxyribonuclease RuvC low > 107
Variovorax sp. SCN45 0.22 GFF136 Uncharacterized MFS-type transporter 0.44 GFF4462 Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) low > 127
Ralstonia solanacearum GMI1000 0.22 RS_RS23200 MFS transporter 0.50 RS_RS02500 crossover junction endodeoxyribonuclease RuvC — —
Xanthobacter sp. DMC5 0.21 GFF935 Multidrug resistance protein 3 0.31 GFF80 Crossover junction endodeoxyribonuclease RuvC — —
Agrobacterium fabrum C58 0.21 Atu0838 MFS permease 0.33 Atu3724 Holliday junction resolvase — —
Herbaspirillum seropedicae SmR1 0.19 HSERO_RS09275 DSBA oxidoreductase 0.47 HSERO_RS02080 Holliday junction resolvase — —
Erwinia amylovora T8 0.18 OLJFJH_14265 MFS transporter 0.66 OLJFJH_12850 crossover junction endodeoxyribonuclease RuvC low > 58
Pantoea sp. MT58 0.18 IAI47_09785 MFS transporter 0.66 IAI47_08440 crossover junction endodeoxyribonuclease RuvC low > 76
Pectobacterium carotovorum WPP14 0.18 HER17_RS10725 MFS transporter 0.66 HER17_RS11850 crossover junction endodeoxyribonuclease RuvC 0.40 59
Pantoea agglomerans CFBP13505 P0401 0.18 PagCFBP13505_RS06370 MFS transporter 0.66 PagCFBP13505_RS02320 crossover junction endodeoxyribonuclease RuvC — —
Pseudomonas stutzeri RCH2 0.14 Psest_0847 drug resistance transporter, EmrB/QacA subfamily 0.57 Psest_1495 crossover junction endodeoxyribonuclease RuvC — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.13 GFF189 MFS permease 0.42 GFF572 Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) — —
Erwinia tracheiphila HP pepo 2.2 0.13 IJEDHG_22350 Multidrug MFS transporter 0.63 IJEDHG_22130 ruvC crossover junction endodeoxyribonuclease RuvC — —
Erwinia tracheiphila SCR3 0.13 LU632_RS13235 MFS transporter 0.63 LU632_RS13420 ruvC crossover junction endodeoxyribonuclease RuvC — —
Dyella japonica UNC79MFTsu3.2 0.13 ABZR86_RS01865 MFS transporter 0.39 ABZR86_RS10845 crossover junction endodeoxyribonuclease RuvC — —
Enterobacter asburiae PDN3 0.13 EX28DRAFT_0728 Major Facilitator Superfamily 0.66 EX28DRAFT_0694 Holliday junction endonuclease RuvC (EC 3.1.22.4) — —
Phocaeicola vulgatus CL09T03C04 0.12 HMPREF1058_RS11365 MFS transporter 0.31 HMPREF1058_RS01800 crossover junction endodeoxyribonuclease RuvC low > 67
Brevundimonas sp. GW460-12-10-14-LB2 0.12 A4249_RS05645 MFS transporter 0.27 A4249_RS15855 crossover junction endodeoxyribonuclease RuvC — —
Phocaeicola dorei CL03T12C01 0.12 ABI39_RS05560 MFS transporter 0.31 ABI39_RS15265 crossover junction endodeoxyribonuclease RuvC low > 72
Rhodanobacter sp000427505 FW510-R12 0.12 LRK53_RS11570 MFS transporter 0.34 LRK53_RS05115 crossover junction endodeoxyribonuclease RuvC — —
Rhodanobacter sp. FW510-T8 0.12 OKGIIK_07515 MFS transporter 0.37 OKGIIK_01835 ruvC crossover junction endodeoxyribonuclease RuvC — —

Not shown: 2 genomes with orthologs for CSW01_08010 only; 59 genomes with orthologs for CSW01_09250 only