| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_07065 | | multidrug resistance protein | 1.0 | CSW01_08445 | | ABC transporter substrate-binding protein | 0.57 | 20 |
| Herbaspirillum seropedicae SmR1 | 0.42 | HSERO_RS16345 | | multidrug transporter | 0.13 | HSERO_RS09195 | | glutathione ABC transporter substrate-binding protein GsiB | low | > 78 |
| Enterobacter asburiae PDN3 | 0.36 | EX28DRAFT_2613 | | efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family | 0.41 | EX28DRAFT_0974 | | ABC-type oligopeptide transport system, periplasmic component | low | > 76 |
| Rhodospirillum rubrum S1H | 0.27 | Rru_A0860 | | RND efflux system, outer membrane lipoprotein, NodT (NCBI) | 0.30 | Rru_A2356 | | extracellular solute-binding protein, family 5 (NCBI) | low | > 58 |
| Paraburkholderia sabiae LMG 24235 | 0.26 | QEN71_RS39370 | | efflux transporter outer membrane subunit | 0.31 | QEN71_RS28705 | | ABC transporter substrate-binding protein | low | > 153 |
| Pseudomonas fluorescens FW300-N2E2 | 0.25 | Pf6N2E2_147 | | Outer membrane component of tripartite multidrug resistance system | 0.31 | Pf6N2E2_3310 | | Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2) | low | > 103 |
| Pseudomonas fluorescens FW300-N2C3 | 0.25 | AO356_01035 | | multidrug RND transporter | 0.31 | AO356_07255 | | peptide ABC transporter substrate-binding protein | low | > 104 |
| Pseudomonas simiae WCS417 | 0.25 | PS417_16920 | | multidrug RND transporter | 0.30 | PS417_04075 | | peptide ABC transporter substrate-binding protein | low | > 88 |
| Pseudomonas fluorescens SBW25-INTG | 0.25 | PFLU_RS18905 | | efflux transporter outer membrane subunit | 0.30 | PFLU_RS04120 | | ABC transporter substrate-binding protein | low | > 109 |
| Pseudomonas sp. RS175 | 0.25 | PFR28_02749 | | Toluene efflux pump outer membrane protein TtgF | 0.32 | PFR28_00128 | | Periplasmic dipeptide transport protein | low | > 88 |
| Pseudomonas fluorescens SBW25 | 0.25 | PFLU_RS18905 | | efflux transporter outer membrane subunit | 0.30 | PFLU_RS04120 | | ABC transporter substrate-binding protein | low | > 109 |
| Variovorax sp. SCN45 | 0.25 | GFF4769 | | Outer membrane factor (OMF) lipoprotein associated wth EmrAB-OMF efflux system | 0.30 | GFF7288 | | Dipeptide ABC transporter, substrate-binding protein DppA (TC 3.A.1.5.2) | low | > 127 |
| Pseudomonas fluorescens FW300-N2E3 | 0.25 | AO353_27850 | | multidrug RND transporter | 0.30 | AO353_05370 | | peptide ABC transporter substrate-binding protein | low | > 101 |
| Pseudomonas fluorescens FW300-N1B4 | 0.25 | Pf1N1B4_4000 | | Outer membrane component of tripartite multidrug resistance system | 0.32 | Pf1N1B4_1121 | | Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2) | 0.37 | 2 |
| Pseudomonas sp. SVBP6 | 0.25 | COO64_RS08910 | | efflux transporter outer membrane subunit | 0.31 | COO64_RS04105 | | ABC transporter substrate-binding protein | low | > 93 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.25 | H281DRAFT_01551 | | efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family | 0.31 | H281DRAFT_05802 | | dipeptide transport system substrate-binding protein | low | > 103 |
| Pseudomonas fluorescens GW456-L13 | 0.24 | PfGW456L13_2604 | | Outer membrane component of tripartite multidrug resistance system | 0.31 | PfGW456L13_5054 | | Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2) | low | > 87 |
| Pseudomonas aeruginosa PA14 | 0.24 | IKLFDK_20075 | | RND transporter | 0.31 | IKLFDK_01580 | | Di/tripeptide-binding protein 3 | low | > 101 |
| Paraburkholderia graminis OAS925 | 0.24 | ABIE53_001875 | | NodT family efflux transporter outer membrane factor (OMF) lipoprotein | 0.30 | ABIE53_000595 | | dipeptide transport system substrate-binding protein | low | > 113 |
| Pseudomonas sp. DMC3 | 0.24 | GFF1486 | | Toluene efflux pump outer membrane protein TtgI | 0.32 | GFF5023 | | Periplasmic dipeptide transport protein | low | > 89 |
| Variovorax sp. OAS795 | 0.23 | ABID97_RS20400 | | efflux transporter outer membrane subunit | 0.30 | ABID97_RS04470 | | ABC transporter substrate-binding protein | low | > 91 |
| Castellaniella sp019104865 MT123 | 0.23 | ABCV34_RS05940 | | efflux transporter outer membrane subunit | 0.13 | ABCV34_RS13515 | | glutathione ABC transporter substrate-binding protein GsiB | low | > 48 |
| Pseudomonas putida KT2440 | 0.21 | PP_1263 | | putative Fusaric acid resistance protein | 0.30 | PP_0885 | | dipeptide ABC transporter - periplasmic binding protein | low | > 96 |
| Pseudomonas sp. BP01 | 0.20 | JOY50_RS15460 | | efflux transporter outer membrane subunit | 0.30 | JOY50_RS10980 | | ABC transporter substrate-binding protein | low | > 84 |
| Pseudomonas syringae pv. syringae B728a | 0.20 | Psyr_1045 | | RND efflux system, outer membrane lipoprotein, NodT | 0.32 | Psyr_4238 | | extracellular solute-binding protein, family 5 | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.20 | Psyr_1045 | | RND efflux system, outer membrane lipoprotein, NodT | 0.32 | Psyr_4238 | | extracellular solute-binding protein, family 5 | low | > 86 |
| Rahnella sp. WP5 | 0.18 | EX31_RS13650 | | efflux transporter outer membrane subunit | 0.41 | EX31_RS15700 | | peptide ABC transporter substrate-binding protein SapA | — | — |
| Serratia liquefaciens MT49 | 0.18 | IAI46_19995 | | efflux transporter outer membrane subunit | 0.40 | IAI46_13525 | | peptide ABC transporter substrate-binding protein SapA | — | — |
| Klebsiella michiganensis M5al | 0.18 | BWI76_RS23620 | | multidrug resistance transporter | 0.40 | BWI76_RS12420 | | peptide ABC transporter substrate-binding protein SapA | low | > 92 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.17 | GFF3807 | | RND efflux system, outer membrane lipoprotein, NodT family | 0.38 | GFF2688 | | Peptide transport periplasmic protein SapA | low | > 78 |
| Enterobacter sp. TBS_079 | 0.17 | MPMX20_03107 | | Antibiotic efflux pump outer membrane protein ArpC | 0.40 | MPMX20_02474 | | Peptide transport periplasmic protein SapA | low | > 85 |
| Pseudomonas sp. S08-1 | 0.16 | OH686_00935 | | Outer membrane factor (OMF) lipoprotein associated wth MdtABC efflux system | 0.31 | OH686_08695 | | Dipeptide ABC transporter, substrate-binding protein DppA | low | > 80 |
| Escherichia coli ECRC100 | 0.16 | OKFHMN_12765 | mdtP | multidrug efflux transporter outer membrane subunit MdtP | 0.39 | OKFHMN_02460 | sapA | peptide ABC transporter substrate-binding protein SapA | — | — |
| Escherichia coli ECRC101 | 0.16 | MCAODC_03275 | mdtP | multidrug efflux transporter outer membrane subunit MdtP | 0.39 | MCAODC_15810 | sapA | peptide ABC transporter substrate-binding protein SapA | — | — |
| Escherichia coli ECRC98 | 0.16 | JDDGAC_16400 | mdtP | multidrug efflux transporter outer membrane subunit MdtP | 0.39 | JDDGAC_05005 | sapA | peptide ABC transporter substrate-binding protein SapA | — | — |
| Escherichia coli ECRC102 | 0.16 | NIAGMN_10610 | mdtP | multidrug efflux transporter outer membrane subunit MdtP | 0.39 | NIAGMN_26630 | sapA | peptide ABC transporter substrate-binding protein SapA | — | — |
| Escherichia coli ECOR27 | 0.16 | NOLOHH_05020 | mdtP | multidrug efflux transporter outer membrane subunit MdtP | 0.39 | NOLOHH_20145 | sapA | peptide ABC transporter substrate-binding protein SapA | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.16 | OHPLBJKB_03959 | | Cation efflux system protein CusC | 0.39 | OHPLBJKB_02388 | | Peptide transport periplasmic protein SapA | low | > 73 |
| Escherichia coli ECRC62 | 0.16 | BNILDI_06505 | mdtP | multidrug efflux transporter outer membrane subunit MdtP | 0.39 | BNILDI_18295 | sapA | peptide ABC transporter substrate-binding protein SapA | low | > 75 |
| Escherichia coli ECOR38 | 0.15 | HEPCGN_11395 | mdtP | multidrug efflux transporter outer membrane subunit MdtP | 0.39 | HEPCGN_25740 | sapA | peptide ABC transporter substrate-binding protein SapA | — | — |
| Escherichia coli Nissle 1917 | 0.15 | ECOLIN_RS23635 | | multidrug efflux transporter outer membrane subunit MdtP | 0.39 | ECOLIN_RS07825 | | ABC transporter substrate-binding protein SapA | — | — |
| Escherichia fergusonii Becca | 0.15 | EFB2_04503 | | Cation efflux system protein CusC | 0.39 | EFB2_02626 | | Peptide transport periplasmic protein SapA | low | > 86 |
| Escherichia coli BL21 | 0.15 | ECD_03952 | | outer membrane factor of efflux pump | 0.39 | ECD_01271 | | antimicrobial peptide transport ABC transporter periplasmic binding protein | — | — |
| Escherichia coli BW25113 | 0.15 | b4080 | yjcP | predicted outer membrane factor of efflux pump (NCBI) | 0.39 | b1294 | sapA | predicted antimicrobial peptide transporter subunit (NCBI) | low | > 76 |
| Escherichia coli ECRC99 | 0.15 | KEDOAH_15385 | mdtP | multidrug efflux transporter outer membrane subunit MdtP | 0.39 | KEDOAH_26315 | sapA | peptide ABC transporter substrate-binding protein SapA | — | — |
| Erwinia tracheiphila SCR3 | 0.15 | LU632_RS09495 | | efflux transporter outer membrane subunit | 0.38 | LU632_RS11570 | sapA | peptide ABC transporter substrate-binding protein SapA | low | > 74 |
| Rhodopseudomonas palustris CGA009 | 0.14 | TX73_013300 | | efflux transporter outer membrane subunit | 0.11 | TX73_012035 | | ABC transporter substrate-binding protein | low | > 86 |
| Pantoea sp. MT58 | 0.14 | IAI47_12395 | | efflux transporter outer membrane subunit | 0.40 | IAI47_09380 | | peptide ABC transporter substrate-binding protein SapA | low | > 76 |
| Dickeya dadantii 3937 | 0.14 | DDA3937_RS14115 | | efflux transporter outer membrane subunit | 0.39 | DDA3937_RS12440 | | peptide ABC transporter substrate-binding protein SapA | low | > 74 |
| Kangiella aquimarina DSM 16071 | 0.14 | B158DRAFT_0732 | | efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family | 0.32 | B158DRAFT_1047 | | ABC-type dipeptide transport system, periplasmic component | low | > 40 |
| Dickeya dianthicola 67-19 | 0.14 | HGI48_RS14115 | | efflux transporter outer membrane subunit | 0.39 | HGI48_RS12505 | | peptide ABC transporter substrate-binding protein SapA | low | > 71 |
| Erwinia amylovora T8 | 0.14 | OLJFJH_16410 | | RND transporter | 0.39 | OLJFJH_13660 | | peptide ABC transporter substrate-binding protein SapA | low | > 58 |
| Shewanella sp. ANA-3 | 0.13 | Shewana3_1994 | | outer membrane efflux protein (RefSeq) | 0.37 | Shewana3_2650 | | acetate kinase (RefSeq) | — | — |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.13 | CA265_RS05050 | | RND transporter | 0.12 | CA265_RS01030 | | ABC transporter substrate-binding protein | low | > 88 |
| Agrobacterium fabrum C58 | 0.13 | Atu2552 | | nodulation protein T precursor | 0.30 | Atu4113 | | dipeptide ABC transporter substrate-binding protein | — | — |
| Rhizobium sp. OAE497 | 0.12 | ABIE40_RS15365 | | efflux transporter outer membrane subunit | 0.32 | ABIE40_RS22525 | | ABC transporter substrate-binding protein | — | — |
| Dickeya dianthicola ME23 | 0.12 | DZA65_RS03600 | | efflux transporter outer membrane subunit | 0.39 | DZA65_RS12955 | | peptide ABC transporter substrate-binding protein SapA | low | > 75 |
| Pectobacterium carotovorum WPP14 | 0.11 | HER17_RS07525 | | efflux transporter outer membrane subunit | 0.40 | HER17_RS09495 | | peptide ABC transporter substrate-binding protein SapA | low | > 75 |
| Shewanella oneidensis MR-1 | 0.11 | SO0822 | | outer membrane efflux family protein (NCBI ptt file) | 0.36 | SO1805 | sapA | peptide ABC transporter, periplasmic peptide-binding protein (NCBI ptt file) | low | > 76 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.11 | ABZR88_RS12550 | | efflux transporter outer membrane subunit | 0.12 | ABZR88_RS16670 | | ABC transporter substrate-binding protein | low | > 71 |
| Alteromonas macleodii MIT1002 | 0.11 | MIT1002_00868 | | Toluene efflux pump outer membrane protein TtgF precursor | 0.35 | MIT1002_01141 | | Dipeptide-binding protein | low | > 70 |
| Bosea sp. OAE506 | 0.10 | ABIE41_RS01590 | | efflux transporter outer membrane subunit | 0.12 | ABIE41_RS23730 | | ABC transporter substrate-binding protein | low | > 77 |
| Fusobacterium nucleatum SB010 | 0.09 | HUW76_07980 | | TolC family protein | 0.17 | HUW76_05125 | | ABC transporter substrate-binding protein | low | > 35 |
Not shown: 35 genomes with orthologs for CSW01_07065 only; 7 genomes with orthologs for CSW01_08445 only