Conservation of cofitness between CSW01_06740 and CSW01_07835 in Vibrio cholerae E7946 ATCC 55056

49 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_06740 2-methylcitrate synthase 1.0 CSW01_07835 catalase-peroxidase 0.76 2
Marinobacter adhaerens HP15 0.74 HP15_1931 2-methylcitrate synthase/citrate synthase II 0.76 HP15_1397 peroxidase/catalase HPI low > 73
Alteromonas macleodii MIT1002 0.70 MIT1002_03130 2-methylcitrate synthase 0.51 MIT1002_03345 Catalase-peroxidase 2 precursor low > 70
Pseudomonas sp. BP01 0.70 JOY50_RS25745 prpC 2-methylcitrate synthase 0.58 JOY50_RS07970 katG catalase/peroxidase HPI low > 84
Pseudomonas putida KT2440 0.70 PP_2335 methylcitrate synthase 0.59 PP_3668 Catalase-peroxidase low > 96
Shewanella sp. ANA-3 0.70 Shewana3_3826 methylcitrate synthase (RefSeq) 0.77 Shewana3_0306 catalase/peroxidase HPI (RefSeq) low > 73
Pseudomonas sp. SVBP6 0.69 COO64_RS09905 prpC 2-methylcitrate synthase 0.60 COO64_RS08175 katG catalase/peroxidase HPI low > 91
Shewanella amazonensis SB2B 0.69 Sama_3295 methylcitrate synthase (RefSeq) 0.82 Sama_3270 catalase (RefSeq) low > 62
Shewanella oneidensis MR-1 0.69 SO0344 prpC 2-methylcitrate synthase (EC 2.3.3.5) (from data) 0.78 SO4405 katG-2 catalase/peroxidase HPI (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.69 Shew_1821 2-methylcitrate synthase/citrate synthase II (RefSeq) 0.51 Shew_0709 catalase/peroxidase HPI (RefSeq) low > 60
Pseudomonas syringae pv. syringae B728a 0.69 Psyr_2086 2-methylcitrate synthase 0.62 Psyr_4208 heme catalase/peroxidase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.69 Psyr_2086 2-methylcitrate synthase 0.62 Psyr_4208 heme catalase/peroxidase low > 86
Pseudomonas fluorescens FW300-N2E2 0.68 Pf6N2E2_6062 2-methylcitrate synthase (EC 2.3.3.5) (from data) 0.60 Pf6N2E2_3430 Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7) low > 103
Pseudomonas fluorescens FW300-N2C3 0.68 AO356_20870 2-methylcitrate synthase 0.60 AO356_07735 hydroperoxidase low > 104
Pseudomonas protegens RBAN4 0.68 FABNJH_09630 prpC 2-methylcitrate synthase 0.59 FABNJH_14040 katG catalase/peroxidase HPI — —
Pseudomonas fluorescens FW300-N2E3 0.68 AO353_00895 2-methylcitrate synthase 0.60 AO353_23210 hydroperoxidase low > 101
Pseudomonas sp. DMC3 0.68 GFF5231 2-methylcitrate synthase 0.61 GFF1038 Catalase-peroxidase low > 89
Pseudomonas stutzeri RCH2 0.68 Psest_2320 2-methylcitrate synthase/citrate synthase II 0.55 Psest_2741 catalase/peroxidase HPI low > 67
Pseudomonas fluorescens FW300-N1B4 0.67 Pf1N1B4_3820 2-methylcitrate synthase (EC 2.3.3.5) 0.58 Pf1N1B4_4230 Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7) low > 87
Methylophilus sp. DMC18 0.56 GFF468 2-methylcitrate synthase 0.79 GFF2031 Catalase-peroxidase — —
Kangiella aquimarina DSM 16071 0.53 B158DRAFT_1344 2-methylcitrate synthase (EC 2.3.3.5) 0.81 B158DRAFT_0317 catalase/peroxidase HPI low > 40
Lysobacter sp. OAE881 0.53 ABIE51_RS06020 2-methylcitrate synthase 0.60 ABIE51_RS07780 catalase/peroxidase HPI low > 62
Burkholderia phytofirmans PsJN 0.53 BPHYT_RS33965 methylcitrate synthase 0.60 BPHYT_RS10310 catalase-peroxidase low > 109
Ralstonia solanacearum PSI07 0.53 RPSI07_RS00395 2-methylcitrate synthase 0.62 RPSI07_RS20110 catalase/peroxidase HPI low > 81
Herbaspirillum seropedicae SmR1 0.53 HSERO_RS15655 methylcitrate synthase 0.58 HSERO_RS06245 catalase-peroxidase low > 78
Variovorax sp. SCN45 0.52 GFF271 2-methylcitrate synthase (EC 2.3.3.5) 0.60 GFF4692 Catalase-peroxidase KatG (EC 1.11.1.21) low > 127
Paraburkholderia sabiae LMG 24235 0.52 QEN71_RS31065 2-methylcitrate synthase 0.59 QEN71_RS29740 catalase/peroxidase HPI low > 153
Dyella japonica UNC79MFTsu3.2 0.52 ABZR86_RS08475 2-methylcitrate synthase 0.63 ABZR86_RS00615 catalase/peroxidase HPI low > 74
Ralstonia sp. UNC404CL21Col 0.52 ABZR87_RS16740 2-methylcitrate synthase 0.57 ABZR87_RS01240 catalase/peroxidase HPI low > 80
Acinetobacter baumannii LAC-4 0.52 RR41_RS18480 2-methylcitrate synthase 0.56 RR41_RS16940 catalase/peroxidase HPI low > 55
Cupriavidus basilensis FW507-4G11 0.52 RR42_RS11265 methylcitrate synthase 0.58 RR42_RS26270 hydroperoxidase — —
Acidovorax sp. GW101-3H11 0.51 Ac3H11_2322 2-methylcitrate synthase (EC 2.3.3.5) 0.57 Ac3H11_135 Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7) low > 79
Xanthomonas campestris pv. campestris strain 8004 0.51 Xcc-8004.3980.1 2-methylcitrate synthase (EC 2.3.3.5) 0.59 Xcc-8004.3762.1 Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7) low > 74
Escherichia coli ECRC102 0.51 NIAGMN_06950 prpC 2-methylcitrate synthase 0.57 NIAGMN_11415 katG catalase/peroxidase HPI low > 80
Escherichia coli ECRC62 0.51 BNILDI_23185 prpC 2-methylcitrate synthase 0.57 BNILDI_05730 katG catalase/peroxidase HPI low > 75
Escherichia coli ECRC100 0.51 OKFHMN_08895 prpC 2-methylcitrate synthase 0.57 OKFHMN_13660 katG catalase/peroxidase HPI low > 79
Escherichia coli ECRC98 0.51 JDDGAC_12550 prpC 2-methylcitrate synthase 0.57 JDDGAC_17285 katG catalase/peroxidase HPI low > 87
Pseudomonas sp. S08-1 0.51 OH686_01685 2-methylcitrate synthase 0.58 OH686_15490 catalase/peroxidase HPI low > 80
Escherichia coli ECRC101 0.51 MCAODC_28125 prpC 2-methylcitrate synthase 0.57 MCAODC_04160 katG catalase/peroxidase HPI low > 87
Escherichia coli ECRC99 0.51 KEDOAH_19070 prpC 2-methylcitrate synthase 0.57 KEDOAH_14500 katG catalase/peroxidase HPI — —
Escherichia coli ECOR27 0.51 NOLOHH_01770 prpC 2-methylcitrate synthase 0.57 NOLOHH_05805 katG catalase/peroxidase HPI low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.51 OHPLBJKB_03338 2-methylcitrate synthase 0.57 OHPLBJKB_04108 Catalase-peroxidase low > 74
Escherichia coli BW25113 0.51 b0333 prpC 2-methylcitrate synthase (NCBI) 0.57 b3942 katG catalase/hydroperoxidase HPI(I) (NCBI) low > 76
Escherichia coli BL21 0.51 ECD_00287 2-methylcitrate synthase 0.57 ECD_03828 catalase-peroxidase HPI, heme b-containing low > 61
Escherichia coli ECOR38 0.51 HEPCGN_07480 prpC 2-methylcitrate synthase 0.57 HEPCGN_12305 katG catalase/peroxidase HPI low > 88
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.51 GFF4264 2-methylcitrate synthase (EC 2.3.3.5) 0.57 GFF2330 Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7) low > 78
Escherichia coli Nissle 1917 0.50 ECOLIN_RS02155 2-methylcitrate synthase 0.57 ECOLIN_RS22765 catalase/peroxidase HPI low > 55
Escherichia fergusonii Becca 0.50 EFB2_03705 2-methylcitrate synthase 0.57 EFB2_04671 Catalase-peroxidase low > 86
Mycobacterium tuberculosis H37Rv 0.31 Rv1131 Probable methylcitrate synthase PrpC 0.52 Rv1908c Catalase-peroxidase-peroxynitritase T KatG low > 58
Phaeobacter inhibens DSM 17395 0.27 PGA1_c28860 citrate synthase GltA 0.72 PGA1_78p00050 peroxidase/catalase HPI low > 62

Not shown: 22 genomes with orthologs for CSW01_06740 only; 39 genomes with orthologs for CSW01_07835 only