Conservation of cofitness between CSW01_01280 and CSW01_07835 in Vibrio cholerae E7946 ATCC 55056

59 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_01280 GDP-mannose 4,6-dehydratase 1.0 CSW01_07835 catalase-peroxidase 0.98 20
Dickeya dianthicola 67-19 0.87 HGI48_RS18595 GDP-mannose 4,6-dehydratase 0.62 HGI48_RS08090 catalase/peroxidase HPI low > 71
Dickeya dadantii 3937 0.87 DDA3937_RS18665 GDP-mannose 4,6-dehydratase 0.62 DDA3937_RS07265 catalase/peroxidase HPI low > 74
Dickeya dianthicola ME23 0.87 DZA65_RS19730 GDP-mannose 4,6-dehydratase 0.62 DZA65_RS08685 catalase/peroxidase HPI low > 75
Pseudomonas stutzeri RCH2 0.83 Psest_1818 GDP-mannose 4,6-dehydratase 0.55 Psest_2741 catalase/peroxidase HPI low > 67
Escherichia coli ECRC100 0.83 OKFHMN_24440 GDP-mannose 4,6-dehydratase 0.57 OKFHMN_13660 katG catalase/peroxidase HPI
Escherichia coli ECRC102 0.83 NIAGMN_22385 GDP-mannose 4,6-dehydratase 0.57 NIAGMN_11415 katG catalase/peroxidase HPI
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.83 GFF3875 GDP-mannose 4,6-dehydratase (EC 4.2.1.47) 0.57 GFF2330 Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7) low > 78
Escherichia coli ECRC101 0.83 MCAODC_20500 GDP-mannose 4,6-dehydratase 0.57 MCAODC_04160 katG catalase/peroxidase HPI
Escherichia coli ECRC99 0.83 KEDOAH_03710 GDP-mannose 4,6-dehydratase 0.57 KEDOAH_14500 katG catalase/peroxidase HPI
Escherichia coli ECRC98 0.83 JDDGAC_28550 GDP-mannose 4,6-dehydratase 0.57 JDDGAC_17285 katG catalase/peroxidase HPI
Escherichia coli ECOR27 0.83 NOLOHH_15675 GDP-mannose 4,6-dehydratase 0.57 NOLOHH_05805 katG catalase/peroxidase HPI low > 75
Escherichia coli BL21 0.83 ECD_01959 GDP-D-mannose dehydratase, NAD(P)-binding 0.57 ECD_03828 catalase-peroxidase HPI, heme b-containing low > 61
Enterobacter asburiae PDN3 0.83 EX28DRAFT_0502 GDP-mannose 4,6-dehydratase 0.57 EX28DRAFT_4414 catalase/peroxidase HPI low > 76
Escherichia coli ECOR38 0.83 HEPCGN_03045 GDP-mannose 4,6-dehydratase 0.57 HEPCGN_12305 katG catalase/peroxidase HPI low > 87
Escherichia fergusonii Becca 0.83 EFB2_01801 GDP-mannose 4,6-dehydratase 0.57 EFB2_04671 Catalase-peroxidase low > 86
Escherichia coli ECRC62 0.83 BNILDI_14585 GDP-mannose 4,6-dehydratase 0.57 BNILDI_05730 katG catalase/peroxidase HPI low > 75
Escherichia coli BW25113 0.83 b2053 gmd GDP-D-mannose dehydratase, NAD(P)-binding (NCBI) 0.57 b3942 katG catalase/hydroperoxidase HPI(I) (NCBI) low > 76
Escherichia coli Nissle 1917 0.82 ECOLIN_RS12095 GDP-mannose 4,6-dehydratase 0.57 ECOLIN_RS22765 catalase/peroxidase HPI low > 55
Enterobacter sp. TBS_079 0.82 MPMX20_03035 GDP-mannose 4,6-dehydratase 0.56 MPMX20_04528 Catalase-peroxidase low > 85
Phaeobacter inhibens DSM 17395 0.81 PGA1_65p00310 GDP-mannose 4,6-dehydratase Gmd 0.72 PGA1_78p00050 peroxidase/catalase HPI low > 62
Hydrogenophaga sp. GW460-11-11-14-LB1 0.78 GFF2554 GDP-mannose 4,6-dehydratase (EC 4.2.1.47) 0.58 GFF637 Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7) low > 90
Pectobacterium carotovorum WPP14 0.78 HER17_RS14540 GDP-mannose 4,6-dehydratase 0.80 HER17_RS09165 catalase/peroxidase HPI low > 75
Cupriavidus basilensis FW507-4G11 0.76 RR42_RS33235 GDP-mannose 4,6-dehydratase 0.58 RR42_RS26270 hydroperoxidase low > 128
Variovorax sp. SCN45 0.74 GFF61 GDP-mannose 4,6-dehydratase (EC 4.2.1.47) 0.60 GFF4692 Catalase-peroxidase KatG (EC 1.11.1.21) low > 127
Synechococcus elongatus PCC 7942 0.71 Synpcc7942_1342 gmd GDP-mannose 4,6-dehydratase 0.82 Synpcc7942_1656 katG catalase/peroxidase HPI
Dechlorosoma suillum PS 0.71 Dsui_0085 GDP-mannose 4,6-dehydratase 0.85 Dsui_2233 catalase/peroxidase HPI low > 51
Pedobacter sp. GW460-11-11-14-LB5 0.70 CA265_RS19210 GDP-mannose 4,6-dehydratase 0.57 CA265_RS00900 catalase/peroxidase HPI
Paraburkholderia sabiae LMG 24235 0.70 QEN71_RS26360 GDP-mannose 4,6-dehydratase 0.59 QEN71_RS29740 catalase/peroxidase HPI low > 153
Paraburkholderia bryophila 376MFSha3.1 0.69 H281DRAFT_04776 GDPmannose 4,6-dehydratase 0.57 H281DRAFT_00053 catalase-peroxidase low > 103
Burkholderia phytofirmans PsJN 0.69 BPHYT_RS04000 GDP-mannose 4,6-dehydratase 0.60 BPHYT_RS10310 catalase-peroxidase low > 109
Mucilaginibacter yixingensis YX-36 DSM 26809 0.67 ABZR88_RS18375 GDP-mannose 4,6-dehydratase 0.61 ABZR88_RS16460 catalase/peroxidase HPI
Echinicola vietnamensis KMM 6221, DSM 17526 0.66 Echvi_4398 GDP-mannose 4,6-dehydratase 0.60 Echvi_1165 catalase/peroxidase HPI low > 79
Cellulophaga baltica 18 0.66 M666_RS03410 GDP-mannose 4,6-dehydratase 0.59 M666_RS03625 catalase/peroxidase HPI low > 67
Azospirillum sp. SherDot2 0.63 MPMX19_06644 GDP-mannose 4,6-dehydratase 0.58 MPMX19_03084 Catalase-peroxidase low > 112
Dinoroseobacter shibae DFL-12 0.63 Dshi_4139 GDP-mannose 4,6-dehydratase (RefSeq) 0.66 Dshi_3801 catalase/peroxidase HPI (RefSeq) low > 64
Caulobacter crescentus NA1000 Δfur 0.63 CCNA_00472 GDP-mannose 4,6 dehydratase 0.58 CCNA_03138 peroxidase/catalase katG low > 67
Caulobacter crescentus NA1000 0.63 CCNA_00472 GDP-mannose 4,6 dehydratase 0.58 CCNA_03138 peroxidase/catalase katG low > 66
Agrobacterium fabrum C58 0.59 Atu4789 GDP-mannose 4,6-dehydratase 0.73 Atu4642 catalase
Synechocystis sp000284455 PCC 6803 0.54 SGL_RS01905 GDP-mannose 4,6-dehydratase 0.74 SGL_RS09095 catalase/peroxidase HPI low > 51
Rahnella sp. WP5 0.52 EX31_RS02865 GDP-mannose 4,6-dehydratase 0.54 EX31_RS11140 catalase/peroxidase HPI low > 89
Mycobacterium tuberculosis H37Rv 0.48 Rv1511 GDP-D-mannose dehydratase GmdA (GDP-mannose 4,6 dehydratase) (GMD) 0.52 Rv1908c Catalase-peroxidase-peroxynitritase T KatG low > 58
Ralstonia solanacearum PSI07 0.47 RPSI07_RS19840 GDP-mannose 4,6-dehydratase 0.62 RPSI07_RS20110 catalase/peroxidase HPI low > 81
Xanthomonas campestris pv. campestris strain 8004 0.46 Xcc-8004.4503.1 GDP-mannose 4,6-dehydratase (EC 4.2.1.47) 0.59 Xcc-8004.3762.1 Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7) low > 74
Pseudomonas putida KT2440 0.46 PP_1799 GDP-mannose 4,6-dehydratase 0.59 PP_3668 Catalase-peroxidase low > 96
Pseudomonas sp. SVBP6 0.45 COO64_RS06615 gmd GDP-mannose 4,6-dehydratase 0.60 COO64_RS08175 katG catalase/peroxidase HPI low > 93
Pseudomonas syringae pv. syringae B728a ΔmexB 0.45 Psyr_0916 GDP-mannose 4,6-dehydratase 0.62 Psyr_4208 heme catalase/peroxidase low > 86
Pseudomonas syringae pv. syringae B728a 0.45 Psyr_0916 GDP-mannose 4,6-dehydratase 0.62 Psyr_4208 heme catalase/peroxidase low > 86
Rhodopseudomonas palustris CGA009 0.45 TX73_020470 GDP-mannose 4,6-dehydratase 0.59 TX73_002230 catalase/peroxidase HPI low > 86
Bosea sp. OAE506 0.44 ABIE41_RS02910 GDP-mannose 4,6-dehydratase 0.76 ABIE41_RS01200 catalase/peroxidase HPI low > 77
Brevundimonas sp. GW460-12-10-14-LB2 0.43 A4249_RS12980 GDP-mannose 4,6-dehydratase 0.57 A4249_RS12750 catalase/peroxidase HPI low > 48
Pseudomonas fluorescens FW300-N2E3 0.42 AO353_10245 GDP-mannose 4,6-dehydratase 0.60 AO353_23210 hydroperoxidase low > 101
Pseudomonas fluorescens FW300-N2E2 0.40 Pf6N2E2_4242 GDP-mannose 4,6-dehydratase (EC 4.2.1.47) 0.60 Pf6N2E2_3430 Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7) low > 103
Pseudomonas fluorescens FW300-N2C3 0.40 AO356_11835 GDP-mannose 4,6-dehydratase 0.60 AO356_07735 hydroperoxidase low > 104
Pseudomonas sp. S08-1 0.40 OH686_11980 GDP-mannose 4,6-dehydratase 0.58 OH686_15490 catalase/peroxidase HPI low > 80
Pseudomonas sp. DMC3 0.40 GFF545 GDP-mannose 4,6-dehydratase 0.61 GFF1038 Catalase-peroxidase low > 89
Pseudomonas fluorescens FW300-N1B4 0.39 Pf1N1B4_1965 GDP-mannose 4,6-dehydratase (EC 4.2.1.47) 0.58 Pf1N1B4_4230 Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7) low > 87
Pantoea sp. MT58 0.11 IAI47_18500 dTDP-glucose 4,6-dehydratase 0.54 IAI47_07215 catalase/peroxidase HPI
Escherichia coli HS(pFamp)R (ATCC 700891) 0.10 OHPLBJKB_04266 dTDP-glucose 4,6-dehydratase 2 0.57 OHPLBJKB_04108 Catalase-peroxidase low > 73
Erwinia amylovora T8 0.10 OLJFJH_12090 dTDP-glucose 4 6-dehydratase 0.54 OLJFJH_12450 catalase/peroxidase HPI

Not shown: 24 genomes with orthologs for CSW01_01280 only; 22 genomes with orthologs for CSW01_07835 only