Conservation of cofitness between CSW01_06990 and CSW01_06715 in Vibrio cholerae E7946 ATCC 55056

53 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_06990 QacE family quaternary ammonium compound efflux SMR transporter 1.0 CSW01_06715 tripartite tricarboxylate transporter permease 0.51 18
Pseudomonas sp. BP01 0.65 JOY50_RS28055 sugE quaternary ammonium compound efflux SMR transporter SugE 0.41 JOY50_RS14610 tripartite tricarboxylate transporter permease low > 84
Pseudomonas sp. SVBP6 0.65 COO64_RS07120 sugE quaternary ammonium compound efflux SMR transporter SugE 0.40 COO64_RS16470 tripartite tricarboxylate transporter permease low > 93
Pseudomonas fluorescens FW300-N2E3 0.65 AO353_02525 molecular chaperone 0.41 AO353_17570 tripartite tricarboxylate transporter TctA low > 101
Pseudomonas fluorescens FW300-N1B4 0.64 Pf1N1B4_3729 Quaternary ammonium compound-resistance protein SugE 0.41 Pf1N1B4_3311 Tricarboxylate transport membrane protein TctA low > 87
Pseudomonas putida KT2440 0.64 PP_1701 transporter 0.41 PP_1416 putative Tricarboxylate transport protein TctA — —
Pseudomonas fluorescens GW456-L13 0.64 PfGW456L13_4218 Quaternary ammonium compound-resistance protein SugE 0.41 PfGW456L13_4528 Tricarboxylate transport membrane protein TctA low > 87
Pseudomonas fluorescens FW300-N2C3 0.63 AO356_19255 molecular chaperone 0.41 AO356_04625 tripartite tricarboxylate transporter TctA low > 104
Pseudomonas fluorescens FW300-N2E2 0.63 Pf6N2E2_5766 Quaternary ammonium compound-resistance protein SugE 0.41 Pf6N2E2_2770 Tricarboxylate transport membrane protein TctA low > 103
Pseudomonas sp. RS175 0.63 PFR28_03184 Guanidinium exporter 0.40 PFR28_00679 hypothetical protein low > 88
Pseudomonas sp. DMC3 0.63 GFF2572 Guanidinium exporter 0.39 GFF2268 hypothetical protein low > 89
Pseudomonas orientalis W4I3 0.63 QF045_RS11900 quaternary ammonium compound efflux SMR transporter SugE 0.41 QF045_RS09780 tripartite tricarboxylate transporter permease low > 93
Pseudomonas aeruginosa MRSN321 0.62 DY961_RS00570 sugE;go_component=membrane|0016020||IEA;go_function=transmembrane quaternary ammonium compound efflux SMR transporter SugE 0.38 DY961_RS08745 tripartite tricarboxylate transporter permease low > 100
Pseudomonas aeruginosa PUPa3 0.62 DQ20_RS40465 sugE;go_component=membrane|0016020||IEA;go_function=transmembrane quaternary ammonium compound efflux SMR transporter SugE 0.38 DQ20_RS44105 tripartite tricarboxylate transporter permease low > 101
Pseudomonas aeruginosa PA14 0.62 IKLFDK_16715 quaternary ammonium compound efflux SMR transporter SugE 0.38 IKLFDK_03210 Tricarboxylate transport membrane protein TctA low > 98
Pseudomonas segetis P6 0.62 MPMX49_01733 Guanidinium exporter 0.40 MPMX49_01389 hypothetical protein low > 75
Pseudomonas fluorescens SBW25 0.62 PFLU_RS09245 quaternary ammonium compound efflux SMR transporter SugE 0.41 PFLU_RS07140 tripartite tricarboxylate transporter permease low > 109
Pseudomonas fluorescens SBW25-INTG 0.62 PFLU_RS09245 quaternary ammonium compound efflux SMR transporter SugE 0.41 PFLU_RS07140 tripartite tricarboxylate transporter permease low > 109
Pseudomonas simiae WCS417 0.62 PS417_09235 molecular chaperone 0.41 PS417_07065 tripartite tricarboxylate transporter TctA low > 88
Pseudomonas lactucae CFBP13502 0.62 GEMAOFIL_01970 Guanidinium exporter 0.42 GEMAOFIL_01561 hypothetical protein low > 96
Pseudomonas sp. S08-1 0.61 OH686_19635 small multidrug resistance family (SMR) protein 0.39 OH686_19985 Tripartite tricarboxylate transporter TctA family low > 80
Rhizobium sp. OAE497 0.59 ABIE40_RS09885 quaternary ammonium compound efflux SMR transporter SugE 0.37 ABIE40_RS15410 tripartite tricarboxylate transporter permease low > 107
Enterobacter sp. TBS_079 0.58 MPMX20_00430 Guanidinium exporter 0.40 MPMX20_03195 hypothetical protein low > 85
Klebsiella michiganensis M5al 0.58 BWI76_RS02430 multidrug transporter 0.42 BWI76_RS20045 hypothetical protein low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.58 GFF2001 Quaternary ammonium compound-resistance protein SugE 0.42 GFF1562 Tricarboxylate transport membrane protein TctA low > 78
Azospirillum brasilense Sp245 0.57 AZOBR_RS09160 multidrug transporter 0.38 AZOBR_RS25235 hypothetical protein low > 97
Sinorhizobium meliloti 1021 0.57 SMc01278 chaperone-like protein 0.39 SM_b20027 hypothetical protein low > 103
Serratia liquefaciens MT49 0.56 IAI46_01525 quaternary ammonium compound efflux SMR transporter SugE 0.40 IAI46_17890 tripartite tricarboxylate transporter permease low > 87
Rhodopseudomonas palustris CGA009 0.56 TX73_011815 quaternary ammonium compound efflux SMR transporter SugE 0.39 TX73_018100 tripartite tricarboxylate transporter permease low > 86
Bosea sp. OAE506 0.56 ABIE41_RS19675 quaternary ammonium compound efflux SMR transporter SugE 0.38 ABIE41_RS22680 tripartite tricarboxylate transporter permease low > 77
Desulfovibrio vulgaris Miyazaki F 0.55 DvMF_3195 small multidrug resistance protein (RefSeq) 0.26 DvMF_1999 protein of unknown function DUF112 transmembrane (RefSeq) low > 51
Escherichia coli BL21 0.55 ECD_04020 multidrug efflux system protein 0.29 ECD_03719 hypothetical protein low > 61
Escherichia fergusonii Becca 0.55 EFB2_04385 Guanidinium exporter 0.29 EFB2_04789 hypothetical protein low > 86
Azospirillum sp. SherDot2 0.55 MPMX19_00878 Guanidinium exporter 0.36 MPMX19_00428 hypothetical protein low > 112
Escherichia coli ECOR38 0.55 HEPCGN_10600 sugE quaternary ammonium compound efflux SMR transporter SugE 0.29 HEPCGN_12980 C4-dicarboxylate ABC transporter permease low > 88
Escherichia coli Nissle 1917 0.55 ECOLIN_RS24100 quaternary ammonium compound efflux SMR transporter SugE 0.29 ECOLIN_RS22080 tripartite tricarboxylate transporter permease low > 55
Variovorax sp. OAS795 0.54 ABID97_RS10520 quaternary ammonium compound efflux SMR transporter SugE 0.37 ABID97_RS25820 tripartite tricarboxylate transporter permease low > 91
Xanthobacter sp. DMC5 0.50 GFF648 Guanidinium exporter 0.38 GFF2404 hypothetical protein — —
Pseudomonas stutzeri RCH2 0.46 Psest_0857 Membrane transporters of cations and cationic drugs 0.39 Psest_0208 Uncharacterized protein conserved in bacteria low > 67
Ralstonia sp. UNC404CL21Col 0.41 ABZR87_RS21585 multidrug efflux SMR transporter 0.37 ABZR87_RS09270 tripartite tricarboxylate transporter permease low > 80
Dickeya dianthicola 67-19 0.34 HGI48_RS06305 multidrug efflux SMR transporter 0.40 HGI48_RS14470 tripartite tricarboxylate transporter permease low > 71
Acidovorax sp. GW101-3H11 0.34 Ac3H11_2948 Ethidium bromide-methyl viologen resistance protein EmrE 0.36 Ac3H11_1732 Tricarboxylate transport membrane protein TctA low > 79
Pseudomonas syringae pv. syringae B728a 0.33 Psyr_0541 Small multidrug resistance protein 0.42 Psyr_3968 Protein of unknown function DUF112 low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.33 Psyr_0541 Small multidrug resistance protein 0.42 Psyr_3968 Protein of unknown function DUF112 low > 86
Dickeya dadantii 3937 0.33 DDA3937_RS06260 multidrug efflux SMR transporter 0.40 DDA3937_RS14500 tripartite tricarboxylate transporter permease low > 74
Dickeya dianthicola ME23 0.32 DZA65_RS06650 multidrug transporter 0.40 DZA65_RS15405 tripartite tricarboxylate transporter permease low > 75
Hydrogenophaga sp. GW460-11-11-14-LB1 0.32 GFF4245 Ethidium bromide-methyl viologen resistance protein EmrE 0.40 GFF3031 Tricarboxylate transport membrane protein TctA low > 90
Marinobacter adhaerens HP15 0.32 HP15_958 small multidrug resistance protein 0.42 HP15_2659 Citrate uptake transporter, large transmembrane component TctA (from data) low > 73
Pantoea agglomerans CFBP13505 P0401 0.31 PagCFBP13505_RS02465 multidrug/spermidine efflux SMR transporter subunit MdtI 0.42 PagCFBP13505_RS00155 tripartite tricarboxylate transporter permease low > 74
Variovorax sp. SCN45 0.30 GFF2129 small multidrug resistance family (SMR) protein 0.38 GFF5021 Tripartite tricarboxylate transporter TctA family low > 127
Dinoroseobacter shibae DFL-12 0.29 Dshi_1638 small multidrug resistance protein (RefSeq) 0.52 Dshi_3121 Tricarboxylate transport membrane protein TctA (from data) low > 64
Pantoea sp. MT58 0.28 IAI47_08635 multidrug/spermidine efflux SMR transporter subunit MdtI 0.41 IAI47_06200 tripartite tricarboxylate transporter permease low > 76
Herbaspirillum seropedicae SmR1 0.28 HSERO_RS23145 multidrug transporter 0.24 HSERO_RS16690 C4-dicarboxylate ABC transporter permease low > 78
Cupriavidus basilensis FW507-4G11 0.27 RR42_RS14705 multidrug transporter 0.37 RR42_RS34870 hypothetical protein low > 128

Not shown: 46 genomes with orthologs for CSW01_06990 only; 6 genomes with orthologs for CSW01_06715 only