Conservation of cofitness between CSW01_02445 and CSW01_06665 in Vibrio cholerae E7946 ATCC 55056

55 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_02445 hypothetical protein 1.0 CSW01_06665 DNA-binding response regulator 0.44 7
Rahnella sp. WP5 0.62 EX31_RS02695 YggT family protein 0.38 EX31_RS06520 two-component system response regulator RstA low > 89
Pectobacterium carotovorum WPP14 0.61 HER17_RS03800 YggT family protein 0.40 HER17_RS09695 two-component system response regulator RstA low > 75
Serratia liquefaciens MT49 0.58 IAI46_21420 YggT family protein 0.40 IAI46_13300 two-component system response regulator RstA low > 86
Erwinia tracheiphila SCR3 0.57 LU632_RS05455 YggT family protein 0.38 LU632_RS11455 rstA two-component system response regulator RstA low > 74
Pantoea sp. MT58 0.57 IAI47_03590 YggT family protein 0.40 IAI47_09545 two-component system response regulator RstA low > 76
Shewanella loihica PV-4 0.55 Shew_1135 protein of unknown function YGGT (RefSeq) 0.58 Shew_0081 two component transcriptional regulator (RefSeq) — —
Dickeya dadantii 3937 0.55 DDA3937_RS17310 YggT family protein 0.42 DDA3937_RS12230 two-component system response regulator RstA low > 74
Dickeya dianthicola 67-19 0.55 HGI48_RS17355 YggT family protein 0.42 HGI48_RS12320 two-component system response regulator RstA low > 71
Shewanella oneidensis MR-1 0.55 SO3355 conserved hypothetical protein (NCBI ptt file) 0.40 SO3594 transcriptional regulatory protein RstA, putative (NCBI ptt file) low > 76
Dickeya dianthicola ME23 0.55 DZA65_RS18445 YggT family protein 0.42 DZA65_RS12760 two-component system response regulator RstA low > 75
Shewanella amazonensis SB2B 0.54 Sama_2479 protein of unknown function YGGT (RefSeq) 0.40 Sama_0154 response regulator receiver protein (RefSeq) — —
Klebsiella michiganensis M5al 0.54 BWI76_RS24105 resistance protein 0.40 BWI76_RS16250 DNA-binding response regulator low > 92
Escherichia coli Nissle 1917 0.52 ECOLIN_RS16420 osmotic shock tolerance protein YggT 0.40 ECOLIN_RS08980 two-component system response regulator RstA — —
Escherichia coli BL21 0.52 ECD_02782 putative inner membrane protein; compensates for loss in K+ uptake 0.40 ECD_01577 response regulator of RstAB two-component system — —
Escherichia coli ECRC101 0.52 MCAODC_09770 yggT osmotic shock tolerance protein YggT 0.40 MCAODC_17745 rstA two-component system response regulator RstA 0.55 32
Escherichia fergusonii Becca 0.52 EFB2_00950 hypothetical protein 0.40 EFB2_02384 Transcriptional regulatory protein RstA low > 86
Escherichia coli ECOR27 0.52 NOLOHH_11120 yggT osmotic shock tolerance protein YggT 0.40 NOLOHH_18170 rstA two-component system response regulator RstA — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.52 OHPLBJKB_00764 hypothetical protein 0.40 OHPLBJKB_02118 Transcriptional regulatory protein RstA low > 73
Escherichia coli ECRC100 0.52 OKFHMN_19250 yggT osmotic shock tolerance protein YggT 0.40 OKFHMN_27665 rstA two-component system response regulator RstA — —
Escherichia coli ECRC99 0.52 KEDOAH_08890 yggT osmotic shock tolerance protein YggT 0.40 KEDOAH_00440 rstA two-component system response regulator RstA — —
Escherichia coli ECRC102 0.52 NIAGMN_17015 yggT osmotic shock tolerance protein YggT 0.40 NIAGMN_00410 rstA two-component system response regulator RstA — —
Escherichia coli ECRC98 0.52 JDDGAC_22880 yggT osmotic shock tolerance protein YggT 0.40 JDDGAC_02255 rstA two-component system response regulator RstA low > 86
Escherichia coli ECRC62 0.52 BNILDI_09700 yggT osmotic shock tolerance protein YggT 0.40 BNILDI_16960 rstA two-component system response regulator RstA low > 75
Escherichia coli ECOR38 0.52 HEPCGN_18555 yggT osmotic shock tolerance protein YggT 0.40 HEPCGN_06040 rstA two-component system response regulator RstA low > 87
Escherichia coli BW25113 0.52 b2952 yggT predicted inner membrane protein (NCBI) 0.40 b1608 rstA DNA-binding response regulator in two-component regulatory system with RstB (RefSeq) low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.52 GFF3055 Integral membrane protein YggT, involved in response to extracytoplasmic stress (osmotic shock) 0.40 GFF1800 Transcriptional regulatory protein RstA low > 78
Shewanella sp. ANA-3 0.51 Shewana3_1192 protein of unknown function YGGT (RefSeq) 0.40 Shewana3_3184 two component transcriptional regulator (RefSeq) low > 73
Enterobacter sp. TBS_079 0.50 MPMX20_03810 hypothetical protein 0.40 MPMX20_02026 Transcriptional regulatory protein RstA low > 85
Enterobacter asburiae PDN3 0.50 EX28DRAFT_2990 Predicted integral membrane protein 0.40 EX28DRAFT_1549 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain low > 76
Pseudomonas stutzeri RCH2 0.37 Psest_0282 Predicted integral membrane protein 0.41 Psest_2730 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain — —
Pseudomonas fluorescens FW300-N2E3 0.35 AO353_08170 hypothetical protein 0.47 AO353_02835 chemotaxis protein CheY low > 101
Pseudomonas sp. S08-1 0.35 OH686_10985 YggT-like protein 0.50 OH686_20345 Two-component transcriptional response regulator, OmpR family low > 80
Pseudomonas fluorescens FW300-N1B4 0.35 Pf1N1B4_2340 Integral membrane protein YggT, involved in response to extracytoplasmic stress (osmotic shock) 0.46 Pf1N1B4_3478 Transcriptional regulatory protein RstA — —
Pseudomonas syringae pv. syringae B728a 0.34 Psyr_0475 Protein of unknown function YGGT 0.47 Psyr_3716 Response regulator receiver:Transcriptional regulatory protein, C-terminal low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.34 Psyr_0475 Protein of unknown function YGGT 0.47 Psyr_3716 Response regulator receiver:Transcriptional regulatory protein, C-terminal low > 86
Pseudomonas putida KT2440 0.33 PP_5096 putative factor involved in shape determination 0.47 PP_1181 DNA-binding response regulator low > 96
Paraburkholderia sabiae LMG 24235 0.32 QEN71_RS03230 YggT family protein 0.42 QEN71_RS35010 response regulator low > 153
Cupriavidus basilensis FW507-4G11 0.32 RR42_RS36110 membrane protein 0.37 RR42_RS14260 transcriptional regulator low > 128
Pseudomonas fluorescens FW300-N2C3 0.32 AO356_13415 hypothetical protein 0.47 AO356_18940 chemotaxis protein CheY low > 104
Pseudomonas fluorescens FW300-N2E2 0.32 Pf6N2E2_4599 Integral membrane protein YggT, involved in response to extracytoplasmic stress (osmotic shock) 0.48 Pf6N2E2_5699 Transcriptional regulatory protein RstA low > 103
Pseudomonas simiae WCS417 0.32 PS417_26735 membrane protein 0.47 PS417_21535 chemotaxis protein CheY — —
Pseudomonas sp. RS175 0.31 PFR28_04244 hypothetical protein 0.48 PFR28_03249 Transcriptional regulatory protein RstA low > 88
Pseudomonas fluorescens GW456-L13 0.31 PfGW456L13_1009 Integral membrane protein YggT, involved in response to extracytoplasmic stress (osmotic shock) 0.47 PfGW456L13_2007 Transcriptional regulatory protein RstA low > 87
Pseudomonas fluorescens SBW25 0.31 PFLU_RS28380 YggT family protein 0.47 PFLU_RS23150 response regulator low > 109
Marinobacter adhaerens HP15 0.31 HP15_286 protein of unknown function YGGT 0.48 HP15_746 two component transcriptional regulator, winged helix family low > 73
Pseudomonas fluorescens SBW25-INTG 0.31 PFLU_RS28380 YggT family protein 0.47 PFLU_RS23150 response regulator low > 109
Ralstonia solanacearum GMI1000 0.30 RS_RS23805 YggT family protein 0.40 RS_RS15395 DNA-binding response regulator — —
Ralstonia sp. UNC404CL21Col 0.28 ABZR87_RS18295 YggT family protein 0.41 ABZR87_RS03100 response regulator transcription factor low > 80
Ralstonia solanacearum PSI07 0.26 RPSI07_RS06140 YggT family protein 0.42 RPSI07_RS09795 DNA-binding response regulator low > 81
Kangiella aquimarina DSM 16071 0.26 B158DRAFT_0198 Predicted integral membrane protein 0.39 B158DRAFT_2448 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain low > 40
Dechlorosoma suillum PS 0.22 Dsui_0601 putative integral membrane protein 0.47 Dsui_1529 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain — —
Ralstonia solanacearum UW163 0.22 UW163_RS21640 YggT family protein 0.41 UW163_RS06165 DNA-binding response regulator — —
Ralstonia solanacearum IBSBF1503 0.22 RALBFv3_RS17510 YggT family protein 0.41 RALBFv3_RS07455 DNA-binding response regulator low > 76
Acinetobacter radioresistens SK82 0.19 MPMX26_00573 hypothetical protein 0.48 MPMX26_02559 Transcriptional regulatory protein RstA — —
Dyella japonica UNC79MFTsu3.2 0.17 ABZR86_RS10430 YggT family protein 0.42 ABZR86_RS19120 response regulator low > 74

Not shown: 13 genomes with orthologs for CSW01_02445 only; 0 genomes with orthologs for CSW01_06665 only