Conservation of cofitness between CSW01_06095 and CSW01_06455 in Vibrio cholerae E7946 ATCC 55056

45 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_06095 imidazolonepropionase 1.0 CSW01_06455 DNA-binding response regulator 0.42 15
Ralstonia sp. UNC404CL21Col 0.52 ABZR87_RS01015 imidazolonepropionase 0.38 ABZR87_RS05230 response regulator transcription factor low > 80
Sphingobium sp. HT1-2 0.52 GFF1211 Imidazolonepropionase (EC 3.5.2.7) 0.36 GFF3503 two-component response regulator low > 95
Shewanella amazonensis SB2B 0.51 Sama_0080 imidazolonepropionase (RefSeq) 0.30 Sama_1873 response regulator receiver protein (RefSeq) low > 62
Ralstonia solanacearum GMI1000 0.50 RS_RS13240 imidazolonepropionase 0.38 RS_RS00100 DNA-binding response regulator low > 80
Ralstonia solanacearum PSI07 0.50 RPSI07_RS11925 imidazolonepropionase 0.38 RPSI07_RS23850 DNA-binding response regulator low > 81
Caulobacter crescentus NA1000 Δfur 0.50 CCNA_01011 imidazolonepropionase 0.28 CCNA_01208 two-component response regulator low > 67
Caulobacter crescentus NA1000 0.50 CCNA_01011 imidazolonepropionase 0.28 CCNA_01208 two-component response regulator low > 66
Agrobacterium fabrum C58 0.49 Atu3934 imidazolonepropionase 0.40 Atu5267 two component response regulator
Paraburkholderia sabiae LMG 24235 0.49 QEN71_RS23495 imidazolonepropionase 0.39 QEN71_RS32890 response regulator transcription factor low > 153
Sphingomonas koreensis DSMZ 15582 0.49 Ga0059261_3964 Imidazolonepropionase (EC 3.5.2.7) (from data) 0.27 Ga0059261_3917 two component transcriptional regulator, LuxR family low > 68
Ralstonia solanacearum IBSBF1503 0.49 RALBFv3_RS05380 imidazolonepropionase 0.38 RALBFv3_RS09500 DNA-binding response regulator low > 76
Ralstonia solanacearum UW163 0.49 UW163_RS08245 imidazolonepropionase 0.38 UW163_RS04080 DNA-binding response regulator
Phaeobacter inhibens DSM 17395 0.48 PGA1_c36350 Imidazolonepropionase (EC 3.5.2.7) (from data) 0.42 PGA1_c20200 two-component signal transduction system, response regulator low > 62
Kangiella aquimarina DSM 16071 0.48 B158DRAFT_1437 imidazolonepropionase (EC 3.5.2.7) 0.38 B158DRAFT_1737 two component transcriptional regulator, LuxR family low > 40
Burkholderia phytofirmans PsJN 0.48 BPHYT_RS07575 imidazolonepropionase 0.35 BPHYT_RS22230 LuxR family transcriptional regulator low > 109
Rhodanobacter denitrificans FW104-10B01 0.48 LRK54_RS16230 imidazolonepropionase 0.39 LRK54_RS11600 response regulator transcription factor low > 59
Rhodanobacter denitrificans MT42 0.48 LRK55_RS15980 imidazolonepropionase 0.39 LRK55_RS11330 response regulator transcription factor low > 63
Pseudomonas fluorescens FW300-N2E2 0.48 Pf6N2E2_3798 Imidazolonepropionase (EC 3.5.2.7) (from data) 0.38 Pf6N2E2_1296 DNA-binding response regulator, LuxR family low > 103
Cupriavidus basilensis FW507-4G11 0.48 RR42_RS16905 Imidazolonepropionase (EC 3.5.2.7) (from data) 0.33 RR42_RS20525 LuxR family transcriptional regulator low > 128
Paraburkholderia bryophila 376MFSha3.1 0.48 H281DRAFT_04869 imidazolonepropionase 0.39 H281DRAFT_03153 two component transcriptional regulator, LuxR family low > 103
Variovorax sp. OAS795 0.47 ABID97_RS03435 imidazolonepropionase 0.37 ABID97_RS22515 response regulator transcription factor low > 91
Pseudomonas fluorescens FW300-N1B4 0.47 Pf1N1B4_1579 Imidazolonepropionase (EC 3.5.2.7) (from data) 0.38 Pf1N1B4_4833 DNA-binding response regulator, LuxR family low > 87
Rhodanobacter sp. FW510-T8 0.47 OKGIIK_08425 hutI imidazolonepropionase 0.28 OKGIIK_03330 citB DNA-binding response regulator low > 53
Dyella japonica UNC79MFTsu3.2 0.47 ABZR86_RS07870 imidazolonepropionase 0.28 ABZR86_RS21335 response regulator transcription factor low > 74
Pseudomonas sp. BP01 0.47 JOY50_RS09535 hutI imidazolonepropionase 0.29 JOY50_RS24990 response regulator transcription factor low > 84
Pseudomonas fluorescens FW300-N2C3 0.47 AO356_09595 Imidazolonepropionase (EC 3.5.2.7) (from data) 0.36 AO356_25670 regulator low > 104
Pseudomonas sp. RS175 0.47 PFR28_04972 Imidazolonepropionase 0.38 PFR28_01618 Oxygen regulatory protein NreC low > 88
Xanthomonas campestris pv. campestris strain 8004 0.47 Xcc-8004.3295.1 Imidazolonepropionase (EC 3.5.2.7) 0.31 Xcc-8004.3859.1 Two-component system regulatory protein 0.58 61
Pseudomonas putida KT2440 0.47 PP_5030 Imidazolonepropionase 0.30 PP_2126 DNA-binding response regulator, LuxR family low > 96
Pseudomonas sp. SVBP6 0.47 COO64_RS13425 hutI imidazolonepropionase 0.38 COO64_RS09150 response regulator transcription factor low > 93
Pseudomonas lactucae CFBP13502 0.46 GEMAOFIL_00576 Imidazolonepropionase 0.30 GEMAOFIL_03209 Transcriptional regulatory protein LnrK low > 96
Pseudomonas syringae pv. syringae B728a 0.46 Psyr_4835 imidazolonepropionase 0.30 Psyr_1940 regulatory protein, LuxR:Response regulator receiver
Pseudomonas syringae pv. syringae B728a ΔmexB 0.46 Psyr_4835 imidazolonepropionase 0.30 Psyr_1940 regulatory protein, LuxR:Response regulator receiver
Rhizobium sp. OAE497 0.46 ABIE40_RS20350 imidazolonepropionase 0.27 ABIE40_RS22645 response regulator transcription factor low > 107
Variovorax sp. SCN45 0.46 GFF6402 Imidazolonepropionase (EC 3.5.2.7) 0.35 GFF5818 Two-component transcriptional response regulator, NarL/FixJ family low > 127
Pseudomonas fluorescens FW300-N2E3 0.46 AO353_12280 Imidazolonepropionase (EC 3.5.2.7) (from data) 0.36 AO353_25245 regulator low > 101
Pseudomonas fluorescens SBW25 0.46 PFLU_RS01815 imidazolonepropionase 0.29 PFLU_RS14300 response regulator transcription factor
Rhodanobacter sp000427505 FW510-R12 0.46 LRK53_RS12565 imidazolonepropionase 0.38 LRK53_RS16955 response regulator transcription factor low > 59
Pseudomonas fluorescens SBW25-INTG 0.46 PFLU_RS01815 imidazolonepropionase 0.29 PFLU_RS14300 response regulator transcription factor low > 109
Hydrogenophaga sp. GW460-11-11-14-LB1 0.45 GFF3588 Imidazolonepropionase (EC 3.5.2.7) 0.32 GFF3272 DNA-binding response regulator, LuxR family low > 90
Lysobacter sp. OAE881 0.44 ABIE51_RS06250 imidazolonepropionase 0.33 ABIE51_RS10320 response regulator transcription factor low > 62
Bacteroides thetaiotaomicron VPI-5482 0.30 BT2692 imidazolonepropionase (NCBI ptt file) 0.17 BT0156 transcriptional regulator (NCBI ptt file) low > 81
Bacteroides ovatus ATCC 8483 0.29 BACOVA_00993 imidazolonepropionase 0.18 BACOVA_01281 transcriptional regulator, LuxR family low > 96
Bacteroides stercoris CC31F 0.29 HMPREF1181_RS00350 imidazolonepropionase 0.27 HMPREF1181_RS04510 response regulator transcription factor low > 56
Cellulophaga baltica 18 0.27 M666_RS07220 imidazolonepropionase 0.38 M666_RS04555 response regulator transcription factor low > 67

Not shown: 39 genomes with orthologs for CSW01_06095 only; 16 genomes with orthologs for CSW01_06455 only