Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_03020 | | serine endoprotease DegQ | 1.0 | CSW01_03210 | | iron ABC transporter permease | 0.65 | 13 |
Dickeya dadantii 3937 | 0.63 | DDA3937_RS01605 | | serine endoprotease DegQ | 0.26 | DDA3937_RS16000 | | iron ABC transporter permease | low | > 74 |
Shewanella amazonensis SB2B | 0.63 | Sama_3073 | | serine protease (RefSeq) | 0.45 | Sama_0667 | | iron(III) ABC transporter, permease protein (RefSeq) | low | > 62 |
Dickeya dianthicola 67-19 | 0.63 | HGI48_RS01520 | | serine endoprotease DegQ | 0.26 | HGI48_RS16120 | | iron ABC transporter permease | low | > 71 |
Dickeya dianthicola ME23 | 0.63 | DZA65_RS01585 | | serine endoprotease DegQ | 0.26 | DZA65_RS17205 | | iron ABC transporter permease | low | > 75 |
Pectobacterium carotovorum WPP14 | 0.62 | HER17_RS19985 | | serine endoprotease DegQ | 0.33 | HER17_RS05515 | | iron ABC transporter permease | low | > 75 |
Shewanella oneidensis MR-1 | 0.60 | SO3942 | | serine protease, HtrA/DegQ/DegS family (NCBI ptt file) | 0.50 | SO0743 | | iron(III) ABC transporter, permease protein (NCBI ptt file) | — | — |
Shewanella sp. ANA-3 | 0.60 | Shewana3_0690 | | peptidase Do (RefSeq) | 0.51 | Shewana3_3516 | | binding-protein-dependent transport systems inner membrane component (RefSeq) | low | > 73 |
Shewanella loihica PV-4 | 0.60 | Shew_3296 | | protease Do (RefSeq) | 0.47 | Shew_0862 | | binding-protein-dependent transport systems inner membrane component (RefSeq) | low | > 60 |
Alteromonas macleodii MIT1002 | 0.59 | MIT1002_00842 | | Periplasmic pH-dependent serine endoprotease DegQ precursor | 0.12 | MIT1002_00116 | | Spermidine/putrescine transport system permease protein PotB | low | > 70 |
Klebsiella michiganensis M5al | 0.58 | BWI76_RS25365 | | serine endoprotease DegQ | 0.07 | BWI76_RS10475 | | binding-protein-dependent transport system inner membrane protein | low | > 92 |
Enterobacter sp. TBS_079 | 0.57 | MPMX20_04138 | | Periplasmic pH-dependent serine endoprotease DegQ | 0.08 | MPMX20_01120 | | hypothetical protein | low | > 85 |
Enterobacter asburiae PDN3 | 0.57 | EX28DRAFT_3283 | | periplasmic serine protease, Do/DeqQ family | 0.08 | EX28DRAFT_2436 | | ABC-type Fe3+ transport system, permease component | low | > 76 |
Rahnella sp. WP5 | 0.56 | EX31_RS12475 | | Do family serine endopeptidase | 0.28 | EX31_RS17575 | | iron ABC transporter permease | low | > 89 |
Erwinia tracheiphila SCR3 | 0.54 | LU632_RS21355 | | Do family serine endopeptidase | 0.07 | LU632_RS03340 | | iron ABC transporter permease | low | > 74 |
Agrobacterium fabrum C58 | 0.31 | Atu0977 | | serine protease DO-like protease | 0.38 | Atu0613 | | ABC transporter, membrane spanning protein | low | > 89 |
Rhizobium sp. OAE497 | 0.30 | ABIE40_RS20720 | | DegQ family serine endoprotease | 0.30 | ABIE40_RS21705 | | iron ABC transporter permease | low | > 107 |
Rhodospirillum rubrum S1H | 0.30 | Rru_A2662 | | Peptidase S1C, Do (NCBI) | 0.38 | Rru_A0768 | | Binding-protein-dependent transport systems inner membrane component (NCBI) | low | > 58 |
Rhodopseudomonas palustris CGA009 | 0.30 | TX73_016660 | | DegQ family serine endoprotease | 0.24 | TX73_021530 | | iron ABC transporter permease | low | > 86 |
Sinorhizobium meliloti 1021 | 0.29 | SMc02365 | | protease precursor protein | 0.36 | SMc00775 | | iron(III) permease | low | > 103 |
Dinoroseobacter shibae DFL-12 | 0.29 | Dshi_2733 | | protease Do (RefSeq) | 0.36 | Dshi_2023 | | binding-protein-dependent transport systems inner membrane component (RefSeq) | — | — |
Pseudomonas aeruginosa PA14 | 0.29 | IKLFDK_03285 | | serine protease MucD | 0.28 | IKLFDK_27390 | | iron ABC transporter permease | low | > 101 |
Xanthobacter sp. DMC5 | 0.29 | GFF3126 | | Periplasmic serine endoprotease DegP | 0.31 | GFF360 | | hypothetical protein | — | — |
Pseudomonas fluorescens SBW25-INTG | 0.29 | PFLU_RS07245 | | DegQ family serine endoprotease | 0.32 | PFLU_RS28920 | | iron ABC transporter permease | low | > 109 |
Pseudomonas fluorescens SBW25 | 0.29 | PFLU_RS07245 | | DegQ family serine endoprotease | 0.32 | PFLU_RS28920 | | iron ABC transporter permease | low | > 109 |
Dechlorosoma suillum PS | 0.29 | Dsui_1606 | | periplasmic serine protease, Do/DeqQ family | 0.35 | Dsui_2942 | | ABC-type Fe3+ transport system, permease component | low | > 51 |
Bosea sp. OAE506 | 0.28 | ABIE41_RS12865 | | DegQ family serine endoprotease | 0.29 | ABIE41_RS15165 | | iron ABC transporter permease | low | > 77 |
Pseudomonas fluorescens GW456-L13 | 0.28 | PfGW456L13_4513 | | HtrA protease/chaperone protein | 0.29 | PfGW456L13_901 | | Ferric iron ABC transporter, permease protein | low | > 87 |
Pseudomonas fluorescens FW300-N2E3 | 0.28 | AO353_17640 | | serine peptidase | 0.32 | AO353_08740 | | iron ABC transporter permease | low | > 101 |
Marinobacter adhaerens HP15 | 0.28 | HP15_779 | | serine protease MucD precursor | 0.46 | HP15_1455 | | iron(III) ABC transporter, permease protein | low | > 73 |
Herbaspirillum seropedicae SmR1 | 0.28 | HSERO_RS21975 | | peptidase | 0.24 | HSERO_RS16585 | | iron ABC transporter permease | low | > 78 |
Pseudomonas fluorescens FW300-N1B4 | 0.28 | Pf1N1B4_3326 | | HtrA protease/chaperone protein | 0.32 | Pf1N1B4_2233 | | Ferric iron ABC transporter, permease protein | — | — |
Pseudomonas stutzeri RCH2 | 0.28 | Psest_3096 | | periplasmic serine protease, Do/DeqQ family | 0.27 | Psest_0180 | | ABC-type Fe3+ transport system, permease component | — | — |
Pseudomonas sp. DMC3 | 0.28 | GFF2280 | | Periplasmic serine endoprotease DegP | 0.30 | GFF311 | | hypothetical protein | low | > 89 |
Pseudomonas fluorescens FW300-N2E2 | 0.28 | Pf6N2E2_2753 | | HtrA protease/chaperone protein | 0.32 | Pf6N2E2_4484 | | Ferric iron ABC transporter, permease protein | low | > 103 |
Pseudomonas sp. SVBP6 | 0.28 | COO64_RS16540 | | DegQ family serine endoprotease | 0.30 | COO64_RS00965 | | iron ABC transporter permease | low | > 93 |
Pseudomonas fluorescens FW300-N2C3 | 0.28 | AO356_04560 | | serine peptidase | 0.32 | AO356_13030 | | iron ABC transporter permease | low | > 104 |
Pseudomonas putida KT2440 | 0.28 | PP_1430 | | putative periplasmic serine endoprotease DegP-like | 0.29 | PP_5195 | | putative Iron ABC transporter, permease protein | low | > 96 |
Pseudomonas simiae WCS417 | 0.28 | PS417_07135 | | serine peptidase | 0.31 | PS417_27260 | | iron ABC transporter permease | — | — |
Pseudomonas sp. BP01 | 0.28 | JOY50_RS14680 | | DegQ family serine endoprotease | 0.30 | JOY50_RS22420 | | ABC transporter permease | low | > 84 |
Phaeobacter inhibens DSM 17395 | 0.27 | PGA1_c23690 | | protease do | 0.35 | PGA1_c32540 | | putative Fe(3+)-transport system protein SfuB | low | > 62 |
Pseudomonas sp. S08-1 | 0.27 | OH686_20060 | | HtrA protease/chaperone protein | 0.32 | OH686_11180 | | Ferric iron ABC transporter, permease protein | low | > 80 |
Kangiella aquimarina DSM 16071 | 0.26 | B158DRAFT_2183 | | periplasmic serine protease, Do/DeqQ family | 0.30 | B158DRAFT_0541 | | ABC-type Fe3+ transport system, permease component | — | — |
Not shown: 40 genomes with orthologs for CSW01_03020 only; 14 genomes with orthologs for CSW01_03210 only