Conservation of cofitness between CSW01_03020 and CSW01_03210 in Vibrio cholerae E7946 ATCC 55056

42 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_03020 serine endoprotease DegQ 1.0 CSW01_03210 iron ABC transporter permease 0.65 13
Dickeya dadantii 3937 0.63 DDA3937_RS01605 serine endoprotease DegQ 0.26 DDA3937_RS16000 iron ABC transporter permease low > 74
Shewanella amazonensis SB2B 0.63 Sama_3073 serine protease (RefSeq) 0.45 Sama_0667 iron(III) ABC transporter, permease protein (RefSeq) low > 62
Dickeya dianthicola 67-19 0.63 HGI48_RS01520 serine endoprotease DegQ 0.26 HGI48_RS16120 iron ABC transporter permease low > 71
Dickeya dianthicola ME23 0.63 DZA65_RS01585 serine endoprotease DegQ 0.26 DZA65_RS17205 iron ABC transporter permease low > 75
Pectobacterium carotovorum WPP14 0.62 HER17_RS19985 serine endoprotease DegQ 0.33 HER17_RS05515 iron ABC transporter permease low > 75
Shewanella oneidensis MR-1 0.60 SO3942 serine protease, HtrA/DegQ/DegS family (NCBI ptt file) 0.50 SO0743 iron(III) ABC transporter, permease protein (NCBI ptt file) — —
Shewanella sp. ANA-3 0.60 Shewana3_0690 peptidase Do (RefSeq) 0.51 Shewana3_3516 binding-protein-dependent transport systems inner membrane component (RefSeq) low > 73
Shewanella loihica PV-4 0.60 Shew_3296 protease Do (RefSeq) 0.47 Shew_0862 binding-protein-dependent transport systems inner membrane component (RefSeq) low > 60
Alteromonas macleodii MIT1002 0.59 MIT1002_00842 Periplasmic pH-dependent serine endoprotease DegQ precursor 0.12 MIT1002_00116 Spermidine/putrescine transport system permease protein PotB low > 70
Klebsiella michiganensis M5al 0.58 BWI76_RS25365 serine endoprotease DegQ 0.07 BWI76_RS10475 binding-protein-dependent transport system inner membrane protein low > 92
Enterobacter sp. TBS_079 0.57 MPMX20_04138 Periplasmic pH-dependent serine endoprotease DegQ 0.08 MPMX20_01120 hypothetical protein low > 85
Enterobacter asburiae PDN3 0.57 EX28DRAFT_3283 periplasmic serine protease, Do/DeqQ family 0.08 EX28DRAFT_2436 ABC-type Fe3+ transport system, permease component low > 76
Rahnella sp. WP5 0.56 EX31_RS12475 Do family serine endopeptidase 0.28 EX31_RS17575 iron ABC transporter permease low > 89
Erwinia tracheiphila SCR3 0.54 LU632_RS21355 Do family serine endopeptidase 0.07 LU632_RS03340 iron ABC transporter permease low > 74
Agrobacterium fabrum C58 0.31 Atu0977 serine protease DO-like protease 0.38 Atu0613 ABC transporter, membrane spanning protein low > 89
Rhizobium sp. OAE497 0.30 ABIE40_RS20720 DegQ family serine endoprotease 0.30 ABIE40_RS21705 iron ABC transporter permease low > 107
Rhodospirillum rubrum S1H 0.30 Rru_A2662 Peptidase S1C, Do (NCBI) 0.38 Rru_A0768 Binding-protein-dependent transport systems inner membrane component (NCBI) low > 58
Rhodopseudomonas palustris CGA009 0.30 TX73_016660 DegQ family serine endoprotease 0.24 TX73_021530 iron ABC transporter permease low > 86
Sinorhizobium meliloti 1021 0.29 SMc02365 protease precursor protein 0.36 SMc00775 iron(III) permease low > 103
Xanthobacter sp. DMC5 0.29 GFF3126 Periplasmic serine endoprotease DegP 0.31 GFF360 hypothetical protein — —
Pseudomonas aeruginosa PA14 0.29 IKLFDK_03285 serine protease MucD 0.28 IKLFDK_27390 iron ABC transporter permease low > 101
Dinoroseobacter shibae DFL-12 0.29 Dshi_2733 protease Do (RefSeq) 0.36 Dshi_2023 binding-protein-dependent transport systems inner membrane component (RefSeq) — —
Pseudomonas fluorescens SBW25 0.29 PFLU_RS07245 DegQ family serine endoprotease 0.32 PFLU_RS28920 iron ABC transporter permease low > 109
Pseudomonas fluorescens SBW25-INTG 0.29 PFLU_RS07245 DegQ family serine endoprotease 0.32 PFLU_RS28920 iron ABC transporter permease low > 109
Dechlorosoma suillum PS 0.29 Dsui_1606 periplasmic serine protease, Do/DeqQ family 0.35 Dsui_2942 ABC-type Fe3+ transport system, permease component low > 51
Bosea sp. OAE506 0.28 ABIE41_RS12865 DegQ family serine endoprotease 0.29 ABIE41_RS15165 iron ABC transporter permease low > 77
Pseudomonas fluorescens GW456-L13 0.28 PfGW456L13_4513 HtrA protease/chaperone protein 0.29 PfGW456L13_901 Ferric iron ABC transporter, permease protein low > 87
Pseudomonas fluorescens FW300-N2E3 0.28 AO353_17640 serine peptidase 0.32 AO353_08740 iron ABC transporter permease low > 101
Herbaspirillum seropedicae SmR1 0.28 HSERO_RS21975 peptidase 0.24 HSERO_RS16585 iron ABC transporter permease low > 78
Marinobacter adhaerens HP15 0.28 HP15_779 serine protease MucD precursor 0.46 HP15_1455 iron(III) ABC transporter, permease protein low > 73
Pseudomonas fluorescens FW300-N1B4 0.28 Pf1N1B4_3326 HtrA protease/chaperone protein 0.32 Pf1N1B4_2233 Ferric iron ABC transporter, permease protein — —
Pseudomonas stutzeri RCH2 0.28 Psest_3096 periplasmic serine protease, Do/DeqQ family 0.27 Psest_0180 ABC-type Fe3+ transport system, permease component — —
Pseudomonas sp. DMC3 0.28 GFF2280 Periplasmic serine endoprotease DegP 0.30 GFF311 hypothetical protein low > 89
Pseudomonas fluorescens FW300-N2C3 0.28 AO356_04560 serine peptidase 0.32 AO356_13030 iron ABC transporter permease low > 104
Pseudomonas sp. SVBP6 0.28 COO64_RS16540 DegQ family serine endoprotease 0.30 COO64_RS00965 iron ABC transporter permease low > 93
Pseudomonas fluorescens FW300-N2E2 0.28 Pf6N2E2_2753 HtrA protease/chaperone protein 0.32 Pf6N2E2_4484 Ferric iron ABC transporter, permease protein low > 103
Pseudomonas simiae WCS417 0.28 PS417_07135 serine peptidase 0.31 PS417_27260 iron ABC transporter permease — —
Pseudomonas putida KT2440 0.28 PP_1430 putative periplasmic serine endoprotease DegP-like 0.29 PP_5195 putative Iron ABC transporter, permease protein low > 96
Pseudomonas sp. BP01 0.28 JOY50_RS14680 DegQ family serine endoprotease 0.30 JOY50_RS22420 ABC transporter permease low > 84
Phaeobacter inhibens DSM 17395 0.27 PGA1_c23690 protease do 0.35 PGA1_c32540 putative Fe(3+)-transport system protein SfuB low > 62
Pseudomonas sp. S08-1 0.27 OH686_20060 HtrA protease/chaperone protein 0.32 OH686_11180 Ferric iron ABC transporter, permease protein low > 80
Kangiella aquimarina DSM 16071 0.26 B158DRAFT_2183 periplasmic serine protease, Do/DeqQ family 0.30 B158DRAFT_0541 ABC-type Fe3+ transport system, permease component — —

Not shown: 40 genomes with orthologs for CSW01_03020 only; 14 genomes with orthologs for CSW01_03210 only