Conservation of cofitness between CSW01_00180 and CSW01_02460 in Vibrio cholerae E7946 ATCC 55056

45 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_00180 cytochrome c oxidase accessory protein CcoG 1.0 CSW01_02460 type IV pili twitching motility protein PilT 0.65 15
Shewanella oneidensis MR-1 0.62 SO4737 iron-sulfur cluster-binding protein (NCBI ptt file) 0.74 SO3351 pilT twitching motility protein PilT (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.61 Shewana3_4121 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein (RefSeq) 0.74 Shewana3_1195 pilus retraction ATPase PilT (RefSeq) low > 73
Shewanella loihica PV-4 0.58 Shew_3812 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein (RefSeq) 0.74 Shew_1138 twitching motility protein (RefSeq) low > 60
Shewanella amazonensis SB2B 0.58 Sama_3633 iron-sulfur cluster-binding protein (RefSeq) 0.75 Sama_2476 twitching motility protein (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.55 MIT1002_00719 cytochrome c oxidase accessory protein CcoG 0.72 MIT1002_03060 Twitching mobility protein low > 70
Pseudomonas sp. S08-1 0.51 OH686_02210 cytochrome c oxidase accessory protein CcoG 0.70 OH686_10970 Twitching motility protein PilT low > 80
Pseudomonas sp. DMC3 0.51 GFF718 hypothetical protein 0.69 GFF208 Twitching mobility protein low > 89
Pseudomonas fluorescens FW300-N2C3 0.50 AO356_02455 (Fe-S)-binding protein 0.69 AO356_13430 twitching motility protein PilT low > 104
Pseudomonas segetis P6 0.50 ACVTMO_RS11490 ccoG cytochrome c oxidase accessory protein CcoG 0.69 ACVTMO_RS03025 pilT type IV pilus twitching motility protein PilT — —
Pseudomonas fluorescens FW300-N2E2 0.50 Pf6N2E2_2316 Type cbb3 cytochrome oxidase biogenesis protein CcoG, involved in Cu oxidation 0.69 Pf6N2E2_4602 Twitching motility protein PilT low > 103
Pseudomonas aeruginosa PA14 0.50 IKLFDK_07410 cytochrome c oxidase accessory protein CcoG 0.69 IKLFDK_23445 type IV pilus twitching motility protein PilT low > 98
Pseudomonas aeruginosa MRSN321 0.50 DY961_RS19380 ccoG;go_function=molecular_function|0003674||IEA;go_process=respiratory cytochrome c oxidase accessory protein CcoG 0.69 DY961_RS21955 pilT;inference=COORDINATES type IV pilus twitching motility protein PilT low > 100
Pseudomonas fluorescens FW300-N2E3 0.50 AO353_00630 (Fe-S)-binding protein 0.68 AO353_08155 twitching motility protein PilT low > 101
Pseudomonas aeruginosa PUPa3 0.50 DQ20_RS53510 ccoG;go_function=molecular_function|0003674||IEA;go_process=respiratory cytochrome c oxidase accessory protein CcoG 0.69 DQ20_RS37345 pilT;inference=COORDINATES type IV pilus twitching motility protein PilT low > 101
Pseudomonas sp. SVBP6 0.50 COO64_RS18670 ccoG cytochrome c oxidase accessory protein CcoG 0.54 COO64_RS13005 type IV pilus twitching motility protein PilT low > 93
Pseudomonas simiae WCS417 0.50 PS417_20750 (Fe-S)-binding protein 0.63 PS417_26720 twitching motility protein PilT — —
Pseudomonas sp. RS175 0.50 PFR28_01085 hypothetical protein 0.69 PFR28_04241 Twitching mobility protein low > 88
Pseudomonas fluorescens SBW25-INTG 0.50 PFLU_RS22360 cytochrome c oxidase accessory protein CcoG 0.64 PFLU_RS28365 type IV pilus twitching motility protein PilT low > 109
Pseudomonas fluorescens SBW25 0.50 PFLU_RS22360 cytochrome c oxidase accessory protein CcoG 0.64 PFLU_RS28365 type IV pilus twitching motility protein PilT low > 109
Pseudomonas stutzeri RCH2 0.50 Psest_2531 cytochrome c oxidase accessory protein FixG 0.69 Psest_0285 pilus retraction protein PilT low > 67
Pseudomonas fluorescens GW456-L13 0.50 PfGW456L13_4065 Type cbb3 cytochrome oxidase biogenesis protein CcoG, involved in Cu oxidation 0.68 PfGW456L13_1012 Twitching motility protein PilT low > 87
Pseudomonas orientalis W4I3 0.50 QF045_RS22555 cytochrome c oxidase accessory protein CcoG 0.64 QF045_RS01120 type IV pilus twitching motility protein PilT low > 93
Pseudomonas lactucae CFBP13502 0.50 GEMAOFIL_04295 hypothetical protein 0.65 GEMAOFIL_05481 Twitching mobility protein low > 96
Pseudomonas sp. BP01 0.49 JOY50_RS00095 ccoG cytochrome c oxidase accessory protein CcoG 0.50 JOY50_RS20915 type IV pilus twitching motility protein PilT low > 84
Pseudomonas putida KT2440 0.49 PP_4259 Iron-sulfur cluster-binding protein 0.50 PP_5093 twitching motility protein low > 96
Marinobacter adhaerens HP15 0.48 HP15_2111 iron-sulfur cluster-binding protein 0.68 HP15_289 twitching motility protein PilT low > 73
Pseudomonas fluorescens FW300-N1B4 0.48 Pf1N1B4_4673 4Fe-4S ferredoxin, iron-sulfur binding 0.69 Pf1N1B4_2343 Twitching motility protein PilT low > 87
Pseudomonas syringae pv. syringae B728a ΔmexB 0.48 Psyr_3419 4Fe-4S ferredoxin, iron-sulfur binding protein 0.67 Psyr_0478 pilus retraction ATPase PilT low > 86
Pseudomonas syringae pv. syringae B728a 0.48 Psyr_3419 4Fe-4S ferredoxin, iron-sulfur binding protein 0.67 Psyr_0478 pilus retraction ATPase PilT low > 86
Kangiella aquimarina DSM 16071 0.45 B158DRAFT_1970 cytochrome c oxidase accessory protein FixG 0.70 B158DRAFT_0195 pilus retraction protein PilT low > 40
Acidovorax sp. GW101-3H11 0.41 Ac3H11_972 Type cbb3 cytochrome oxidase biogenesis protein CcoG, involved in Cu oxidation 0.65 Ac3H11_4473 Twitching motility protein PilT low > 79
Hydrogenophaga sp. GW460-11-11-14-LB1 0.40 GFF4139 Type cbb3 cytochrome oxidase biogenesis protein CcoG, involved in Cu oxidation 0.58 GFF2721 Twitching motility protein PilT low > 90
Variovorax sp. SCN45 0.40 GFF6960 Type cbb3 cytochrome oxidase biogenesis protein CcoG, involved in Cu oxidation 0.67 GFF3743 Twitching motility protein PilT low > 127
Methylophilus sp. DMC18 0.39 GFF1761 hypothetical protein 0.68 GFF865 Twitching mobility protein low > 43
Variovorax sp. OAS795 0.39 ABID97_RS16205 cytochrome c oxidase accessory protein CcoG 0.67 ABID97_RS00255 type IV pilus twitching motility protein PilT low > 91
Herbaspirillum seropedicae SmR1 0.39 HSERO_RS16035 cytochrome C oxidase 0.47 HSERO_RS19000 twitching motility protein PilT low > 78
Dechlorosoma suillum PS 0.39 Dsui_0928 cytochrome c oxidase accessory protein FixG 0.68 Dsui_0604 pilus retraction protein PilT low > 51
Ralstonia sp. UNC404CL21Col 0.38 ABZR87_RS11165 cytochrome c oxidase accessory protein CcoG 0.66 ABZR87_RS01220 type IV pilus twitching motility protein PilT low > 80
Cupriavidus basilensis FW507-4G11 0.38 RR42_RS12890 cytochrome C oxidase 0.64 RR42_RS17350 twitching motility protein PilT low > 128
Lysobacter sp. OAE881 0.38 ABIE51_RS03830 4Fe-4S dicluster domain-containing protein 0.69 ABIE51_RS16055 type IV pilus twitching motility protein PilT low > 62
Ralstonia solanacearum UW163 0.37 UW163_RS13095 cytochrome c oxidase accessory protein CcoG 0.66 UW163_RS08055 type IV pili twitching motility protein PilT — —
Ralstonia solanacearum IBSBF1503 0.37 RALBFv3_RS15635 cytochrome c oxidase accessory protein CcoG 0.66 RALBFv3_RS05570 type IV pili twitching motility protein PilT low > 76
Ralstonia solanacearum GMI1000 0.36 RS_RS06415 cytochrome c oxidase accessory protein CcoG 0.65 RS_RS13430 type IV pili twitching motility protein PilT low > 80
Ralstonia solanacearum PSI07 0.36 RPSI07_RS17720 cytochrome c oxidase accessory protein CcoG 0.65 RPSI07_RS11730 type IV pili twitching motility protein PilT low > 81
Rhodospirillum rubrum S1H 0.30 Rru_A3326 4Fe-4S ferredoxin, iron-sulfur binding (NCBI) 0.31 Rru_A0118 type II secretion system protein E (NCBI) — —

Not shown: 17 genomes with orthologs for CSW01_00180 only; 42 genomes with orthologs for CSW01_02460 only