Conservation of cofitness between CSW01_01115 and CSW01_02270 in Vibrio cholerae E7946 ATCC 55056

61 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_01115 ribonuclease PH 1.0 CSW01_02270 malate dehydrogenase 0.38 19
Dickeya dianthicola 67-19 0.78 HGI48_RS00675 ribonuclease PH 0.79 HGI48_RS03135 malate dehydrogenase low > 71
Dickeya dianthicola ME23 0.78 DZA65_RS00730 ribonuclease PH 0.79 DZA65_RS03130 malate dehydrogenase low > 75
Dickeya dadantii 3937 0.77 DDA3937_RS20540 ribonuclease PH 0.79 DDA3937_RS02970 malate dehydrogenase low > 74
Pectobacterium carotovorum WPP14 0.76 HER17_RS20855 ribonuclease PH 0.80 HER17_RS18390 malate dehydrogenase low > 75
Erwinia amylovora T8 0.75 OLJFJH_05765 ribonuclease PH 0.77 OLJFJH_06980 malate dehydrogenase low > 58
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.74 GFF366 Ribonuclease PH (EC 2.7.7.56) 0.81 GFF2149 Malate dehydrogenase (EC 1.1.1.37) low > 78
Enterobacter sp. TBS_079 0.74 MPMX20_00092 Ribonuclease PH 0.81 MPMX20_04140 Malate dehydrogenase low > 85
Enterobacter asburiae PDN3 0.74 EX28DRAFT_3893 ribonuclease PH 0.81 EX28DRAFT_3285 malate dehydrogenase (NAD) (EC 1.1.1.37) low > 76
Erwinia tracheiphila SCR3 0.73 LU632_RS22020 rph ribonuclease PH 0.79 LU632_RS21365 mdh malate dehydrogenase low > 73
Erwinia tracheiphila HP pepo 2.2 0.73 IJEDHG_07755 rph ribonuclease PH 0.79 IJEDHG_13655 mdh malate dehydrogenase low > 61
Escherichia fergusonii Becca 0.73 EFB2_00170 Ribonuclease PH 0.82 EFB2_00594 Malate dehydrogenase low > 86
Escherichia coli ECOR27 0.73 NOLOHH_07470 rph ribonuclease PH 0.82 NOLOHH_09595 mdh malate dehydrogenase low > 76
Pantoea agglomerans CFBP13505 P0401 0.73 PagCFBP13505_RS18750 ribonuclease PH 0.80 PagCFBP13505_RS11115 malate dehydrogenase low > 74
Klebsiella michiganensis M5al 0.73 BWI76_RS27390 ribonuclease PH 0.81 BWI76_RS25420 malate dehydrogenase low > 92
Escherichia coli ECRC101 0.73 MCAODC_06100 rph ribonuclease PH 0.82 MCAODC_08315 mdh malate dehydrogenase low > 87
Escherichia coli BL21 0.73 ECD_03500 ribonuclease PH 0.82 ECD_03096 malate dehydrogenase, NAD(P)-binding low > 61
Escherichia coli ECOR38 0.73 HEPCGN_14410 rph ribonuclease PH 0.82 HEPCGN_16660 mdh malate dehydrogenase low > 88
Escherichia coli ECRC99 0.73 KEDOAH_12555 rph ribonuclease PH 0.82 KEDOAH_10355 mdh malate dehydrogenase — —
Escherichia coli Nissle 1917 0.73 ECOLIN_RS20755 ribonuclease PH 0.82 ECOLIN_RS18555 malate dehydrogenase low > 55
Serratia liquefaciens MT49 0.73 IAI46_24850 ribonuclease PH 0.79 IAI46_01825 malate dehydrogenase 0.41 64
Escherichia coli ECRC100 0.73 OKFHMN_15590 rph ribonuclease PH 0.82 OKFHMN_17795 mdh malate dehydrogenase low > 79
Escherichia coli ECRC62 0.73 BNILDI_04045 rph ribonuclease PH 0.82 BNILDI_01940 mdh malate dehydrogenase low > 75
Escherichia coli ECRC98 0.73 JDDGAC_19215 rph ribonuclease PH 0.82 JDDGAC_21420 mdh malate dehydrogenase low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.73 OHPLBJKB_00059 Ribonuclease PH 0.82 OHPLBJKB_00468 Malate dehydrogenase low > 74
Escherichia coli ECRC102 0.73 NIAGMN_13350 rph ribonuclease PH 0.82 NIAGMN_15555 mdh malate dehydrogenase low > 80
Pantoea sp. MT58 0.73 IAI47_00595 ribonuclease PH 0.80 IAI47_02520 malate dehydrogenase low > 76
Klebsiella pneumoniae MKP103 0.73 KDGMDA_08055 ribonuclease PH 0.81 KDGMDA_06200 malate dehydrogenase low > 95
Rahnella sp. WP5 0.72 EX31_RS14505 ribonuclease PH 0.79 EX31_RS08645 malate dehydrogenase low > 89
Alteromonas macleodii MIT1002 0.71 MIT1002_04071 Ribonuclease PH 0.69 MIT1002_03492 Malate dehydrogenase — —
Shewanella sp. ANA-3 0.71 Shewana3_3777 RNAse PH (RefSeq) 0.81 Shewana3_3509 malate dehydrogenase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.70 SO4256 rph ribonuclease PH (NCBI ptt file) 0.81 SO0770 mdh malate dehydrogenase (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.70 Shew_3488 ribonuclease PH (RefSeq) 0.79 Shew_0867 malate dehydrogenase (RefSeq) low > 60
Escherichia coli BW25113 0.70 b3643 rph ribonuclease PH (NCBI) 0.82 b3236 mdh malate dehydrogenase (NCBI) low > 76
Shewanella amazonensis SB2B 0.69 Sama_0320 tRNA nucleotidyltransferase (RefSeq) 0.80 Sama_0672 malate dehydrogenase (RefSeq) low > 62
Hydrogenophaga sp. GW460-11-11-14-LB1 0.66 GFF3254 Ribonuclease PH (EC 2.7.7.56) 0.09 GFF3372 Malate dehydrogenase (EC 1.1.1.37) — —
Pseudomonas sp. BP01 0.64 JOY50_RS09025 rph ribonuclease PH 0.12 JOY50_RS27245 malate dehydrogenase low > 84
Variovorax sp. SCN45 0.63 GFF2381 Ribonuclease PH (EC 2.7.7.56) 0.10 GFF3901 Malate dehydrogenase (EC 1.1.1.37) — —
Variovorax sp. OAS795 0.63 ABID97_RS23640 ribonuclease PH 0.10 ABID97_RS08515 malate dehydrogenase — —
Azospirillum brasilense Sp245 0.61 AZOBR_RS02205 ribonuclease PH 0.18 AZOBR_RS14060 malate dehydrogenase — —
Bosea sp. OAE506 0.61 ABIE41_RS03295 ribonuclease PH 0.15 ABIE41_RS08960 malate dehydrogenase — —
Acidovorax sp. GW101-3H11 0.60 Ac3H11_3670 Ribonuclease PH (EC 2.7.7.56) 0.11 Ac3H11_3153 Malate dehydrogenase (EC 1.1.1.37) — —
Rhodopseudomonas palustris CGA009 0.60 TX73_001710 ribonuclease PH 0.14 TX73_000995 malate dehydrogenase — —
Sinorhizobium meliloti 1021 0.60 SMc01144 ribonuclease PH 0.13 SMc02479 malate dehydrogenase — —
Rhodanobacter sp. FW510-T8 0.59 OKGIIK_12150 rph ribonuclease PH 0.09 OKGIIK_06530 mdh malate dehydrogenase — —
Rhodanobacter denitrificans FW104-10B01 0.59 LRK54_RS11745 ribonuclease PH 0.10 LRK54_RS00720 malate dehydrogenase — —
Rhodanobacter denitrificans MT42 0.59 LRK55_RS11470 ribonuclease PH 0.10 LRK55_RS00495 malate dehydrogenase — —
Rhodanobacter sp000427505 FW510-R12 0.59 LRK53_RS16795 ribonuclease PH 0.10 LRK53_RS09435 malate dehydrogenase — —
Azospirillum sp. SherDot2 0.59 MPMX19_02576 Ribonuclease PH 0.17 MPMX19_00107 Malate dehydrogenase — —
Agrobacterium fabrum C58 0.59 Atu0327 ribonuclease PH 0.14 Atu2639 putative malate dehydrogenase — —
Rhizobium sp. OAE497 0.59 ABIE40_RS01640 ribonuclease PH 0.14 ABIE40_RS18000 malate dehydrogenase — —
Rhodospirillum rubrum S1H 0.57 Rru_A3641 Ribonuclease PH (NCBI) 0.17 Rru_A1210 Malate dehydrogenase, NAD-dependent (NCBI) — —
Xanthobacter sp. DMC5 0.57 GFF1893 Ribonuclease PH 0.14 GFF4411 Malate dehydrogenase — —
Magnetospirillum magneticum AMB-1 0.55 AMB_RS22760 ribonuclease PH 0.17 AMB_RS20025 malate dehydrogenase — —
Caulobacter crescentus NA1000 Δfur 0.54 CCNA_00151 ribonuclease PH 0.13 CCNA_03770 malate dehydrogenase — —
Caulobacter crescentus NA1000 0.54 CCNA_00151 ribonuclease PH 0.13 CCNA_03770 malate dehydrogenase — —
Dinoroseobacter shibae DFL-12 0.54 Dshi_3463 ribonuclease PH (RefSeq) 0.17 Dshi_2876 malate dehydrogenase, NAD-dependent (RefSeq) — —
Brevundimonas sp. GW460-12-10-14-LB2 0.54 A4249_RS13125 ribonuclease PH 0.14 A4249_RS12675 malate dehydrogenase — —
Bifidobacterium breve UCC2003 0.52 BBR_RS12405 ribonuclease PH 0.10 BBR_RS16995 L-lactate dehydrogenase — —
Phaeobacter inhibens DSM 17395 0.52 PGA1_c35030 ribonuclease PH 0.16 PGA1_c03650 malate dehydrogenase Mdh — —
Sphingobium sp. HT1-2 0.52 GFF2617 Ribonuclease PH (EC 2.7.7.56) 0.16 GFF2450 Malate dehydrogenase (EC 1.1.1.37) — —
Sphingomonas koreensis DSMZ 15582 0.50 Ga0059261_2741 ribonuclease PH 0.15 Ga0059261_1338 malate dehydrogenase (NAD) (EC 1.1.1.37) — —

Not shown: 45 genomes with orthologs for CSW01_01115 only; 12 genomes with orthologs for CSW01_02270 only