Conservation of cofitness between CSW01_01115 and CSW01_02270 in Vibrio cholerae E7946 ATCC 55056

35 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_01115 ribonuclease PH 1.0 CSW01_02270 malate dehydrogenase 0.38 19
Dickeya dianthicola ME23 0.78 DZA65_RS00730 ribonuclease PH 0.79 DZA65_RS03130 malate dehydrogenase low > 75
Dickeya dianthicola 67-19 0.78 HGI48_RS00675 ribonuclease PH 0.79 HGI48_RS03135 malate dehydrogenase low > 71
Dickeya dadantii 3937 0.77 DDA3937_RS20540 ribonuclease PH 0.79 DDA3937_RS02970 malate dehydrogenase low > 74
Pectobacterium carotovorum WPP14 0.76 HER17_RS20855 ribonuclease PH 0.80 HER17_RS18390 malate dehydrogenase low > 75
Erwinia amylovora T8 0.75 OLJFJH_05765 ribonuclease PH 0.77 OLJFJH_06980 malate dehydrogenase low > 58
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.74 GFF366 Ribonuclease PH (EC 2.7.7.56) 0.81 GFF2149 Malate dehydrogenase (EC 1.1.1.37) low > 78
Enterobacter sp. TBS_079 0.74 MPMX20_00092 Ribonuclease PH 0.81 MPMX20_04140 Malate dehydrogenase low > 85
Enterobacter asburiae PDN3 0.74 EX28DRAFT_3893 ribonuclease PH 0.81 EX28DRAFT_3285 malate dehydrogenase (NAD) (EC 1.1.1.37) low > 76
Erwinia tracheiphila HP pepo 2.2 0.73 IJEDHG_07755 rph ribonuclease PH 0.79 IJEDHG_13655 mdh malate dehydrogenase low > 61
Erwinia tracheiphila SCR3 0.73 LU632_RS22020 rph ribonuclease PH 0.79 LU632_RS21365 mdh malate dehydrogenase low > 73
Escherichia coli HS(pFamp)R (ATCC 700891) 0.73 OHPLBJKB_00059 Ribonuclease PH 0.82 OHPLBJKB_00468 Malate dehydrogenase low > 74
Escherichia coli ECRC99 0.73 KEDOAH_12555 rph ribonuclease PH 0.82 KEDOAH_10355 mdh malate dehydrogenase — —
Pantoea sp. MT58 0.73 IAI47_00595 ribonuclease PH 0.80 IAI47_02520 malate dehydrogenase low > 76
Escherichia coli ECRC98 0.73 JDDGAC_19215 rph ribonuclease PH 0.82 JDDGAC_21420 mdh malate dehydrogenase low > 87
Escherichia coli ECRC100 0.73 OKFHMN_15590 rph ribonuclease PH 0.82 OKFHMN_17795 mdh malate dehydrogenase low > 79
Serratia liquefaciens MT49 0.73 IAI46_24850 ribonuclease PH 0.79 IAI46_01825 malate dehydrogenase 0.40 58
Escherichia coli ECRC102 0.73 NIAGMN_13350 rph ribonuclease PH 0.82 NIAGMN_15555 mdh malate dehydrogenase low > 80
Escherichia coli Nissle 1917 0.73 ECOLIN_RS20755 ribonuclease PH 0.82 ECOLIN_RS18555 malate dehydrogenase low > 55
Escherichia coli ECRC62 0.73 BNILDI_04045 rph ribonuclease PH 0.82 BNILDI_01940 mdh malate dehydrogenase low > 75
Escherichia coli ECOR38 0.73 HEPCGN_14410 rph ribonuclease PH 0.82 HEPCGN_16660 mdh malate dehydrogenase low > 88
Escherichia coli BL21 0.73 ECD_03500 ribonuclease PH 0.82 ECD_03096 malate dehydrogenase, NAD(P)-binding low > 61
Escherichia coli ECRC101 0.73 MCAODC_06100 rph ribonuclease PH 0.82 MCAODC_08315 mdh malate dehydrogenase low > 87
Escherichia coli ECOR27 0.73 NOLOHH_07470 rph ribonuclease PH 0.82 NOLOHH_09595 mdh malate dehydrogenase 0.27 2
Klebsiella michiganensis M5al 0.73 BWI76_RS27390 ribonuclease PH 0.81 BWI76_RS25420 malate dehydrogenase low > 92
Escherichia fergusonii Becca 0.73 EFB2_00170 Ribonuclease PH 0.82 EFB2_00594 Malate dehydrogenase low > 86
Pantoea agglomerans CFBP13505 P0401 0.73 PagCFBP13516_RS00585 rph ribonuclease PH 0.80 PagCFBP13516_RS02535 mdh malate dehydrogenase low > 80
Klebsiella pneumoniae MRSN742743 0.73 GJGHJB_00129 rph ribonuclease PH 0.81 GJGHJB_00472 mdh malate dehydrogenase low > 83
Klebsiella pneumoniae MKP103 0.73 KDGMDA_08055 ribonuclease PH 0.81 KDGMDA_06200 malate dehydrogenase low > 94
Rahnella sp. WP5 0.72 EX31_RS14505 ribonuclease PH 0.79 EX31_RS08645 malate dehydrogenase low > 89
Shewanella sp. ANA-3 0.71 Shewana3_3777 RNAse PH (RefSeq) 0.81 Shewana3_3509 malate dehydrogenase (RefSeq) low > 73
Alteromonas macleodii MIT1002 0.71 MIT1002_04071 Ribonuclease PH 0.69 MIT1002_03492 Malate dehydrogenase — —
Shewanella oneidensis MR-1 0.70 SO4256 rph ribonuclease PH (NCBI ptt file) 0.81 SO0770 mdh malate dehydrogenase (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.70 Shew_3488 ribonuclease PH (RefSeq) 0.79 Shew_0867 malate dehydrogenase (RefSeq) low > 60
Escherichia coli BW25113 0.70 b3643 rph ribonuclease PH (NCBI) 0.82 b3236 mdh malate dehydrogenase (NCBI) low > 76
Shewanella amazonensis SB2B 0.69 Sama_0320 tRNA nucleotidyltransferase (RefSeq) 0.80 Sama_0672 malate dehydrogenase (RefSeq) low > 62

Not shown: 73 genomes with orthologs for CSW01_01115 only; 0 genomes with orthologs for CSW01_02270 only