Conservation of cofitness between CSW01_03705 and CSW01_02070 in Vibrio cholerae E7946 ATCC 55056

45 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_03705 chaperone protein ClpB 1.0 CSW01_02070 alanine--glyoxylate aminotransferase family protein 0.51 11
Shewanella amazonensis SB2B 0.80 Sama_2603 clpB protein (RefSeq) 0.75 Sama_3277 Serine--pyruvate transaminase (RefSeq) low > 62
Shewanella oneidensis MR-1 0.80 SO3577 clpB clpB protein (NCBI ptt file) 0.75 SO4343 aminotransferase, class V (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.80 Shewana3_3169 ATPase (RefSeq) 0.74 Shewana3_0360 alanine-glyoxylate aminotransferase (RefSeq) low > 73
Shewanella loihica PV-4 0.80 Shew_2948 ATPase (RefSeq) 0.75 Shew_0294 alanine--glyoxylate transaminase (RefSeq) low > 60
Alteromonas macleodii MIT1002 0.78 MIT1002_02677 Heat shock protein F84.1 0.66 MIT1002_02020 Purine catabolism protein PucG low > 70
Enterobacter asburiae PDN3 0.78 EX28DRAFT_2693 ATP-dependent chaperone ClpB 0.32 EX28DRAFT_1934 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase low > 76
Enterobacter sp. TBS_079 0.78 MPMX20_03461 Chaperone protein ClpB 0.32 MPMX20_01672 (S)-ureidoglycine--glyoxylate transaminase low > 85
Dickeya dianthicola ME23 0.78 DZA65_RS17320 ATP-dependent chaperone ClpB 0.31 DZA65_RS17800 alanine--glyoxylate aminotransferase family protein low > 75
Klebsiella pneumoniae MKP103 0.78 KDGMDA_02125 ATP-dependent chaperone ClpB 0.33 KDGMDA_22255 aminotransferase low > 95
Klebsiella michiganensis M5al 0.78 BWI76_RS21440 ATP-dependent chaperone ClpB 0.32 BWI76_RS10590 class V aminotransferase low > 92
Dickeya dianthicola 67-19 0.78 HGI48_RS16225 ATP-dependent chaperone ClpB 0.31 HGI48_RS16710 alanine--glyoxylate aminotransferase family protein low > 71
Pectobacterium carotovorum WPP14 0.77 HER17_RS05410 ATP-dependent chaperone ClpB 0.31 HER17_RS04560 alanine--glyoxylate aminotransferase family protein low > 75
Dickeya dadantii 3937 0.77 DDA3937_RS16100 ATP-dependent chaperone ClpB 0.31 DDA3937_RS16640 alanine--glyoxylate aminotransferase family protein low > 74
Serratia liquefaciens MT49 0.77 IAI46_03995 ATP-dependent chaperone ClpB 0.31 IAI46_04270 alanine--glyoxylate aminotransferase family protein low > 86
Pantoea agglomerans CFBP13505 P0401 0.77 PagCFBP13505_RS16530 ATP-dependent chaperone ClpB 0.31 PagCFBP13505_RS09905 alanine--glyoxylate aminotransferase family protein low > 74
Pantoea sp. MT58 0.77 IAI47_04435 ATP-dependent chaperone ClpB 0.31 IAI47_15250 alanine--glyoxylate aminotransferase family protein low > 76
Rahnella sp. WP5 0.76 EX31_RS07560 ATP-dependent chaperone ClpB 0.32 EX31_RS21100 alanine--glyoxylate aminotransferase family protein low > 89
Erwinia amylovora T8 0.76 OLJFJH_09740 ATP-dependent chaperone ClpB 0.31 OLJFJH_18530 aminotransferase low > 58
Pseudomonas sp. S08-1 0.71 OH686_16420 ATP-dependent chaperone protein ClpB 0.08 OH686_15980 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase low > 80
Xanthomonas campestris pv. campestris strain 8004 0.70 Xcc-8004.1382.1 ClpB protein 0.30 Xcc-8004.363.1 Serine--pyruvate aminotransferase (EC 2.6.1.51) / L-alanine:glyoxylate aminotransferase (EC 2.6.1.44) low > 74
Pseudomonas segetis P6 0.70 MPMX49_03920 Chaperone protein ClpB 0.08 MPMX49_01450 2-aminoethylphosphonate--pyruvate transaminase 0.47 7
Paraburkholderia bryophila 376MFSha3.1 0.67 H281DRAFT_00817 ATP-dependent Clp protease ATP-binding subunit ClpB 0.25 H281DRAFT_04750 aspartate aminotransferase low > 103
Paraburkholderia graminis OAS925 0.67 ABIE53_002033 ATP-dependent Clp protease ATP-binding subunit ClpB 0.25 ABIE53_000912 alanine-glyoxylate transaminase/serine-glyoxylate transaminase/serine-pyruvate transaminase low > 113
Paraburkholderia sabiae LMG 24235 0.67 QEN71_RS22370 ATP-dependent chaperone ClpB 0.24 QEN71_RS26100 aminotransferase class V-fold PLP-dependent enzyme low > 153
Burkholderia phytofirmans PsJN 0.67 BPHYT_RS08990 protein disaggregation chaperone 0.26 BPHYT_RS03855 alanine--glyoxylate aminotransferase low > 109
Cupriavidus basilensis FW507-4G11 0.65 RR42_RS12455 protein disaggregation chaperone 0.19 RR42_RS30400 serine--glyoxylate aminotransferase low > 128
Acidovorax sp. GW101-3H11 0.65 Ac3H11_1474 ClpB protein 0.09 Ac3H11_4480 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase low > 79
Hydrogenophaga sp. GW460-11-11-14-LB1 0.64 GFF3942 ClpB protein 0.08 GFF757 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase low > 90
Variovorax sp. SCN45 0.63 GFF2792 Chaperone protein ClpB (ATP-dependent unfoldase) 0.19 GFF1369 Serine--glyoxylate aminotransferase (EC 2.6.1.45) low > 127
Variovorax sp. OAS795 0.63 ABID97_RS10930 ATP-dependent chaperone ClpB 0.19 ABID97_RS15840 aminotransferase class V-fold PLP-dependent enzyme low > 91
Agrobacterium fabrum C58 0.56 Atu4177 ATP-dependent Clp protease, ATP-binding subunit 0.15 Atu3217 aspartate aminotransferase low > 89
Bosea sp. OAE506 0.56 ABIE41_RS23785 ATP-dependent chaperone ClpB 0.20 ABIE41_RS15105 aminotransferase class V-fold PLP-dependent enzyme low > 77
Caulobacter crescentus NA1000 0.56 CCNA_00922 ClpB protein 0.31 CCNA_02687 serine-pyruvate aminotransferase low > 66
Caulobacter crescentus NA1000 Δfur 0.56 CCNA_00922 ClpB protein 0.31 CCNA_02687 serine-pyruvate aminotransferase low > 67
Rhodospirillum rubrum S1H 0.56 Rru_A0753 Chaperone clpB (NCBI) 0.18 Rru_A2010 Aminotransferase, class V (NCBI) low > 58
Rhodopseudomonas palustris CGA009 0.56 TX73_023005 ATP-dependent chaperone ClpB 0.18 TX73_004070 aminotransferase class V-fold PLP-dependent enzyme low > 86
Synechocystis sp000284455 PCC 6803 0.55 SGL_RS11615 ATP-dependent chaperone ClpB 0.24 SGL_RS11200 alanine--glyoxylate aminotransferase family protein — —
Sinorhizobium meliloti 1021 0.55 SMc02433 ATP-dependent protease 0.58 SMa1495 aminotransferase low > 103
Synechococcus elongatus PCC 7942 0.55 Synpcc7942_1089 clpB ATPase 0.44 Synpcc7942_2160 nhtA alanine-glyoxylate aminotransferase low > 38
Dinoroseobacter shibae DFL-12 0.55 Dshi_0617 ATPase AAA-2 domain protein (RefSeq) 0.22 Dshi_0887 Serine--glyoxylate transaminase (RefSeq) low > 64
Magnetospirillum magneticum AMB-1 0.55 AMB_RS07865 ATP-dependent chaperone ClpB 0.64 AMB_RS22510 alanine--glyoxylate aminotransferase family protein low > 64
Desulfovibrio vulgaris Miyazaki F 0.54 DvMF_0567 ATP-dependent chaperone ClpB (RefSeq) 0.20 DvMF_1715 aminotransferase class V (RefSeq) — —
Desulfovibrio vulgaris Hildenborough JW710 0.54 DVU1874 clpB ATP-dependent Clp protease, ATP-binding subunit ClpB (TIGR) 0.39 DVU3121 aminotransferase, class V (TIGR) low > 55
Pontibacter actiniarum KMM 6156, DSM 19842 0.52 CA264_14135 ATP-dependent chaperone ClpB 0.08 CA264_00840 phosphoserine aminotransferase — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.50 Echvi_0754 ATP-dependent chaperone ClpB 0.08 Echvi_1811 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase — —

Not shown: 73 genomes with orthologs for CSW01_03705 only; 2 genomes with orthologs for CSW01_02070 only