Conservation of cofitness between CSW01_08135 and CSW01_01980 in Vibrio cholerae E7946 ATCC 55056

63 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_08135 MFS transporter 1.0 CSW01_01980 transcriptional regulator Zur 0.64 15
Xanthomonas campestris pv. campestris strain 8004 0.25 Xcc-8004.387.1 Permeases of the major facilitator superfamily 0.36 Xcc-8004.1790.1 Zinc uptake regulation protein ZUR low > 74
Pseudomonas aeruginosa MRSN321 0.24 DY961_RS10970 MFS transporter 0.33 DY961_RS25795 zur;inference=COORDINATES zinc uptake transcriptional repressor Zur low > 100
Pseudomonas aeruginosa PA14 0.24 IKLFDK_28385 MFS transporter 0.33 IKLFDK_25915 zinc uptake transcriptional repressor Zur low > 98
Pseudomonas aeruginosa PUPa3 0.24 DQ20_RS51105 MFS transporter 0.33 DQ20_RS58225 zur;inference=COORDINATES zinc uptake transcriptional repressor Zur low > 101
Pseudomonas fluorescens FW300-N2C3 0.24 AO356_09295 hypothetical protein 0.33 AO356_11485 Fur family transcriptional regulator — —
Serratia liquefaciens MT49 0.24 IAI46_11675 MFS transporter 0.45 IAI46_22990 zinc uptake transcriptional repressor Zur low > 87
Klebsiella michiganensis M5al 0.24 BWI76_RS15965 MFS transporter 0.44 BWI76_RS01890 transcriptional regulator Zur low > 92
Pseudomonas fluorescens FW300-N2E3 0.24 AO353_12595 hypothetical protein 0.32 AO353_10910 Fur family transcriptional regulator — —
Pseudomonas fluorescens GW456-L13 0.24 PfGW456L13_256 Permeases of the major facilitator superfamily 0.33 PfGW456L13_598 Zinc uptake regulation protein ZUR 0.35 9
Klebsiella pneumoniae MKP103 0.24 KDGMDA_21220 MFS transporter 0.44 KDGMDA_10345 zinc uptake transcriptional repressor Zur low > 95
Pseudomonas fluorescens FW300-N2E2 0.24 Pf6N2E2_3736 Permeases of the major facilitator superfamily 0.34 Pf6N2E2_4166 Zinc uptake regulation protein ZUR — —
Pseudomonas sp. RS175 0.24 PFR28_05018 Inner membrane transport protein YnfM 0.34 PFR28_04620 Zinc uptake regulation protein low > 88
Pseudomonas fluorescens FW300-N1B4 0.24 Pf1N1B4_1531 Permeases of the major facilitator superfamily 0.32 Pf1N1B4_1871 Zinc uptake regulation protein ZUR low > 87
Escherichia coli ECOR27 0.23 NOLOHH_18235 araJ MFS transporter 0.45 NOLOHH_05205 zur zinc uptake transcriptional repressor Zur low > 76
Pseudomonas sp. BP01 0.23 JOY50_RS09340 MFS transporter 0.33 JOY50_RS21130 zur zinc uptake transcriptional repressor Zur low > 84
Escherichia coli ECRC98 0.23 JDDGAC_02320 ynfM Inner membrane transport protein YnfM 0.45 JDDGAC_16675 zur zinc uptake transcriptional repressor Zur low > 87
Escherichia coli ECOR38 0.23 HEPCGN_06105 ynfM Inner membrane transport protein YnfM 0.45 HEPCGN_11570 zur zinc uptake transcriptional repressor Zur low > 88
Escherichia coli ECRC62 0.23 BNILDI_17025 ynfM Inner membrane transport protein YnfM 0.45 BNILDI_06315 zur zinc uptake transcriptional repressor Zur low > 75
Escherichia coli BW25113 0.23 b1596 ynfM predicted transporter (NCBI) 0.45 b4046 yjbK putative regulator (VIMSS) low > 76
Escherichia coli ECRC102 0.23 NIAGMN_00345 ynfM Inner membrane transport protein YnfM 0.45 NIAGMN_10800 zur zinc uptake transcriptional repressor Zur low > 80
Escherichia coli BL21 0.23 ECD_01565 putative arabinose efflux transporter 0.45 ECD_03918 transcriptional repressor, Zn(II)-binding low > 61
Escherichia coli ECRC100 0.23 OKFHMN_27730 ynfM Inner membrane transport protein YnfM 0.45 OKFHMN_13050 zur zinc uptake transcriptional repressor Zur low > 79
Escherichia coli ECRC101 0.23 MCAODC_17680 ynfM Inner membrane transport protein YnfM 0.45 MCAODC_03550 zur zinc uptake transcriptional repressor Zur low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.23 OHPLBJKB_02130 Inner membrane transport protein YnfM 0.45 OHPLBJKB_03997 Zinc uptake regulation protein low > 74
Escherichia coli Nissle 1917 0.23 ECOLIN_RS08915 MFS transporter 0.45 ECOLIN_RS23350 zinc uptake transcriptional repressor Zur low > 55
Pseudomonas simiae WCS417 0.23 PS417_02015 membrane protein 0.32 PS417_00385 Fur family transcriptional regulator low > 88
Escherichia fergusonii Becca 0.23 EFB2_02396 Inner membrane transport protein YnfM 0.45 EFB2_04557 Zinc uptake regulation protein low > 86
Acinetobacter radioresistens SK82 0.23 MPMX26_00126 Inner membrane transport protein YnfM 0.31 MPMX26_00095 Zinc uptake regulation protein — —
Escherichia coli ECRC99 0.23 KEDOAH_00375 araJ MFS transporter 0.45 KEDOAH_15110 zur zinc uptake transcriptional repressor Zur — —
Pseudomonas fluorescens SBW25 0.23 PFLU_RS02060 MFS transporter 0.32 PFLU_RS00375 transcriptional repressor low > 109
Pseudomonas putida KT2440 0.23 PP_5072 efflux transporter 0.33 PP_0119 putative zinc uptake regulation protein ZUR low > 96
Pseudomonas fluorescens SBW25-INTG 0.23 PFLU_RS02060 MFS transporter 0.32 PFLU_RS00375 transcriptional repressor — —
Pectobacterium carotovorum WPP14 0.23 HER17_RS10745 MFS transporter 0.48 HER17_RS18780 zinc uptake transcriptional repressor Zur low > 75
Enterobacter sp. TBS_079 0.23 MPMX20_02061 Inner membrane transport protein YnfM 0.45 MPMX20_00262 Zinc uptake regulation protein low > 85
Rahnella sp. WP5 0.23 EX31_RS16995 MFS transporter 0.46 EX31_RS11860 zinc uptake transcriptional repressor Zur low > 89
Paraburkholderia sabiae LMG 24235 0.23 QEN71_RS32385 MFS transporter 0.39 QEN71_RS02580 Fur family transcriptional regulator low > 153
Pseudomonas sp. SVBP6 0.23 COO64_RS13105 MFS transporter 0.33 COO64_RS02455 zur zinc uptake transcriptional repressor Zur — —
Pseudomonas orientalis W4I3 0.23 QF045_RS05075 MFS transporter 0.33 QF045_RS03330 zinc uptake transcriptional repressor Zur low > 93
Pseudomonas sp. DMC3 0.23 GFF3107 Inner membrane transport protein YnfM 0.32 GFF635 Zinc uptake regulation protein low > 89
Pantoea agglomerans CFBP13505 P0401 0.22 PagCFBP13505_RS06415 MFS transporter 0.47 PagCFBP13505_RS21200 zinc uptake transcriptional repressor Zur low > 74
Rhizobium sp. OAE497 0.22 ABIE40_RS01535 MFS transporter 0.24 ABIE40_RS10935 Fur family transcriptional regulator low > 107
Pseudomonas lactucae CFBP13502 0.22 GEMAOFIL_00635 Inner membrane transport protein YnfM 0.31 GEMAOFIL_00280 Zinc uptake regulation protein — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.22 Psyr_0420 General substrate transporter:Major facilitator superfamily 0.31 Psyr_0276 zinc uptake regulation protein, putative low > 86
Pseudomonas syringae pv. syringae B728a 0.22 Psyr_0420 General substrate transporter:Major facilitator superfamily 0.31 Psyr_0276 zinc uptake regulation protein, putative low > 86
Pantoea sp. MT58 0.22 IAI47_09740 MFS transporter 0.46 IAI47_17875 zinc uptake transcriptional repressor Zur low > 76
Enterobacter asburiae PDN3 0.22 EX28DRAFT_1495 Arabinose efflux permease 0.46 EX28DRAFT_4266 Fe2+/Zn2+ uptake regulation proteins low > 76
Paraburkholderia bryophila 376MFSha3.1 0.21 H281DRAFT_02192 MFS transporter, YNFM family, putative membrane transport protein 0.37 H281DRAFT_04161 ferric uptake regulator, Fur family low > 103
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.21 GFF1787 Permeases of the major facilitator superfamily 0.45 GFF1416 Zinc uptake regulation protein ZUR low > 78
Erwinia amylovora T8 0.21 OLJFJH_14285 MFS transporter 0.45 OLJFJH_03565 zinc uptake transcriptional repressor Zur low > 58
Pseudomonas stutzeri RCH2 0.21 Psest_3708 Arabinose efflux permease 0.31 Psest_4308 Fe2+/Zn2+ uptake regulation proteins — —
Burkholderia phytofirmans PsJN 0.21 BPHYT_RS01705 MFS transporter 0.38 BPHYT_RS16125 Fur family transcriptional regulator low > 109
Dickeya dadantii 3937 0.20 DDA3937_RS10665 MFS transporter 0.46 DDA3937_RS02765 zinc uptake transcriptional repressor Zur low > 74
Azospirillum brasilense Sp245 0.20 AZOBR_RS10210 membrane protein 0.38 AZOBR_RS09280 Fur family transcriptional regulator low > 97
Dickeya dianthicola 67-19 0.20 HGI48_RS10665 MFS transporter 0.45 HGI48_RS02740 zinc uptake transcriptional repressor Zur low > 71
Acinetobacter baumannii LAC-4 0.19 RR41_RS01155 MFS transporter 0.31 RR41_RS18180 transcriptional repressor low > 55
Dickeya dianthicola ME23 0.19 DZA65_RS11135 MFS transporter 0.45 DZA65_RS02895 zinc uptake transcriptional repressor Zur low > 75
Azospirillum sp. SherDot2 0.19 MPMX19_01172 Inner membrane transport protein YnfM 0.35 MPMX19_01585 Zinc uptake regulation protein low > 112
Dyella japonica UNC79MFTsu3.2 0.18 ABZR86_RS07785 MFS transporter 0.37 ABZR86_RS07900 transcriptional repressor low > 74
Pseudomonas segetis P6 0.18 MPMX49_01797 Inner membrane transport protein YnfM 0.32 MPMX49_00325 Zinc uptake regulation protein low > 75
Rhodanobacter denitrificans FW104-10B01 0.17 LRK54_RS16275 MFS transporter 0.38 LRK54_RS01640 transcriptional repressor low > 59
Rhodanobacter denitrificans MT42 0.17 LRK55_RS16025 MFS transporter 0.38 LRK55_RS01420 transcriptional repressor low > 63
Castellaniella sp019104865 MT123 0.13 ABCV34_RS01130 MFS transporter 0.34 ABCV34_RS13430 Fur family transcriptional regulator low > 48
Sinorhizobium meliloti 1021 0.06 SMa1959 hypothetical protein 0.23 SMc04242 zinc uptake regulation protein low > 103

Not shown: 20 genomes with orthologs for CSW01_08135 only; 15 genomes with orthologs for CSW01_01980 only