Conservation of cofitness between CSW01_10535 and CSW01_01275 in Vibrio cholerae E7946 ATCC 55056

62 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_10535 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC 1.0 CSW01_01275 phosphomannomutase/phosphoglucomutase 0.76 6
Rahnella sp. WP5 0.50 EX31_RS19660 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC 0.67 EX31_RS02875 phosphomannomutase CpsG low > 89
Dickeya dianthicola ME23 0.49 DZA65_RS15420 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC 0.69 DZA65_RS19725 phosphomannomutase/phosphoglucomutase low > 75
Escherichia coli ECOR27 0.49 NOLOHH_14275 mnmC bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC 0.68 NOLOHH_15700 cpsG colanic acid biosynthesis phosphomannomutase CpsG low > 76
Escherichia coli Nissle 1917 0.49 ECOLIN_RS13465 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC 0.68 ECOLIN_RS12070 colanic acid biosynthesis phosphomannomutase CpsG low > 55
Escherichia fergusonii Becca 0.49 EFB2_01534 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC 0.68 EFB2_01806 Phosphomannomutase/phosphoglucomutase low > 86
Escherichia coli BW25113 0.49 b2324 b2324 putative peptidase (VIMSS) 0.68 b2048 cpsG phosphomannomutase (NCBI) low > 76
Dickeya dianthicola 67-19 0.49 HGI48_RS14485 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC 0.69 HGI48_RS18590 phosphomannomutase CpsG low > 71
Escherichia coli HS(pFamp)R (ATCC 700891) 0.49 OHPLBJKB_01381 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC 0.69 OHPLBJKB_01667 Phosphomannomutase/phosphoglucomutase low > 74
Escherichia coli ECRC62 0.49 BNILDI_13195 mnmC bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC 0.68 BNILDI_14615 cpsG colanic acid biosynthesis phosphomannomutase CpsG low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.49 GFF1945 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61) / FAD-dependent cmnm(5)s(2)U34 oxidoreductase 0.66 GFF3880 Phosphomannomutase (EC 5.4.2.8) low > 78
Pectobacterium carotovorum WPP14 0.49 HER17_RS06960 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC 0.68 HER17_RS14515 phosphomannomutase CpsG low > 75
Escherichia coli BL21 0.49 ECD_02249 fused 5-methylaminomethyl-2-thiouridine-forming enzyme methyltransferase and FAD-dependent demodification enzyme 0.68 ECD_01954 phosphomannomutase low > 61
Serratia liquefaciens MT49 0.49 IAI46_18000 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC 0.71 IAI46_08075 phosphomannomutase CpsG low > 86
Escherichia coli ECOR38 0.49 HEPCGN_21845 mnmC bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC 0.68 HEPCGN_03070 cpsG colanic acid biosynthesis phosphomannomutase CpsG low > 88
Dickeya dadantii 3937 0.48 DDA3937_RS14515 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC 0.69 DDA3937_RS18660 phosphomannomutase/phosphoglucomutase low > 74
Escherichia coli ECRC99 0.48 KEDOAH_05555 mnmC bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC 0.68 KEDOAH_03780 cpsG colanic acid biosynthesis phosphomannomutase CpsG — —
Escherichia coli ECRC100 0.48 OKFHMN_22640 mnmC bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC 0.68 OKFHMN_24370 cpsG colanic acid biosynthesis phosphomannomutase CpsG low > 79
Escherichia coli ECRC101 0.48 MCAODC_13680 mnmC bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC 0.68 MCAODC_20570 cpsG colanic acid biosynthesis phosphomannomutase CpsG low > 88
Escherichia coli ECRC98 0.48 JDDGAC_26600 mnmC bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC 0.68 JDDGAC_28480 cpsG colanic acid biosynthesis phosphomannomutase CpsG low > 87
Enterobacter asburiae PDN3 0.48 EX28DRAFT_0280 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain 0.68 EX28DRAFT_0507 Phosphomannomutase low > 76
Escherichia coli ECRC102 0.48 NIAGMN_20415 mnmC bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC 0.68 NIAGMN_22315 cpsG colanic acid biosynthesis phosphomannomutase CpsG — —
Enterobacter sp. TBS_079 0.48 MPMX20_03259 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC 0.68 MPMX20_03030 Phosphomannomutase/phosphoglucomutase low > 85
Pantoea agglomerans CFBP13505 P0401 0.45 PagCFBP13505_RS00130 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC 0.71 PagCFBP13505_RS01110 phosphomannomutase CpsG low > 74
Alteromonas macleodii MIT1002 0.30 MIT1002_02542 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC 0.59 MIT1002_01940 Phosphomannomutase/phosphoglucomutase 0.73 70
Pseudomonas sp. BP01 0.29 JOY50_RS16225 mnmC bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC 0.54 JOY50_RS15915 phosphomannomutase low > 84
Pseudomonas sp. DMC3 0.29 GFF4698 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC 0.22 GFF406 Phosphomannomutase/phosphoglucomutase low > 89
Pseudomonas syringae pv. syringae B728a 0.29 Psyr_3742 FAD dependent oxidoreductase:Protein of unknown function DUF752 0.24 Psyr_0219 phosphomannomutase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.29 Psyr_3742 FAD dependent oxidoreductase:Protein of unknown function DUF752 0.24 Psyr_0219 phosphomannomutase low > 86
Pseudomonas fluorescens GW456-L13 0.28 PfGW456L13_2155 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61) / FAD-dependent cmnm(5)s(2)U34 oxidoreductase 0.23 PfGW456L13_794 Phosphomannomutase (EC 5.4.2.8) / Phosphoglucomutase (EC 5.4.2.2) low > 87
Pseudomonas simiae WCS417 0.28 PS417_19225 FAD-dependent cmnm(5)s(2)U34 oxidoreductase 0.23 PS417_27785 phosphoglucomutase low > 88
Pseudomonas lactucae CFBP13502 0.28 GEMAOFIL_02096 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC 0.23 GEMAOFIL_00025 Phosphomannomutase/phosphoglucomutase low > 93
Pseudomonas fluorescens FW300-N2E3 0.28 AO353_02165 FAD-dependent cmnm(5)s(2)U34 oxidoreductase 0.23 AO353_09235 phosphoglucomutase low > 101
Pseudomonas fluorescens FW300-N1B4 0.28 Pf1N1B4_373 5-methylaminomethyl-2-thiouridine-forming enzyme mnmC 0.23 Pf1N1B4_2122 Phosphomannomutase (EC 5.4.2.8) / Phosphoglucomutase (EC 5.4.2.2) low > 87
Pseudomonas fluorescens FW300-N2E2 0.28 Pf6N2E2_2541 5-methylaminomethyl-2-thiouridine-forming enzyme mnmC 0.22 Pf6N2E2_4374 Phosphomannomutase (EC 5.4.2.8) / Phosphoglucomutase (EC 5.4.2.2) low > 103
Pseudomonas fluorescens FW300-N2C3 0.28 AO356_03570 FAD-dependent cmnm(5)s(2)U34 oxidoreductase 0.22 AO356_12530 phosphoglucomutase low > 104
Pseudomonas putida KT2440 0.28 PP_1751 methyltransferase/FAD-dependent oxidoreductase 0.54 PP_1777 phosphomannomutase low > 96
Pseudomonas sp. SVBP6 0.28 COO64_RS06835 mnmC bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC 0.52 COO64_RS06650 phosphomannomutase low > 93
Pseudomonas sp. RS175 0.28 PFR28_00884 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC 0.23 PFR28_04415 Phosphomannomutase/phosphoglucomutase low > 88
Pseudomonas fluorescens SBW25-INTG 0.27 PFLU_RS21190 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC 0.23 PFLU_RS29465 phosphomannomutase/phosphoglucomutase low > 109
Pseudomonas fluorescens SBW25 0.27 PFLU_RS21190 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC 0.23 PFLU_RS29465 phosphomannomutase/phosphoglucomutase low > 109
Marinobacter adhaerens HP15 0.24 HP15_1540 protein YfcK 0.54 HP15_209 phosphomannomutase low > 73
Paraburkholderia bryophila 376MFSha3.1 0.24 H281DRAFT_02360 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein 0.24 H281DRAFT_00078 phosphomannomutase — —
Paraburkholderia graminis OAS925 0.24 ABIE53_000291 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein 0.23 ABIE53_001189 phosphomannomutase/phosphoglucomutase — —
Dechlorosoma suillum PS 0.24 Dsui_2868 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain protein 0.23 Dsui_3344 phosphomannomutase — —
Ralstonia sp. UNC404CL21Col 0.23 ABZR87_RS12805 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC 0.23 ABZR87_RS08745 phosphomannomutase/phosphoglucomutase — —
Burkholderia phytofirmans PsJN 0.23 BPHYT_RS19575 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC 0.24 BPHYT_RS04470 phosphoglucomutase — —
Ralstonia solanacearum PSI07 0.22 RPSI07_RS16115 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC 0.22 RPSI07_RS20565 phosphomannomutase/phosphoglucomutase — —
Ralstonia solanacearum GMI1000 0.22 RS_RS08635 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC 0.22 RS_RS03475 phosphomannomutase/phosphoglucomutase — —
Methylophilus sp. DMC18 0.22 GFF715 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC 0.23 GFF69 Phosphomannomutase/phosphoglucomutase low > 43
Ralstonia solanacearum IBSBF1503 0.22 RALBFv3_RS01360 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC 0.22 RALBFv3_RS12695 phosphomannomutase/phosphoglucomutase — —
Ralstonia solanacearum UW163 0.22 UW163_RS14670 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC 0.22 UW163_RS00870 phosphomannomutase/phosphoglucomutase — —
Paraburkholderia sabiae LMG 24235 0.22 QEN71_RS29485 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC 0.24 QEN71_RS25415 phosphomannomutase/phosphoglucomutase — —
Acinetobacter radioresistens SK82 0.20 MPMX26_02642 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC 0.62 MPMX26_00067 Phosphomannomutase/phosphoglucomutase low > 36
Acinetobacter baumannii LAC-4 0.20 RR41_RS02870 FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC 0.65 RR41_RS18520 phosphomannomutase/phosphoglucomutase low > 55
Cupriavidus basilensis FW507-4G11 0.19 RR42_RS09010 FAD-dependent cmnm(5)s(2)U34 oxidoreductase 0.22 RR42_RS15690 phosphoglucomutase — —
Castellaniella sp019104865 MT123 0.16 ABCV34_RS09580 FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC 0.19 ABCV34_RS09280 phosphomannomutase/phosphoglucomutase — —
Herbaspirillum seropedicae SmR1 0.15 HSERO_RS23825 hypothetical protein 0.24 HSERO_RS02355 phosphoglucomutase low > 78
Variovorax sp. OAS795 0.15 ABID97_RS15455 FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC 0.24 ABID97_RS21385 phosphomannomutase/phosphoglucomutase 0.43 7
Acidovorax sp. GW101-3H11 0.15 Ac3H11_579 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61) / FAD-dependent cmnm(5)s(2)U34 oxidoreductase 0.25 Ac3H11_2215 Phosphomannomutase (EC 5.4.2.8) — —
Variovorax sp. SCN45 0.14 GFF1245 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61) / FAD-dependent cmnm(5)s(2)U34 oxidoreductase 0.24 GFF6532 Phosphoglucomutase (EC 5.4.2.2) @ Phosphomannomutase (EC 5.4.2.8) low > 127
Caulobacter crescentus NA1000 0.13 CCNA_00785 tRNA methyltransferase/FAD-dependent oxidoreductase MnmC 0.15 CCNA_02347 phosphomannomutase/phosphoglucomutase low > 66
Caulobacter crescentus NA1000 Δfur 0.13 CCNA_00785 tRNA methyltransferase/FAD-dependent oxidoreductase MnmC 0.15 CCNA_02347 phosphomannomutase/phosphoglucomutase low > 67

Not shown: 14 genomes with orthologs for CSW01_10535 only; 29 genomes with orthologs for CSW01_01275 only