Conservation of cofitness between CSW01_14090 and CSW01_01265 in Vibrio cholerae E7946 ATCC 55056

57 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_14090 NAD(P)-dependent oxidoreductase 1.0 CSW01_01265 ADP-L-glycero-D-mannoheptose-6-epimerase 0.61 17
Cupriavidus basilensis FW507-4G11 0.55 RR42_RS31100 oxidoreductase 0.46 RR42_RS04520 ADP-L-glycero-D-manno-heptose-6-epimerase — —
Rhodopseudomonas palustris CGA009 0.54 TX73_010170 NAD(P)-dependent oxidoreductase 0.32 TX73_020650 ADP-glyceromanno-heptose 6-epimerase — —
Shewanella loihica PV-4 0.54 Shew_1609 6-phosphogluconate dehydrogenase, NAD-binding (RefSeq) 0.57 Shew_3694 ADP-L-glycero-D-manno-heptose-6-epimerase (RefSeq) low > 60
Caulobacter crescentus NA1000 Δfur 0.50 CCNA_01645 3-hydroxyisobutyrate dehydrogenase 0.27 CCNA_01497 ADP-L-glycero-D-manno-heptose-6-epimerase low > 67
Caulobacter crescentus NA1000 0.50 CCNA_01645 3-hydroxyisobutyrate dehydrogenase 0.27 CCNA_01497 ADP-L-glycero-D-manno-heptose-6-epimerase low > 66
Pseudomonas aeruginosa PA14 0.49 IKLFDK_07540 oxidoreductase 0.44 IKLFDK_17110 ADP-glyceromanno-heptose 6-epimerase low > 98
Pseudomonas aeruginosa MRSN321 0.49 DY961_RS19525 NAD(P)-dependent oxidoreductase 0.44 DY961_RS00180 rfaD;go_function=ADP-glyceromanno-heptose ADP-glyceromanno-heptose 6-epimerase low > 100
Pseudomonas aeruginosa PUPa3 0.48 DQ20_RS53640 NAD(P)-dependent oxidoreductase 0.44 DQ20_RS40835 rfaD;go_function=ADP-glyceromanno-heptose ADP-glyceromanno-heptose 6-epimerase low > 101
Brevundimonas sp. GW460-12-10-14-LB2 0.43 A4249_RS06070 NAD(P)-dependent oxidoreductase 0.27 A4249_RS05625 ADP-glyceromanno-heptose 6-epimerase low > 48
Escherichia coli Nissle 1917 0.31 ECOLIN_RS17960 2-hydroxy-3-oxopropionate reductase 0.73 ECOLIN_RS20645 ADP-glyceromanno-heptose 6-epimerase low > 55
Escherichia coli ECRC98 0.31 JDDGAC_22000 garR 2-hydroxy-3-oxopropionate reductase 0.73 JDDGAC_19325 rfaD ADP-glyceromanno-heptose 6-epimerase — —
Dechlorosoma suillum PS 0.31 Dsui_3436 beta-hydroxyacid dehydrogenase, 3-hydroxyisobutyrate dehydrogenase 0.52 Dsui_1953 ADP-L-glycero-D-manno-heptose-6-epimerase — —
Escherichia coli ECRC100 0.31 OKFHMN_18370 garR 2-hydroxy-3-oxopropionate reductase 0.73 OKFHMN_15700 rfaD ADP-glyceromanno-heptose 6-epimerase — —
Escherichia coli BW25113 0.31 b3125 garR tartronate semialdehyde reductase (RefSeq) 0.73 b3619 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding (NCBI) low > 76
Escherichia coli ECRC102 0.31 NIAGMN_16130 garR 2-hydroxy-3-oxopropionate reductase 0.73 NIAGMN_13460 rfaD ADP-glyceromanno-heptose 6-epimerase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.31 OHPLBJKB_00578 2-hydroxy-3-oxopropionate reductase 0.73 OHPLBJKB_00081 ADP-L-glycero-D-manno-heptose-6-epimerase — —
Escherichia coli ECRC99 0.31 KEDOAH_09780 garR 2-hydroxy-3-oxopropionate reductase 0.73 KEDOAH_12450 rfaD ADP-glyceromanno-heptose 6-epimerase — —
Escherichia coli BL21 0.31 ECD_02990 tartronate semialdehyde reductase 0.73 ECD_03476 ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding — —
Escherichia coli ECOR27 0.31 NOLOHH_10150 garR 2-hydroxy-3-oxopropionate reductase 0.73 NOLOHH_07580 rfaD ADP-glyceromanno-heptose 6-epimerase — —
Escherichia coli ECRC62 0.31 BNILDI_01380 garR 2-hydroxy-3-oxopropionate reductase 0.73 BNILDI_03930 rfaD ADP-glyceromanno-heptose 6-epimerase — —
Escherichia coli ECRC101 0.31 MCAODC_08880 garR 2-hydroxy-3-oxopropionate reductase 0.73 MCAODC_06210 rfaD ADP-glyceromanno-heptose 6-epimerase — —
Escherichia coli ECOR38 0.31 HEPCGN_17205 garR 2-hydroxy-3-oxopropionate reductase 0.73 HEPCGN_14545 rfaD ADP-glyceromanno-heptose 6-epimerase — —
Rahnella sp. WP5 0.30 EX31_RS07980 2-hydroxy-3-oxopropionate reductase 0.71 EX31_RS14395 ADP-glyceromanno-heptose 6-epimerase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.30 GFF1536 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60) 0.72 GFF392 ADP-L-glycero-D-manno-heptose-6-epimerase (EC 5.1.3.20) low > 78
Klebsiella pneumoniae MKP103 0.30 KDGMDA_05690 2-hydroxy-3-oxopropionate reductase 0.72 KDGMDA_07945 ADP-glyceromanno-heptose 6-epimerase — —
Escherichia fergusonii Becca 0.29 EFB2_00694 2-hydroxy-3-oxopropionate reductase 0.73 EFB2_00192 ADP-L-glycero-D-manno-heptose-6-epimerase — —
Klebsiella michiganensis M5al 0.29 BWI76_RS24825 2-hydroxy-3-oxopropionate reductase 0.72 BWI76_RS27260 ADP-L-glycero-D-mannoheptose-6-epimerase — —
Dickeya dadantii 3937 0.29 DDA3937_RS17035 2-hydroxy-3-oxopropionate reductase 0.71 DDA3937_RS20440 ADP-glyceromanno-heptose 6-epimerase — —
Dickeya dianthicola ME23 0.28 DZA65_RS18165 2-hydroxy-3-oxopropionate reductase 0.70 DZA65_RS00825 ADP-glyceromanno-heptose 6-epimerase — —
Pantoea sp. MT58 0.28 IAI47_04100 2-hydroxy-3-oxopropionate reductase 0.69 IAI47_00690 ADP-glyceromanno-heptose 6-epimerase — —
Erwinia tracheiphila SCR3 0.28 LU632_RS06330 garR 2-hydroxy-3-oxopropionate reductase 0.70 LU632_RS21915 rfaD ADP-glyceromanno-heptose 6-epimerase — —
Enterobacter asburiae PDN3 0.28 EX28DRAFT_3182 2-hydroxy-3-oxopropionate reductase 0.72 EX28DRAFT_3871 ADP-L-glycero-D-manno-heptose-6-epimerase — —
Erwinia tracheiphila HP pepo 2.2 0.28 IJEDHG_17355 garR 2-hydroxy-3-oxopropionate reductase 0.70 IJEDHG_07870 rfaD ADP-glyceromanno-heptose 6-epimerase — —
Enterobacter sp. TBS_079 0.28 MPMX20_04033 2-hydroxy-3-oxopropionate reductase 0.72 MPMX20_00114 ADP-L-glycero-D-manno-heptose-6-epimerase — —
Pantoea agglomerans CFBP13505 P0401 0.28 PagCFBP13505_RS16870 2-hydroxy-3-oxopropionate reductase 0.70 PagCFBP13505_RS18655 ADP-glyceromanno-heptose 6-epimerase — —
Dickeya dianthicola 67-19 0.28 HGI48_RS17090 2-hydroxy-3-oxopropionate reductase 0.70 HGI48_RS00770 ADP-glyceromanno-heptose 6-epimerase — —
Ralstonia solanacearum UW163 0.28 UW163_RS09050 NAD(P)-dependent oxidoreductase 0.48 UW163_RS15995 ADP-glyceromanno-heptose 6-epimerase — —
Ralstonia solanacearum IBSBF1503 0.28 RALBFv3_RS04620 NAD(P)-dependent oxidoreductase 0.48 RALBFv3_RS13815 ADP-glyceromanno-heptose 6-epimerase — —
Ralstonia sp. UNC404CL21Col 0.28 ABZR87_RS00230 NAD(P)-dependent oxidoreductase 0.49 ABZR87_RS09505 ADP-glyceromanno-heptose 6-epimerase low > 80
Paraburkholderia sabiae LMG 24235 0.28 QEN71_RS32505 2-hydroxy-3-oxopropionate reductase 0.49 QEN71_RS04125 ADP-glyceromanno-heptose 6-epimerase — —
Ralstonia solanacearum PSI07 0.28 RPSI07_RS12755 NAD(P)-dependent oxidoreductase 0.48 RPSI07_RS19655 ADP-glyceromanno-heptose 6-epimerase — —
Paraburkholderia bryophila 376MFSha3.1 0.27 H281DRAFT_05314 2-hydroxy-3-oxopropionate reductase 0.48 H281DRAFT_03913 ADP-glyceromanno-heptose 6-epimerase precursor — —
Paraburkholderia graminis OAS925 0.27 ABIE53_006511 2-hydroxy-3-oxopropionate reductase 0.48 ABIE53_003146 ADP-L-glycero-D-manno-heptose 6-epimerase — —
Castellaniella sp019104865 MT123 0.27 ABCV34_RS12130 2-hydroxy-3-oxopropionate reductase 0.49 ABCV34_RS07065 ADP-glyceromanno-heptose 6-epimerase — —
Azospirillum brasilense Sp245 0.27 AZOBR_RS07955 tartronate semialdehyde reductase 0.33 AZOBR_RS31160 ADP-L-glycero-D-manno-heptose-6-epimerase low > 97
Xanthobacter sp. DMC5 0.27 GFF1957 2-hydroxy-3-oxopropionate reductase 0.30 GFF369 ADP-L-glycero-D-manno-heptose-6-epimerase — —
Desulfovibrio vulgaris Miyazaki F 0.27 DvMF_2927 garR tartronate semialdehyde reductase (RefSeq) 0.37 DvMF_1734 ADP-L-glycero-D-manno-heptose-6-epimerase (RefSeq) — —
Burkholderia phytofirmans PsJN 0.27 BPHYT_RS24130 tartronate semialdehyde reductase 0.48 BPHYT_RS14855 ADP-L-glycero-D-manno-heptose-6-epimerase — —
Ralstonia solanacearum GMI1000 0.26 RS_RS16450 2-hydroxy-3-oxopropionate reductase 0.48 RS_RS04550 ADP-L-glycero-D-mannoheptose-6-epimerase low > 80
Pectobacterium carotovorum WPP14 0.26 HER17_RS04095 2-hydroxy-3-oxopropionate reductase 0.71 HER17_RS20770 ADP-glyceromanno-heptose 6-epimerase low > 75
Pseudomonas sp. BP01 0.25 JOY50_RS00360 2-hydroxy-3-oxopropionate reductase 0.45 JOY50_RS12210 rfaD ADP-glyceromanno-heptose 6-epimerase low > 84
Azospirillum sp. SherDot2 0.23 MPMX19_05813 2-hydroxy-3-oxopropionate reductase 0.34 MPMX19_01823 ADP-L-glycero-D-manno-heptose-6-epimerase — —
Pseudomonas sp. SVBP6 0.23 COO64_RS25875 2-hydroxy-3-oxopropionate reductase 0.44 COO64_RS00370 rfaD ADP-glyceromanno-heptose 6-epimerase low > 93
Magnetospirillum magneticum AMB-1 0.22 AMB_RS18155 3-hydroxyisobutyrate dehydrogenase 0.30 AMB_RS03075 ADP-glyceromanno-heptose 6-epimerase — —
Serratia liquefaciens MT49 0.17 IAI46_07605 NAD(P)-dependent oxidoreductase 0.73 IAI46_24735 ADP-glyceromanno-heptose 6-epimerase — —
Rhodospirillum rubrum S1H 0.15 Rru_A1833 3-hydroxyisobutyrate dehydrogenase (NCBI) 0.31 Rru_A3278 ADP-L-glycero-D-manno-heptose-6-epimerase (NCBI) — —
Erwinia amylovora T8 0.13 OLJFJH_17300 3-hydroxyisobutyrate dehydrogenase 0.70 OLJFJH_05885 ADP-glyceromanno-heptose 6-epimerase — —

Not shown: 49 genomes with orthologs for CSW01_14090 only; 5 genomes with orthologs for CSW01_01265 only