| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Klebsiella michiganensis M5al | 1.0 | BWI76_RS06780 | | MexE family multidrug efflux RND transporter periplasmic adaptor subunit | 1.0 | BWI76_RS19805 | | Bcr/CflA family multidrug efflux MFS transporter | 0.43 | 12 |
| Enterobacter sp. TBS_079 | 0.87 | MPMX20_01065 | | Multidrug efflux pump subunit AcrA | 0.85 | MPMX20_03148 | | Bicyclomycin resistance protein | low | > 85 |
| Enterobacter asburiae PDN3 | 0.84 | EX28DRAFT_2495 | | RND family efflux transporter, MFP subunit | 0.86 | EX28DRAFT_0379 | | drug resistance transporter, Bcr/CflA subfamily | low | > 76 |
| Escherichia coli ECRC62 | 0.83 | BNILDI_22550 | acrA | multidrug efflux RND transporter periplasmic adaptor subunit AcrA | 0.81 | BNILDI_13860 | bcr | multidrug efflux MFS transporter Bcr | low | > 75 |
| Escherichia coli ECRC101 | 0.83 | MCAODC_27425 | acrA | multidrug efflux RND transporter periplasmic adaptor subunit AcrA | 0.84 | MCAODC_14415 | bcr | multidrug efflux MFS transporter Bcr | low | > 87 |
| Escherichia coli ECOR27 | 0.83 | NOLOHH_01135 | acrA | multidrug efflux RND transporter periplasmic adaptor subunit AcrA | 0.81 | NOLOHH_14940 | bcr | multidrug efflux MFS transporter Bcr | low | > 75 |
| Escherichia coli ECRC102 | 0.83 | NIAGMN_06255 | acrA | multidrug efflux RND transporter periplasmic adaptor subunit AcrA | 0.84 | NIAGMN_21130 | bcr | multidrug efflux MFS transporter Bcr | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.83 | OHPLBJKB_03211 | | Multidrug efflux pump subunit AcrA | 0.82 | OHPLBJKB_01527 | | Bicyclomycin resistance protein | low | > 73 |
| Escherichia coli ECRC98 | 0.83 | JDDGAC_11850 | acrA | multidrug efflux RND transporter periplasmic adaptor subunit AcrA | 0.84 | JDDGAC_27325 | bcr | multidrug efflux MFS transporter Bcr | low | > 86 |
| Escherichia coli BW25113 | 0.83 | b0463 | acrA | multidrug efflux system (NCBI) | 0.82 | b2182 | bcr | bicyclomycin/multidrug efflux system (NCBI) | low | > 76 |
| Escherichia coli ECRC100 | 0.83 | OKFHMN_08200 | acrA | multidrug efflux RND transporter periplasmic adaptor subunit AcrA | 0.83 | OKFHMN_23365 | bcr | multidrug efflux MFS transporter Bcr | low | > 80 |
| Escherichia coli BL21 | 0.83 | ECD_00414 | | multidrug efflux system | 0.82 | ECD_02112 | | bicyclomycin/cysteine/sulfonamide efflux transporter | low | > 61 |
| Escherichia coli ECRC99 | 0.83 | KEDOAH_19765 | acrA | multidrug efflux RND transporter periplasmic adaptor subunit AcrA | 0.84 | KEDOAH_04820 | bcr | multidrug efflux MFS transporter Bcr | — | — |
| Escherichia fergusonii Becca | 0.82 | EFB2_03595 | | Multidrug efflux pump subunit AcrA | 0.84 | EFB2_01674 | | Bicyclomycin resistance protein | low | > 86 |
| Escherichia coli Nissle 1917 | 0.82 | ECOLIN_RS02755 | | multidrug efflux RND transporter periplasmic adaptor subunit AcrA | 0.84 | ECOLIN_RS12755 | | multidrug efflux MFS transporter Bcr | — | — |
| Escherichia coli ECOR38 | 0.82 | HEPCGN_06815 | acrA | multidrug efflux RND transporter periplasmic adaptor subunit AcrA | 0.84 | HEPCGN_22630 | bcr | multidrug efflux MFS transporter Bcr | low | > 87 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.78 | GFF4380 | | Membrane fusion protein of RND family multidrug efflux pump | 0.84 | GFF3754 | | MFS family multidrug transport protein, bicyclomycin resistance protein | low | > 78 |
| Pantoea sp. MT58 | 0.74 | IAI47_14510 | | efflux RND transporter periplasmic adaptor subunit | 0.71 | IAI47_06590 | | Bcr/CflA family multidrug efflux MFS transporter | low | > 76 |
| Rahnella sp. WP5 | 0.74 | EX31_RS22475 | | efflux RND transporter periplasmic adaptor subunit | 0.67 | EX31_RS19190 | | Bcr/CflA family multidrug efflux MFS transporter | low | > 89 |
| Erwinia tracheiphila SCR3 | 0.74 | LU632_RS18180 | | efflux RND transporter periplasmic adaptor subunit | 0.61 | LU632_RS17590 | | Bcr/CflA family multidrug efflux MFS transporter | — | — |
| Serratia liquefaciens MT49 | 0.74 | IAI46_05190 | | multidrug efflux RND transporter periplasmic adaptor subunit SdeX | 0.73 | IAI46_17340 | | Bcr/CflA family multidrug efflux MFS transporter | low | > 86 |
| Dickeya dadantii 3937 | 0.71 | DDA3937_RS05740 | | efflux RND transporter periplasmic adaptor subunit | 0.71 | DDA3937_RS09165 | | Bcr/CflA family multidrug efflux MFS transporter | low | > 74 |
| Dickeya dianthicola 67-19 | 0.69 | HGI48_RS05795 | | efflux RND transporter periplasmic adaptor subunit | 0.70 | HGI48_RS09205 | | Bcr/CflA family multidrug efflux MFS transporter | low | > 71 |
| Dickeya dianthicola ME23 | 0.69 | DZA65_RS06120 | | efflux RND transporter periplasmic adaptor subunit | 0.70 | DZA65_RS09505 | | Bcr/CflA family multidrug efflux MFS transporter | low | > 75 |
| Pectobacterium carotovorum WPP14 | 0.68 | HER17_RS15735 | | efflux RND transporter periplasmic adaptor subunit | 0.73 | HER17_RS12945 | | Bcr/CflA family multidrug efflux MFS transporter | low | > 75 |
| Pseudomonas syringae pv. syringae B728a | 0.51 | Psyr_4007 | | Secretion protein HlyD | 0.26 | Psyr_0657 | | Drug resistance transporter Bcr/CflA subfamily | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.51 | Psyr_4007 | | Secretion protein HlyD | 0.26 | Psyr_0657 | | Drug resistance transporter Bcr/CflA subfamily | low | > 86 |
| Pseudomonas sp. RS175 | 0.51 | PFR28_00632 | | putative efflux pump periplasmic linker TtgA | 0.23 | PFR28_05247 | | Bicyclomycin resistance protein | low | > 88 |
| Pseudomonas sp. S08-1 | 0.50 | OH686_16045 | | Multidrug efflux system, membrane fusion component | 0.26 | OH686_07365 | | Multidrug resistance transporter, Bcr/CflA family | low | > 80 |
| Pseudomonas stutzeri RCH2 | 0.48 | Psest_0309 | | RND family efflux transporter, MFP subunit | 0.25 | Psest_0741 | | drug resistance transporter, Bcr/CflA subfamily | low | > 67 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.47 | Xcc-8004.1793.1 | | RND efflux system, membrane fusion protein CmeA | 0.18 | Xcc-8004.3876.1 | | MFS transporter | low | > 74 |
| Herbaspirillum seropedicae SmR1 | 0.47 | HSERO_RS06810 | | hemolysin D | 0.28 | HSERO_RS23560 | | MFS transporter | low | > 78 |
| Azospirillum brasilense Sp245 | 0.46 | AZOBR_RS30180 | | hemolysin D | 0.24 | AZOBR_RS00095 | | MFS transporter permease | low | > 97 |
| Paraburkholderia sabiae LMG 24235 | 0.46 | QEN71_RS29870 | | efflux RND transporter periplasmic adaptor subunit | 0.29 | QEN71_RS03315 | | Bcr/CflA family multidrug efflux MFS transporter | low | > 153 |
| Burkholderia phytofirmans PsJN | 0.46 | BPHYT_RS34600 | | hemolysin D | 0.29 | BPHYT_RS15365 | | Bcr/CflA family drug resistance efflux transporter | low | > 109 |
| Azospirillum sp. SherDot2 | 0.46 | MPMX19_05883 | | Multidrug resistance protein MexA | 0.30 | MPMX19_06022 | | Bicyclomycin resistance protein | low | > 112 |
| Dyella japonica UNC79MFTsu3.2 | 0.45 | ABZR86_RS18280 | | efflux RND transporter periplasmic adaptor subunit | 0.26 | ABZR86_RS00225 | | multidrug effflux MFS transporter | low | > 74 |
| Cupriavidus basilensis FW507-4G11 | 0.45 | RR42_RS32415 | | hemolysin D | 0.29 | RR42_RS28940 | | Bcr/CflA family drug resistance efflux transporter | low | > 128 |
| Rhodospirillum rubrum S1H | 0.45 | Rru_A2050 | | Secretion protein HlyD (NCBI) | 0.18 | Rru_A2971 | | Drug resistance transporter Bcr/CflA subfamily (NCBI) | low | > 58 |
| Shewanella amazonensis SB2B | 0.44 | Sama_3553 | | multidrug resistance protein AcrA/AcrE family (RefSeq) | 0.24 | Sama_2017 | | bicyclomycin resistance protein (RefSeq) | low | > 62 |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.44 | DVU2817 | acrA | multidrug resistance protein (TIGR) | 0.09 | DVU1895 | | major facilitator superfamily protein (TIGR) | low | > 55 |
| Ralstonia solanacearum UW163 | 0.44 | UW163_RS19385 | | efflux RND transporter periplasmic adaptor subunit | 0.27 | UW163_RS23085 | | Bcr/CflA family drug resistance efflux transporter | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.44 | RALBFv3_RS19790 | | efflux RND transporter periplasmic adaptor subunit | 0.27 | RALBFv3_RS22540 | | Bcr/CflA family drug resistance efflux transporter | low | > 76 |
| Ralstonia solanacearum GMI1000 | 0.44 | RS_RS21035 | | efflux RND transporter periplasmic adaptor subunit | 0.29 | RS_RS01070 | | MFS transporter | low | > 80 |
| Shewanella oneidensis MR-1 | 0.44 | SO4693 | | multidrug resistance protein, AcrA/AcrE family (NCBI ptt file) | 0.23 | SO2280 | | bicyclomycin resistance protein (NCBI ptt file) | low | > 76 |
| Shewanella sp. ANA-3 | 0.44 | Shewana3_4046 | | RND family efflux transporter MFP subunit (RefSeq) | 0.23 | Shewana3_2268 | | Bcr/CflA subfamily drug resistance transporter (RefSeq) | low | > 73 |
| Ralstonia solanacearum PSI07 | 0.44 | RPSI07_RS23900 | | efflux RND transporter periplasmic adaptor subunit | 0.27 | RPSI07_RS00615 | | MFS transporter | low | > 81 |
| Rhizobium sp. OAE497 | 0.43 | ABIE40_RS24220 | | efflux RND transporter periplasmic adaptor subunit | 0.19 | ABIE40_RS09565 | | multidrug effflux MFS transporter | low | > 107 |
| Rhodopseudomonas palustris CGA009 | 0.43 | TX73_012250 | | efflux RND transporter periplasmic adaptor subunit | 0.19 | TX73_018225 | | multidrug effflux MFS transporter | low | > 86 |
| Bosea sp. OAE506 | 0.40 | ABIE41_RS01600 | | efflux RND transporter periplasmic adaptor subunit | 0.22 | ABIE41_RS02750 | | multidrug effflux MFS transporter | low | > 77 |
| Variovorax sp. OAS795 | 0.38 | ABID97_RS00320 | | efflux RND transporter periplasmic adaptor subunit | 0.21 | ABID97_RS10530 | | multidrug effflux MFS transporter | low | > 91 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.38 | GFF5686 | | RND efflux system, membrane fusion protein CmeA | 0.16 | GFF5490 | | Multidrug resistance transporter, Bcr/CflA family | low | > 90 |
| Agrobacterium fabrum C58 | 0.37 | Atu3203 | | RND multidrug efflux membrane permease | 0.20 | Atu1855 | | MFS permease | low | > 89 |
| Acidovorax sp. GW101-3H11 | 0.34 | Ac3H11_4449 | | RND efflux system, membrane fusion protein CmeA | 0.22 | Ac3H11_1673 | | MFS transporter | low | > 79 |
| Kangiella aquimarina DSM 16071 | 0.33 | B158DRAFT_0734 | | RND family efflux transporter, MFP subunit | 0.25 | B158DRAFT_0826 | | drug resistance transporter, Bcr/CflA subfamily | low | > 40 |
| Lysobacter sp. OAE881 | 0.30 | ABIE51_RS17985 | | efflux RND transporter periplasmic adaptor subunit | 0.19 | ABIE51_RS14645 | | multidrug effflux MFS transporter | low | > 62 |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.20 | CA265_RS23015 | | efflux transporter periplasmic adaptor subunit | 0.24 | CA265_RS08155 | | Bcr/CflA family drug resistance efflux transporter | low | > 88 |
Not shown: 17 genomes with orthologs for BWI76_RS06780 only; 14 genomes with orthologs for BWI76_RS19805 only