Conservation of cofitness between BPHYT_RS02150 and BPHYT_RS18310 in Burkholderia phytofirmans PsJN

56 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS02150 biotin synthase 1.0 BPHYT_RS18310 malic enzyme 0.24 18
Paraburkholderia bryophila 376MFSha3.1 0.91 H281DRAFT_02097 biotin synthase 0.98 H281DRAFT_05846 malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) low > 103
Paraburkholderia graminis OAS925 0.90 ABIE53_000577 biotin synthase 0.98 ABIE53_000015 malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) low > 113
Paraburkholderia sabiae LMG 24235 0.85 QEN71_RS01085 biotin synthase BioB 0.92 QEN71_RS28455 NADP-dependent malic enzyme — —
Ralstonia solanacearum PSI07 0.71 RPSI07_RS22850 biotin synthase BioB 0.66 RPSI07_RS14050 NADP-dependent malic enzyme low > 81
Ralstonia solanacearum GMI1000 0.70 RS_RS01305 biotin synthase 0.67 RS_RS10650 NADP-dependent malic enzyme 0.65 7
Ralstonia solanacearum IBSBF1503 0.70 RALBFv3_RS10465 biotin synthase BioB 0.66 RALBFv3_RS03260 NADP-dependent malic enzyme low > 76
Ralstonia solanacearum UW163 0.70 UW163_RS03115 biotin synthase BioB 0.66 UW163_RS10465 NADP-dependent malic enzyme — —
Ralstonia sp. UNC404CL21Col 0.69 ABZR87_RS06265 biotin synthase BioB 0.66 ABZR87_RS15110 NADP-dependent malic enzyme low > 80
Cupriavidus basilensis FW507-4G11 0.67 RR42_RS00940 biotin synthase 0.66 RR42_RS05210 malic enzyme low > 128
Hydrogenophaga sp. GW460-11-11-14-LB1 0.60 GFF3992 Biotin synthase (EC 2.8.1.6) 0.65 GFF3306 NADP-dependent malic enzyme (EC 1.1.1.40) low > 90
Dyella japonica UNC79MFTsu3.2 0.59 ABZR86_RS15840 biotin synthase BioB 0.60 ABZR86_RS12415 NADP-dependent malic enzyme low > 74
Acidovorax sp. GW101-3H11 0.57 Ac3H11_2272 Biotin synthase (EC 2.8.1.6) 0.64 Ac3H11_1079 NADP-dependent malic enzyme (EC 1.1.1.40) low > 79
Castellaniella sp019104865 MT123 0.57 ABCV34_RS15280 biotin synthase BioB 0.69 ABCV34_RS01715 NADP-dependent malic enzyme low > 48
Escherichia coli ECRC101 0.57 MCAODC_25615 bioB biotin synthase BioB 0.63 MCAODC_12535 maeB NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase low > 87
Escherichia coli ECRC102 0.57 NIAGMN_04445 bioB biotin synthase BioB 0.63 NIAGMN_19775 maeB NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase — —
Escherichia coli ECRC100 0.57 OKFHMN_06400 bioB biotin synthase BioB 0.63 OKFHMN_22005 maeB NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase 0.65 18
Escherichia coli ECRC98 0.57 JDDGAC_10035 bioB biotin synthase BioB 0.63 JDDGAC_25950 maeB NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase low > 86
Escherichia coli ECRC99 0.57 KEDOAH_21510 bioB biotin synthase BioB 0.63 KEDOAH_06215 maeB NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase — —
Escherichia coli ECRC62 0.56 BNILDI_21040 bioB biotin synthase BioB 0.63 BNILDI_12495 maeB NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase low > 75
Enterobacter sp. TBS_079 0.56 MPMX20_01403 Biotin synthase 0.63 MPMX20_03324 NADP-dependent malic enzyme low > 85
Lysobacter sp. OAE881 0.56 ABIE51_RS01140 biotin synthase BioB 0.61 ABIE51_RS18820 NADP-dependent malic enzyme 0.51 10
Klebsiella michiganensis M5al 0.56 BWI76_RS08760 biotin synthase 0.63 BWI76_RS20830 bifunctional malic enzyme oxidoreductase/phosphotransacetylase low > 92
Escherichia coli BL21 0.56 ECD_00742 biotin synthase 0.63 ECD_02354 malic enzyme: putative oxidoreductase/phosphotransacetylase low > 61
Escherichia coli BW25113 0.56 b0775 bioB biotin synthase (NCBI) 0.63 b2463 maeB malic enzyme (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.56 OHPLBJKB_02938 Biotin synthase 0.63 OHPLBJKB_01268 NADP-dependent malic enzyme low > 73
Escherichia coli ECOR27 0.56 NOLOHH_22770 bioB biotin synthase BioB 0.63 NOLOHH_13685 maeB NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase low > 75
Escherichia coli ECOR38 0.56 HEPCGN_01640 bioB biotin synthase BioB 0.63 HEPCGN_21175 maeB NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase low > 87
Enterobacter asburiae PDN3 0.56 EX28DRAFT_2216 biotin synthase (EC 2.8.1.6) 0.63 EX28DRAFT_0198 Malic enzyme low > 76
Escherichia fergusonii Becca 0.56 EFB2_03330 Biotin synthase 0.63 EFB2_01425 NADP-dependent malic enzyme low > 86
Variovorax sp. SCN45 0.56 GFF937 Biotin synthase (EC 2.8.1.6) 0.65 GFF1796 NADP-dependent malic enzyme (EC 1.1.1.40) low > 127
Escherichia coli Nissle 1917 0.56 ECOLIN_RS04130 biotin synthase BioB 0.63 ECOLIN_RS14055 NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase low > 55
Xanthomonas campestris pv. campestris strain 8004 0.56 Xcc-8004.505.1 Biotin synthase (EC 2.8.1.6) 0.59 Xcc-8004.1035.1 NADP-dependent malic enzyme (EC 1.1.1.40) — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.56 GFF671 Biotin synthase (EC 2.8.1.6) 0.63 GFF2198 NADP-dependent malic enzyme (EC 1.1.1.40) low > 78
Dechlorosoma suillum PS 0.56 Dsui_1297 biotin synthetase 0.67 Dsui_0543 malic enzyme low > 51
Dickeya dadantii 3937 0.55 DDA3937_RS08510 biotin synthase BioB 0.63 DDA3937_RS04355 NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase low > 74
Dickeya dianthicola ME23 0.55 DZA65_RS08965 biotin synthase BioB 0.62 DZA65_RS04265 NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase low > 75
Variovorax sp. OAS795 0.55 ABID97_RS13955 biotin synthase BioB 0.64 ABID97_RS22340 NADP-dependent malic enzyme low > 91
Serratia liquefaciens MT49 0.55 IAI46_06525 biotin synthase BioB 0.63 IAI46_18585 NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase low > 86
Rhodanobacter sp. FW510-T8 0.55 OKGIIK_13650 bioB biotin synthase BioB 0.59 OKGIIK_12705 pta NADP-dependent malic enzyme low > 52
Rhodanobacter denitrificans FW104-10B01 0.55 LRK54_RS10260 biotin synthase BioB 0.59 LRK54_RS11170 NADP-dependent malic enzyme low > 59
Rhodanobacter denitrificans MT42 0.55 LRK55_RS09900 biotin synthase BioB 0.59 LRK55_RS10875 NADP-dependent malic enzyme — —
Rahnella sp. WP5 0.55 EX31_RS23695 biotin synthase BioB 0.64 EX31_RS20275 NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase low > 89
Dickeya dianthicola 67-19 0.55 HGI48_RS08675 biotin synthase BioB 0.62 HGI48_RS04345 NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase low > 71
Pectobacterium carotovorum WPP14 0.55 HER17_RS13460 biotin synthase BioB 0.64 HER17_RS17280 NADP-dependent oxaloacetate-decarboxylating malate dehydrogenase low > 75
Magnetospirillum magneticum AMB-1 0.55 AMB_RS13865 biotin synthase 0.57 AMB_RS03695 NADP-dependent malic enzyme — —
Sphingomonas koreensis DSMZ 15582 0.54 Ga0059261_3989 biotin synthase (EC 2.8.1.6) 0.41 Ga0059261_3786 Malic enzyme low > 68
Acinetobacter radioresistens SK82 0.52 MPMX26_01785 Biotin synthase 0.60 MPMX26_01000 NADP-dependent malic enzyme low > 36
Agrobacterium fabrum C58 0.52 Atu3997 biotin synthetase 0.55 Atu1652 NADP-dependent malic enzyme — —
Rhodopseudomonas palustris CGA009 0.51 TX73_010535 biotin synthase BioB 0.52 TX73_015740 NADP-dependent malic enzyme low > 86
Phaeobacter inhibens DSM 17395 0.51 PGA1_c09120 biotin synthase BioB 0.54 PGA1_c11910 Malate dehydrogenase (decarboxylating) (EC 1.1.1.39) (from data) low > 62
Rhizobium sp. OAE497 0.49 ABIE40_RS21075 biotin synthase BioB 0.55 ABIE40_RS10450 NADP-dependent malic enzyme 0.42 69
Pontibacter actiniarum KMM 6156, DSM 19842 0.47 CA264_02425 biotin synthase BioB 0.43 CA264_14540 NADP-dependent malic enzyme low > 74
Echinicola vietnamensis KMM 6221, DSM 17526 0.47 Echvi_2566 biotin synthetase 0.45 Echvi_4081 Malic enzyme low > 79
Pedobacter sp. GW460-11-11-14-LB5 0.44 CA265_RS09475 biotin synthase BioB 0.44 CA265_RS19000 NADP-dependent malic enzyme low > 88
Mucilaginibacter yixingensis YX-36 DSM 26809 0.42 ABZR88_RS10190 biotin synthase BioB 0.43 ABZR88_RS18305 NADP-dependent malic enzyme low > 71
Parabacteroides merdae CL09T00C40 0.22 HMPREF1078_RS15300 biotin synthase BioB 0.42 HMPREF1078_RS07665 NADP-dependent malic enzyme low > 61

Not shown: 34 genomes with orthologs for BPHYT_RS02150 only; 12 genomes with orthologs for BPHYT_RS18310 only