Conservation of cofitness between BPHYT_RS30235 and BPHYT_RS14135 in Burkholderia phytofirmans PsJN

48 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS30235 tartrate dehydrogenase 1.0 BPHYT_RS14135 phosphate transporter permease subunit PtsA 0.23 10
Paraburkholderia graminis OAS925 0.98 ABIE53_005023 tartrate dehydrogenase/decarboxylase/D-malate dehydrogenase 0.96 ABIE53_002993 phosphate transport system permease protein low > 113
Paraburkholderia bryophila 376MFSha3.1 0.97 H281DRAFT_06345 tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase 0.96 H281DRAFT_04413 phosphate ABC transporter membrane protein 2, PhoT family low > 103
Paraburkholderia sabiae LMG 24235 0.88 QEN71_RS32005 tartrate dehydrogenase 0.92 QEN71_RS04830 phosphate ABC transporter permease PstA — —
Ralstonia solanacearum PSI07 0.80 RPSI07_RS07555 tartrate dehydrogenase 0.70 RPSI07_RS15305 phosphate ABC transporter, permease protein PstA low > 81
Ralstonia solanacearum GMI1000 0.79 RS_RS24845 tartrate dehydrogenase 0.74 RS_RS07680 phosphate ABC transporter, permease protein PstA low > 80
Ralstonia solanacearum IBSBF1503 0.78 RALBFv3_RS16145 tartrate dehydrogenase 0.70 RALBFv3_RS02140 phosphate transporter permease subunit PtsA low > 76
Ralstonia solanacearum UW163 0.78 UW163_RS16880 tartrate dehydrogenase 0.70 UW163_RS15450 phosphate transporter permease subunit PtsA — —
Ralstonia sp. UNC404CL21Col 0.77 ABZR87_RS21505 tartrate dehydrogenase 0.71 ABZR87_RS14090 phosphate ABC transporter permease PstA low > 80
Serratia liquefaciens MT49 0.76 IAI46_21025 tartrate dehydrogenase 0.69 IAI46_25185 phosphate ABC transporter permease PstA low > 86
Acidovorax sp. GW101-3H11 0.75 Ac3H11_3259 Tartrate dehydrogenase (EC 1.1.1.93) @ Tartrate decarboxylase (EC 4.1.1.73) @ D-malic enzyme (EC 1.1.1.83) 0.58 Ac3H11_458 Phosphate transport system permease protein PstA (TC 3.A.1.7.1) low > 79
Herbaspirillum seropedicae SmR1 0.75 HSERO_RS07390 tartrate dehydrogenase 0.58 HSERO_RS06320 phosphate transport system permease PstA low > 78
Variovorax sp. OAS795 0.75 ABID97_RS25885 tartrate dehydrogenase 0.64 ABID97_RS14605 phosphate ABC transporter permease PstA low > 91
Pseudomonas fluorescens FW300-N2C3 0.75 AO356_26735 tartrate dehydrogenase 0.30 AO356_26690 phosphate ABC transporter permease low > 104
Klebsiella michiganensis M5al 0.74 BWI76_RS10680 tartrate dehydrogenase 0.72 BWI76_RS00150 phosphate transporter permease subunit PtsA — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.73 Psyr_2396 Tartrate dehydrogenase 0.48 Psyr_3104 phosphate ABC transporter membrane protein 2, PhoT family low > 86
Pseudomonas syringae pv. syringae B728a 0.73 Psyr_2396 Tartrate dehydrogenase 0.48 Psyr_3104 phosphate ABC transporter membrane protein 2, PhoT family low > 86
Escherichia coli ECOR27 0.73 NOLOHH_17145 dmlA multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase 0.73 NOLOHH_07020 pstA phosphate ABC transporter permease PstA 0.53 31
Escherichia coli ECOR38 0.73 HEPCGN_05015 dmlA multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase 0.73 HEPCGN_13600 pstA phosphate ABC transporter permease PstA low > 87
Escherichia coli BW25113 0.72 b1800 yeaU predicted dehydrogenase (NCBI) 0.72 b3726 pstA phosphate transporter subunit (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.72 OHPLBJKB_01933 D-malate dehydrogenase [decarboxylating] 0.73 OHPLBJKB_04327 Phosphate transport system permease protein PstA low > 73
Pseudomonas fluorescens SBW25 0.72 PFLU_RS19735 tartrate dehydrogenase 0.29 PFLU_RS16160 phosphate ABC transporter permease PstA low > 109
Escherichia coli ECRC62 0.72 BNILDI_15930 dmlA multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase 0.73 BNILDI_04505 pstA phosphate ABC transporter permease PstA low > 75
Escherichia coli ECRC101 0.72 MCAODC_18785 dmlA multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase 0.73 MCAODC_05395 pstA phosphate ABC transporter permease PstA low > 87
Escherichia coli ECRC100 0.72 OKFHMN_26625 dmlA multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase 0.73 OKFHMN_14890 pstA phosphate ABC transporter permease PstA low > 80
Escherichia coli ECRC102 0.72 NIAGMN_01440 dmlA multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase 0.73 NIAGMN_12645 pstA phosphate ABC transporter permease PstA — —
Escherichia coli ECRC99 0.72 KEDOAH_01485 dmlA multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase 0.73 KEDOAH_13260 pstA phosphate ABC transporter permease PstA — —
Escherichia coli ECRC98 0.72 JDDGAC_01200 dmlA multifunctional D-malate/3-isopropylmalate/tartarate dehydrogenase 0.73 JDDGAC_18510 pstA phosphate ABC transporter permease PstA low > 86
Pseudomonas fluorescens SBW25-INTG 0.72 PFLU_RS19735 tartrate dehydrogenase 0.29 PFLU_RS16160 phosphate ABC transporter permease PstA low > 109
Escherichia coli BL21 0.72 ECD_01770 D-malate oxidase, NAD-dependent; putative tartrate dehydrogenase 0.73 ECD_03610 phosphate ABC transporter permease low > 61
Castellaniella sp019104865 MT123 0.72 ABCV34_RS14695 tartrate dehydrogenase 0.56 ABCV34_RS15595 phosphate ABC transporter permease PstA — —
Rhodopseudomonas palustris CGA009 0.67 TX73_008960 tartrate dehydrogenase 0.47 TX73_024835 phosphate ABC transporter permease PstA low > 86
Variovorax sp. SCN45 0.66 GFF6198 D-malate dehydrogenase [decarboxylating] (EC 1.1.1.83) 0.67 GFF1094 Phosphate ABC transporter, permease protein PstA (TC 3.A.1.7.1) low > 127
Bosea sp. OAE506 0.66 ABIE41_RS22540 tartrate dehydrogenase 0.48 ABIE41_RS08895 phosphate ABC transporter permease PstA low > 77
Cupriavidus basilensis FW507-4G11 0.66 RR42_RS02600 tartrate dehydrogenase 0.70 RR42_RS13460 phosphate transporter permease subunit PtsA low > 128
Dickeya dadantii 3937 0.66 DDA3937_RS04645 tartrate dehydrogenase 0.68 DDA3937_RS21460 phosphate ABC transporter permease PstA low > 74
Hydrogenophaga sp. GW460-11-11-14-LB1 0.66 GFF3852 Tartrate dehydrogenase (EC 1.1.1.93) / Tartrate decarboxylase (EC 4.1.1.73) / D-malic enzyme (EC 1.1.1.83) 0.59 GFF4232 Phosphate transport system permease protein PstA (TC 3.A.1.7.1) low > 90
Dickeya dianthicola ME23 0.66 DZA65_RS04525 tartrate dehydrogenase 0.68 DZA65_RS22550 phosphate ABC transporter permease PstA 0.37 24
Pantoea sp. MT58 0.65 IAI47_17525 tartrate dehydrogenase 0.72 IAI47_00225 phosphate ABC transporter permease PstA low > 76
Dickeya dianthicola 67-19 0.65 HGI48_RS04605 tartrate dehydrogenase 0.68 HGI48_RS21570 phosphate ABC transporter permease PstA low > 71
Mycobacterium tuberculosis H37Rv 0.33 Rv2995c Probable 3-isopropylmalate dehydrogenase LeuB (beta-IPM dehydrogenase) (IMDH) (3-IPM-DH) 0.24 Rv0930 Probable phosphate-transport integral membrane ABC transporter PstA1 — —
Methanococcus maripaludis JJ 0.31 MMJJ_RS02220 3-isopropylmalate dehydrogenase 0.20 MMJJ_RS08680 phosphate ABC transporter permease PstA — —
Lysobacter sp. OAE881 0.31 ABIE51_RS14200 isocitrate dehydrogenase 0.49 ABIE51_RS07535 phosphate ABC transporter permease PstA — —
Xanthomonas campestris pv. campestris strain 8004 0.31 Xcc-8004.4057.1 Isocitrate dehydrogenase [NAD] (EC 1.1.1.41) 0.45 Xcc-8004.3362.1 Phosphate transport system permease protein PstA (TC 3.A.1.7.1) — —
Shewanella oneidensis MR-1 0.29 SO1538 isocitrate dehydrogenase, NAD-dependent (NCBI ptt file) 0.18 SO4290 pstA phosphate ABC transporter, permease protein (NCBI ptt file) — —
Dyella japonica UNC79MFTsu3.2 0.29 ABZR86_RS00740 isocitrate dehydrogenase 0.44 ABZR86_RS08240 phosphate ABC transporter permease PstA — —
Rhodanobacter denitrificans MT42 0.28 LRK55_RS14765 isocitrate dehydrogenase 0.44 LRK55_RS00205 phosphate ABC transporter permease PstA — —
Rhodanobacter denitrificans FW104-10B01 0.28 LRK54_RS15050 isocitrate dehydrogenase 0.44 LRK54_RS00465 phosphate ABC transporter permease PstA — —
Rhodanobacter sp. FW510-T8 0.27 OKGIIK_03810 leuB isocitrate dehydrogenase 0.44 OKGIIK_06845 pstA phosphate ABC transporter permease PstA — —

Not shown: 12 genomes with orthologs for BPHYT_RS30235 only; 18 genomes with orthologs for BPHYT_RS14135 only