Conservation of cofitness between BPHYT_RS33780 and BPHYT_RS11190 in Burkholderia phytofirmans PsJN

56 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS33780 glycogen branching protein 1.0 BPHYT_RS11190 PrkA family serine protein kinase 0.37 8
Paraburkholderia graminis OAS925 0.94 ABIE53_004826 1,4-alpha-glucan branching enzyme 0.99 ABIE53_002318 serine protein kinase 0.61 9
Paraburkholderia bryophila 376MFSha3.1 0.94 H281DRAFT_06050 1,4-alpha-glucan branching enzyme 0.99 H281DRAFT_05232 putative serine protein kinase, PrkA low > 103
Paraburkholderia sabiae LMG 24235 0.84 QEN71_RS17730 1,4-alpha-glucan branching protein GlgB 0.97 QEN71_RS07375 PrkA family serine protein kinase low > 153
Ralstonia sp. UNC404CL21Col 0.62 ABZR87_RS17215 1,4-alpha-glucan branching protein GlgB 0.82 ABZR87_RS14220 PrkA family serine protein kinase low > 80
Pseudomonas sp. RS175 0.60 PFR28_01319 1,4-alpha-glucan branching enzyme GlgB 0.77 PFR28_04068 hypothetical protein low > 88
Pseudomonas fluorescens SBW25-INTG 0.60 PFLU_RS13485 1,4-alpha-glucan branching protein GlgB 0.77 PFLU_RS27485 PrkA family serine protein kinase low > 109
Pseudomonas fluorescens SBW25 0.60 PFLU_RS13485 1,4-alpha-glucan branching protein GlgB 0.77 PFLU_RS27485 PrkA family serine protein kinase low > 109
Pseudomonas putida KT2440 0.60 PP_4058 1,4-alpha-glucan branching enzyme 0.80 PP_0397 protein kinase 0.35 21
Pseudomonas fluorescens FW300-N2E2 0.60 Pf6N2E2_2117 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) 0.77 Pf6N2E2_4801 yeaG component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) low > 103
Pseudomonas simiae WCS417 0.60 PS417_12805 glycogen branching protein 0.77 PS417_25830 serine/threonine protein kinase 0.44 6
Pseudomonas fluorescens FW300-N2C3 0.60 AO356_01245 glycogen branching protein 0.77 AO356_14315 yeaG component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) low > 104
Pseudomonas fluorescens FW300-N2E3 0.60 AO353_22945 glycogen branching protein 0.77 AO353_07335 yeaG component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) low > 101
Pseudomonas fluorescens FW300-N1B4 0.59 Pf1N1B4_4678 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) 0.77 Pf1N1B4_2523 Serine protein kinase (prkA protein), P-loop containing low > 87
Pseudomonas syringae pv. syringae B728a ΔmexB 0.59 Psyr_2491 glycogen branching enzyme 0.79 Psyr_4631 PrkA serine kinase low > 86
Pseudomonas syringae pv. syringae B728a 0.59 Psyr_2491 glycogen branching enzyme 0.79 Psyr_4631 PrkA serine kinase 0.45 30
Herbaspirillum seropedicae SmR1 0.59 HSERO_RS12510 glycogen branching protein 0.91 HSERO_RS21690 PrkA family serine protein kinase low > 78
Pseudomonas fluorescens GW456-L13 0.58 PfGW456L13_3253 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) 0.77 PfGW456L13_1196 Serine protein kinase (prkA protein), P-loop containing low > 87
Rhizobium sp. OAE497 0.57 ABIE40_RS30590 1,4-alpha-glucan branching protein GlgB 0.69 ABIE40_RS12550 PrkA family serine protein kinase low > 107
Pseudomonas stutzeri RCH2 0.56 Psest_2158 alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase 0.80 Psest_3672 Putative Ser protein kinase low > 67
Pseudomonas sp. S08-1 0.56 OH686_01540 1,4-alpha-glucan branching enzyme 0.79 OH686_15020 Uncharacterized protein YeaG low > 80
Azospirillum sp. SherDot2 0.54 MPMX19_03849 1,4-alpha-glucan branching enzyme GlgB 0.70 MPMX19_02157 hypothetical protein
Pectobacterium carotovorum WPP14 0.53 HER17_RS01485 1,4-alpha-glucan branching enzyme 0.77 HER17_RS11150 protein kinase YeaG low > 75
Pantoea sp. MT58 0.53 IAI47_01680 1,4-alpha-glucan branching enzyme 0.77 IAI47_08925 protein kinase YeaG low > 76
Magnetospirillum magneticum AMB-1 0.53 AMB_RS15430 1,4-alpha-glucan branching protein GlgB 0.69 AMB_RS10885 PrkA family serine protein kinase
Enterobacter sp. TBS_079 0.53 MPMX20_04314 1,4-alpha-glucan branching enzyme GlgB 0.77 MPMX20_01840 hypothetical protein low > 85
Escherichia coli Nissle 1917 0.53 ECOLIN_RS19640 1,4-alpha-glucan branching enzyme 0.77 ECOLIN_RS09940 protein kinase YeaG low > 55
Escherichia coli ECOR38 0.53 HEPCGN_15700 glgB 1,4-alpha-glucan branching enzyme 0.77 HEPCGN_05100 yeaG protein kinase YeaG low > 87
Escherichia coli ECRC99 0.53 KEDOAH_11255 glgB 1,4-alpha-glucan branching enzyme 0.77 KEDOAH_01400 yeaG protein kinase YeaG
Escherichia coli ECRC100 0.53 OKFHMN_16885 glgB 1,4-alpha-glucan branching enzyme 0.77 OKFHMN_26710 yeaG protein kinase YeaG low > 80
Escherichia coli BW25113 0.53 b3432 glgB glycogen branching enzyme (NCBI) 0.77 b1783 yeaG yeaG component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) low > 76
Escherichia coli BL21 0.53 ECD_03284 1,4-alpha-glucan branching enzyme 0.74 ECD_01752 protein kinase, endogenous substrate unidentified; autokinase low > 61
Escherichia fergusonii Becca 0.53 EFB2_00387 1,4-alpha-glucan branching enzyme GlgB 0.77 EFB2_02211 hypothetical protein low > 86
Escherichia coli ECRC102 0.53 NIAGMN_14655 glgB 1,4-alpha-glucan branching enzyme 0.77 NIAGMN_01355 yeaG protein kinase YeaG
Escherichia coli HS(pFamp)R (ATCC 700891) 0.53 OHPLBJKB_00269 1,4-alpha-glucan branching enzyme GlgB 0.77 OHPLBJKB_01949 hypothetical protein low > 73
Escherichia coli ECRC62 0.53 BNILDI_02840 glgB 1,4-alpha-glucan branching enzyme 0.77 BNILDI_16025 yeaG protein kinase YeaG low > 75
Escherichia coli ECRC101 0.53 MCAODC_07415 glgB 1,4-alpha-glucan branching enzyme 0.77 MCAODC_18700 yeaG protein kinase YeaG low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.52 GFF575 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) 0.78 GFF3473 Serine protein kinase (prkA protein), P-loop containing low > 78
Escherichia coli ECRC98 0.52 JDDGAC_20515 glgB 1,4-alpha-glucan branching enzyme 0.77 JDDGAC_01285 yeaG protein kinase YeaG low > 86
Escherichia coli ECOR27 0.52 NOLOHH_08675 glgB 1,4-alpha-glucan branching enzyme 0.77 NOLOHH_17240 yeaG protein kinase YeaG low > 75
Enterobacter asburiae PDN3 0.52 EX28DRAFT_4115 alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase 0.77 EX28DRAFT_1776 putative serine protein kinase, PrkA low > 76
Rahnella sp. WP5 0.52 EX31_RS05025 1,4-alpha-glucan branching enzyme 0.76 EX31_RS06260 protein kinase YeaG low > 89
Klebsiella michiganensis M5al 0.52 BWI76_RS26215 glycogen-branching enzyme 0.77 BWI76_RS11485 serine protein kinase PrkA low > 92
Serratia liquefaciens MT49 0.52 IAI46_23940 1,4-alpha-glucan branching protein GlgB 0.76 IAI46_14375 protein kinase YeaG low > 86
Dickeya dianthicola 67-19 0.52 HGI48_RS19855 1,4-alpha-glucan branching protein GlgB 0.76 HGI48_RS10255 PrkA family serine protein kinase low > 71
Dickeya dianthicola ME23 0.52 DZA65_RS20930 1,4-alpha-glucan branching protein GlgB 0.77 DZA65_RS10730 PrkA family serine protein kinase low > 75
Variovorax sp. OAS795 0.52 ABID97_RS04550 1,4-alpha-glucan branching protein GlgB 0.88 ABID97_RS10270 PrkA family serine protein kinase low > 91
Variovorax sp. SCN45 0.51 GFF6333 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) 0.87 GFF2932 Uncharacterized protein YeaG low > 127
Dickeya dadantii 3937 0.50 DDA3937_RS19745 1,4-alpha-glucan branching protein GlgB 0.76 DDA3937_RS10245 PrkA family serine protein kinase low > 74
Sinorhizobium meliloti 1021 0.50 SMc03922 glycogen branching protein 0.68 SMc01267 hypothetical protein low > 103
Shewanella oneidensis MR-1 0.49 SO1494 glgB 1,4-alpha-glucan branching enzyme (NCBI ptt file) 0.76 SO2882 yeaG component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) low > 76
Shewanella sp. ANA-3 0.48 Shewana3_2934 glycogen branching enzyme (RefSeq) 0.76 Shewana3_1638 putative serine protein kinase, PrkA (RefSeq) low > 73
Shewanella loihica PV-4 0.48 Shew_1168 glycogen branching enzyme (RefSeq) 0.77 Shew_1833 putative serine protein kinase, PrkA (RefSeq) 0.30 39
Shewanella amazonensis SB2B 0.48 Sama_2453 1,4-alpha-glucan branching enzyme (RefSeq) 0.77 Sama_1921 yeaG component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) low > 62
Vibrio cholerae E7946 ATCC 55056 0.45 CSW01_14125 1,4-alpha-glucan branching enzyme 0.77 CSW01_09380 PrkA family serine protein kinase low > 62
Alteromonas macleodii MIT1002 0.45 MIT1002_02399 1,4-alpha-glucan branching enzyme GlgB 0.80 MIT1002_01233 PrkA family serine protein kinase
Marinobacter adhaerens HP15 0.43 HP15_1712 glycogen branching enzyme 0.78 HP15_2933 serine protein kinase, PrkA low > 73

Not shown: 22 genomes with orthologs for BPHYT_RS33780 only; 6 genomes with orthologs for BPHYT_RS11190 only