Conservation of cofitness between BPHYT_RS27940 and BPHYT_RS02905 in Burkholderia phytofirmans PsJN

57 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS27940 FAD-binding protein 1.0 BPHYT_RS02905 RNA polymerase subunit sigma-54 0.22 11
Paraburkholderia bryophila 376MFSha3.1 0.86 H281DRAFT_01197 NADPH-dependent ferric siderophore reductase, contains FAD-binding and SIP domains 0.95 H281DRAFT_01927 RNA polymerase, sigma 54 subunit, RpoN/SigL low > 103
Paraburkholderia graminis OAS925 0.79 ABIE53_005751 NADPH-dependent ferric siderophore reductase 0.94 ABIE53_000718 RNA polymerase sigma-54 factor low > 113
Paraburkholderia sabiae LMG 24235 0.76 QEN71_RS12350 siderophore-interacting protein 0.89 QEN71_RS01755 RNA polymerase factor sigma-54 low > 153
Cupriavidus basilensis FW507-4G11 0.61 RR42_RS28530 FAD-binding protein 0.64 RR42_RS02085 RNA polymerase subunit sigma-54 low > 128
Variovorax sp. SCN45 0.48 GFF4649 Iron-chelator utilization protein 0.42 GFF6290 RNA polymerase sigma-54 factor RpoN low > 127
Variovorax sp. OAS795 0.48 ABID97_RS20800 siderophore-interacting protein 0.43 ABID97_RS04780 RNA polymerase factor sigma-54
Hydrogenophaga sp. GW460-11-11-14-LB1 0.45 GFF5472 iron-chelator utilization protein 0.43 GFF3068 RNA polymerase sigma-54 factor RpoN low > 90
Acidovorax sp. GW101-3H11 0.42 Ac3H11_3379 iron-chelator utilization protein 0.43 Ac3H11_727 RNA polymerase sigma-54 factor RpoN
Pseudomonas syringae pv. syringae B728a ΔmexB 0.38 Psyr_3927 Siderophore-interacting protein 0.40 Psyr_4147 RNA polymerase, sigma 54 subunit, RpoN/SigL
Pseudomonas syringae pv. syringae B728a 0.38 Psyr_3927 Siderophore-interacting protein 0.40 Psyr_4147 RNA polymerase, sigma 54 subunit, RpoN/SigL
Pseudomonas fluorescens FW300-N2E3 0.38 AO353_16065 FAD-binding protein 0.40 AO353_05180 RNA polymerase sigma-54 factor
Pseudomonas fluorescens SBW25 0.38 PFLU_RS05405 siderophore-interacting protein 0.40 PFLU_RS04400 RNA polymerase factor sigma-54
Pseudomonas fluorescens SBW25-INTG 0.38 PFLU_RS05405 siderophore-interacting protein 0.40 PFLU_RS04400 RNA polymerase factor sigma-54
Pseudomonas simiae WCS417 0.37 PS417_05365 FAD-binding protein 0.40 PS417_04345 RNA polymerase factor sigma-54
Pseudomonas putida KT2440 0.36 PP_1056 putative Iron-chelator utilization protein 0.40 PP_0952 RNA polymerase sigma-54 factor
Pseudomonas fluorescens FW300-N2E2 0.36 Pf6N2E2_5446 iron-chelator utilization protein 0.38 Pf6N2E2_3267 RNA polymerase sigma-54 factor RpoN
Pseudomonas fluorescens FW300-N2C3 0.36 AO356_17615 FAD-binding protein 0.39 AO356_07035 RNA polymerase sigma-54 factor
Pseudomonas fluorescens GW456-L13 0.36 PfGW456L13_4801 iron-chelator utilization protein 0.39 PfGW456L13_5014 RNA polymerase sigma-54 factor RpoN
Pseudomonas fluorescens FW300-N1B4 0.36 Pf1N1B4_815 iron-chelator utilization protein 0.39 Pf1N1B4_1080 RNA polymerase sigma-54 factor RpoN
Pseudomonas sp. RS175 0.33 PFR28_03500 NADPH-dependent ferric-chelate reductase 0.39 PFR28_00173 RNA polymerase sigma-54 factor
Xanthomonas campestris pv. campestris strain 8004 0.32 Xcc-8004.732.1 iron-chelator utilization protein 0.34 Xcc-8004.1662.1 RNA polymerase sigma-54 factor RpoN low > 74
Rhizobium sp. OAE497 0.29 ABIE40_RS05060 siderophore-interacting protein 0.27 ABIE40_RS01860 RNA polymerase factor sigma-54 low > 107
Dyella japonica UNC79MFTsu3.2 0.29 ABZR86_RS21135 siderophore-interacting protein 0.36 ABZR86_RS19815 RNA polymerase factor sigma-54 low > 74
Rahnella sp. WP5 0.28 EX31_RS00515 siderophore-interacting protein 0.40 EX31_RS12400 RNA polymerase factor sigma-54 low > 89
Pantoea sp. MT58 0.27 IAI47_03495 siderophore-interacting protein 0.40 IAI47_17185 RNA polymerase factor sigma-54 low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.26 GFF3179 iron-chelator utilization protein 0.40 GFF2946 RNA polymerase sigma-54 factor RpoN low > 78
Enterobacter sp. TBS_079 0.26 MPMX20_03978 NADPH-dependent ferric-chelate reductase 0.38 MPMX20_04108 RNA polymerase sigma-54 factor
Escherichia coli Nissle 1917 0.25 ECOLIN_RS17720 NADPH-dependent ferric chelate reductase NfeF 0.40 ECOLIN_RS18425 RNA polymerase factor sigma-54
Escherichia coli HS(pFamp)R (ATCC 700891) 0.25 OHPLBJKB_00632 NADPH-dependent ferric-chelate reductase 0.40 OHPLBJKB_00498 RNA polymerase sigma-54 factor
Escherichia coli ECOR38 0.25 HEPCGN_17490 nfeF NADPH-dependent ferric chelate reductase 0.40 HEPCGN_16815 rpoN RNA polymerase factor sigma-54
Enterobacter asburiae PDN3 0.25 EX28DRAFT_3136 Siderophore-interacting protein 0.40 EX28DRAFT_3256 RNA polymerase, sigma 54 subunit, RpoN/SigL
Escherichia coli ECRC98 0.25 JDDGAC_22275 nfeF NADPH-dependent ferric chelate reductase 0.40 JDDGAC_21565 rpoN RNA polymerase factor sigma-54
Escherichia coli ECRC102 0.25 NIAGMN_16405 nfeF NADPH-dependent ferric chelate reductase 0.40 NIAGMN_15700 rpoN RNA polymerase factor sigma-54
Escherichia coli ECOR27 0.25 NOLOHH_10430 nfeF NADPH-dependent ferric chelate reductase 0.40 NOLOHH_09740 rpoN RNA polymerase factor sigma-54
Escherichia coli BW25113 0.25 b3070 yqjH predicted siderophore interacting protein (NCBI) 0.40 b3202 rpoN DNA-directed RNA polymerase subunit N (NCBI)
Escherichia coli ECRC99 0.25 KEDOAH_09505 nfeF NADPH-dependent ferric chelate reductase 0.40 KEDOAH_10210 rpoN RNA polymerase factor sigma-54
Escherichia coli ECRC101 0.25 MCAODC_09155 nfeF NADPH-dependent ferric chelate reductase 0.40 MCAODC_08460 rpoN RNA polymerase factor sigma-54
Escherichia coli ECRC62 0.25 BNILDI_01085 nfeF NADPH-dependent ferric chelate reductase 0.40 BNILDI_01795 rpoN RNA polymerase factor sigma-54
Escherichia coli BL21 0.25 ECD_02939 putative siderophore interacting protein 0.40 ECD_03067 RNA polymerase, sigma 54 (sigma N) factor low > 61
Escherichia coli ECRC100 0.25 OKFHMN_18640 nfeF NADPH-dependent ferric chelate reductase 0.40 OKFHMN_17940 rpoN RNA polymerase factor sigma-54
Escherichia fergusonii Becca 0.25 EFB2_00741 NADPH-dependent ferric-chelate reductase 0.40 EFB2_00621 RNA polymerase sigma-54 factor
Pectobacterium carotovorum WPP14 0.24 HER17_RS09740 siderophore-interacting protein 0.39 HER17_RS20060 RNA polymerase factor sigma-54 low > 75
Klebsiella michiganensis M5al 0.24 BWI76_RS24615 siderophore-interacting protein 0.39 BWI76_RS25265 RNA polymerase factor sigma-54
Vibrio cholerae E7946 ATCC 55056 0.23 CSW01_11275 NADPH-dependent ferric siderophore reductase 0.38 CSW01_12815 RNA polymerase sigma-54 factor low > 62
Serratia liquefaciens MT49 0.23 IAI46_15685 siderophore-interacting protein 0.39 IAI46_22470 RNA polymerase factor sigma-54
Shewanella sp. ANA-3 0.21 Shewana3_0097 FAD-binding 9, siderophore-interacting domain-containing protein (RefSeq) 0.36 Shewana3_0672 RNA polymerase factor sigma-54 (RefSeq) low > 73
Alteromonas macleodii MIT1002 0.21 MIT1002_03868 Vibriobactin utilization protein ViuB 0.40 MIT1002_00827 RNA polymerase sigma-54 factor 2 low > 70
Agrobacterium fabrum C58 0.20 Atu5313 hypothetical protein 0.29 Atu0332 RNA polymerase sigma-54 factor
Dickeya dianthicola ME23 0.19 DZA65_RS19225 siderophore-interacting protein 0.39 DZA65_RS01510 RNA polymerase factor sigma-54 low > 75
Dickeya dianthicola 67-19 0.18 HGI48_RS18075 siderophore-interacting protein 0.39 HGI48_RS01445 RNA polymerase factor sigma-54 low > 71
Dickeya dadantii 3937 0.18 DDA3937_RS18135 siderophore-interacting protein 0.39 DDA3937_RS01530 RNA polymerase factor sigma-54 low > 74
Rhodopseudomonas palustris CGA009 0.18 TX73_019165 siderophore-interacting protein 0.26 TX73_000260 RNA polymerase factor sigma-54 low > 86
Ralstonia solanacearum GMI1000 0.17 RS_RS18395 siderophore-interacting protein 0.66 RS_RS02020 RNA polymerase sigma-54 factor low > 80
Ralstonia solanacearum PSI07 0.17 RPSI07_RS00990 siderophore-interacting protein 0.65 RPSI07_RS22130 RNA polymerase factor sigma-54 low > 81
Ralstonia solanacearum IBSBF1503 0.17 RALBFv3_RS22210 siderophore-interacting protein 0.66 RALBFv3_RS11170 RNA polymerase sigma-54 factor low > 76
Ralstonia solanacearum UW163 0.17 UW163_RS22755 siderophore-interacting protein 0.66 UW163_RS02410 RNA polymerase sigma-54 factor
Ralstonia sp. UNC404CL21Col 0.16 ABZR87_RS17305 siderophore-interacting protein 0.67 ABZR87_RS07060 RNA polymerase factor sigma-54 low > 80

Not shown: 1 genomes with orthologs for BPHYT_RS27940 only; 36 genomes with orthologs for BPHYT_RS02905 only