Conservation of cofitness between B158DRAFT_2275 and B158DRAFT_2448 in Kangiella aquimarina DSM 16071

55 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Kangiella aquimarina DSM 16071 1.0 B158DRAFT_2275 23S rRNA (uracil-5-)-methyltransferase RumA 1.0 B158DRAFT_2448 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 0.44 10
Marinobacter adhaerens HP15 0.54 HP15_790 23S rRNA 5-methyluridine methyltransferase 0.46 HP15_746 two component transcriptional regulator, winged helix family low > 73
Dyella japonica UNC79MFTsu3.2 0.42 ABZR86_RS07120 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.44 ABZR86_RS19120 response regulator low > 74
Acinetobacter radioresistens SK82 0.41 MPMX26_00538 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.49 MPMX26_02559 Transcriptional regulatory protein RstA — —
Cupriavidus basilensis FW507-4G11 0.40 RR42_RS13170 23S rRNA methyltransferase 0.34 RR42_RS14260 transcriptional regulator low > 128
Vibrio cholerae E7946 ATCC 55056 0.38 CSW01_12410 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.42 CSW01_06665 DNA-binding response regulator low > 62
Paraburkholderia sabiae LMG 24235 0.38 QEN71_RS22225 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.40 QEN71_RS35010 response regulator low > 153
Ralstonia sp. UNC404CL21Col 0.38 ABZR87_RS10885 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.40 ABZR87_RS03100 response regulator transcription factor low > 80
Ralstonia solanacearum GMI1000 0.38 RS_RS06055 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.40 RS_RS15395 DNA-binding response regulator — —
Ralstonia solanacearum IBSBF1503 0.38 RALBFv3_RS15245 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.40 RALBFv3_RS07455 DNA-binding response regulator low > 76
Ralstonia solanacearum UW163 0.38 UW163_RS12710 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.40 UW163_RS06165 DNA-binding response regulator — —
Pectobacterium carotovorum WPP14 0.37 HER17_RS04110 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.37 HER17_RS09695 two-component system response regulator RstA low > 75
Pseudomonas fluorescens SBW25-INTG 0.37 PFLU_RS22100 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.45 PFLU_RS23150 response regulator low > 109
Pseudomonas fluorescens SBW25 0.37 PFLU_RS22100 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.45 PFLU_RS23150 response regulator low > 109
Dechlorosoma suillum PS 0.37 Dsui_1981 23S rRNA (uracil-5-)-methyltransferase RumA 0.47 Dsui_1529 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain low > 51
Rahnella sp. WP5 0.36 EX31_RS07960 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.34 EX31_RS06520 two-component system response regulator RstA low > 89
Pseudomonas simiae WCS417 0.36 PS417_20155 23S rRNA methyltransferase 0.44 PS417_21535 chemotaxis protein CheY low > 88
Escherichia coli ECRC101 0.36 MCAODC_10770 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.36 MCAODC_17745 rstA two-component system response regulator RstA low > 87
Escherichia coli ECRC99 0.36 KEDOAH_07885 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.36 KEDOAH_00440 rstA two-component system response regulator RstA — —
Escherichia coli ECRC98 0.36 JDDGAC_23910 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.36 JDDGAC_02255 rstA two-component system response regulator RstA low > 86
Escherichia coli ECRC102 0.36 NIAGMN_18015 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.36 NIAGMN_00410 rstA two-component system response regulator RstA — —
Escherichia coli ECRC100 0.36 OKFHMN_20245 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.36 OKFHMN_27665 rstA two-component system response regulator RstA — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.36 OHPLBJKB_00946 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.36 OHPLBJKB_02118 Transcriptional regulatory protein RstA low > 73
Escherichia coli BW25113 0.36 b2785 rumA 23S rRNA (uracil-5-)-methyltransferase (NCBI) 0.36 b1608 rstA DNA-binding response regulator in two-component regulatory system with RstB (RefSeq) low > 76
Pseudomonas stutzeri RCH2 0.36 Psest_1639 23S rRNA (uracil-5-)-methyltransferase RumA 0.42 Psest_2730 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain low > 67
Dickeya dadantii 3937 0.36 DDA3937_RS17020 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.39 DDA3937_RS12230 two-component system response regulator RstA low > 74
Serratia liquefaciens MT49 0.36 IAI46_03595 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.34 IAI46_13300 two-component system response regulator RstA low > 86
Escherichia coli ECOR38 0.36 HEPCGN_19495 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.36 HEPCGN_06040 rstA two-component system response regulator RstA low > 87
Escherichia coli ECRC62 0.36 BNILDI_10625 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.36 BNILDI_16960 rstA two-component system response regulator RstA low > 75
Escherichia coli Nissle 1917 0.36 ECOLIN_RS15520 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.36 ECOLIN_RS08980 two-component system response regulator RstA — —
Enterobacter sp. TBS_079 0.35 MPMX20_03654 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.35 MPMX20_02026 Transcriptional regulatory protein RstA low > 85
Escherichia coli BL21 0.35 ECD_02630 23S rRNA m(5)U1939 methyltransferase, SAM-dependent 0.36 ECD_01577 response regulator of RstAB two-component system low > 61
Escherichia coli ECOR27 0.35 NOLOHH_12120 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.36 NOLOHH_18170 rstA two-component system response regulator RstA — —
Escherichia fergusonii Becca 0.35 EFB2_01132 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.35 EFB2_02384 Transcriptional regulatory protein RstA low > 86
Dickeya dianthicola ME23 0.35 DZA65_RS18150 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.37 DZA65_RS12760 two-component system response regulator RstA low > 75
Pseudomonas fluorescens FW300-N1B4 0.35 Pf1N1B4_3507 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) ## LSU rRNA m(5)U1939 0.45 Pf1N1B4_3478 Transcriptional regulatory protein RstA low > 87
Dickeya dianthicola 67-19 0.35 HGI48_RS17075 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.37 HGI48_RS12320 two-component system response regulator RstA low > 71
Pseudomonas sp. S08-1 0.34 OH686_18955 23S rRNA (uracil-5-)-methyltransferase RumA 0.47 OH686_20345 Two-component transcriptional response regulator, OmpR family low > 80
Pseudomonas fluorescens FW300-N2C3 0.34 AO356_19055 23S rRNA methyltransferase 0.46 AO356_18940 chemotaxis protein CheY low > 104
Pseudomonas fluorescens FW300-N2E2 0.34 Pf6N2E2_5722 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) ## LSU rRNA m(5)U1939 0.46 Pf6N2E2_5699 Transcriptional regulatory protein RstA low > 103
Shewanella sp. ANA-3 0.34 Shewana3_1110 rumA 23S rRNA 5-methyluridine methyltransferase (RefSeq) 0.39 Shewana3_3184 two component transcriptional regulator (RefSeq) low > 73
Enterobacter asburiae PDN3 0.34 EX28DRAFT_2865 23S rRNA (uracil-5-)-methyltransferase RumA 0.35 EX28DRAFT_1549 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain low > 76
Pantoea sp. MT58 0.34 IAI47_04115 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.34 IAI47_09545 two-component system response regulator RstA low > 76
Pseudomonas fluorescens FW300-N2E3 0.34 AO353_02715 23S rRNA methyltransferase 0.45 AO353_02835 chemotaxis protein CheY low > 101
Pseudomonas syringae pv. syringae B728a 0.34 Psyr_3696 23S rRNA m(5)U-1939 methyltransferase 0.43 Psyr_3716 Response regulator receiver:Transcriptional regulatory protein, C-terminal low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.34 Psyr_3696 23S rRNA m(5)U-1939 methyltransferase 0.43 Psyr_3716 Response regulator receiver:Transcriptional regulatory protein, C-terminal low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.34 GFF4838 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) 0.36 GFF1800 Transcriptional regulatory protein RstA low > 78
Shewanella oneidensis MR-1 0.33 SO3456 RNA methyltransferase, TrmA family (NCBI ptt file) 0.39 SO3594 transcriptional regulatory protein RstA, putative (NCBI ptt file) low > 76
Pseudomonas sp. RS175 0.33 PFR28_03224 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.46 PFR28_03249 Transcriptional regulatory protein RstA low > 88
Pseudomonas fluorescens GW456-L13 0.33 PfGW456L13_2033 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) ## LSU rRNA m(5)U1939 0.46 PfGW456L13_2007 Transcriptional regulatory protein RstA low > 87
Pseudomonas putida KT2440 0.33 PP_1655 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.47 PP_1181 DNA-binding response regulator low > 96
Erwinia tracheiphila SCR3 0.32 LU632_RS06345 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.33 LU632_RS11455 rstA two-component system response regulator RstA low > 74
Klebsiella michiganensis M5al 0.32 BWI76_RS22810 23S rRNA (uracil(1939)-C(5))-methyltransferase 0.35 BWI76_RS16250 DNA-binding response regulator low > 92
Shewanella amazonensis SB2B 0.31 Sama_1032 rumA 23S rRNA 5-methyluridine methyltransferase (RefSeq) 0.47 Sama_0437 response regulator receiver protein (RefSeq) low > 62
Shewanella loihica PV-4 0.31 Shew_1201 rumA 23S rRNA 5-methyluridine methyltransferase (RefSeq) 0.47 Shew_2206 two component transcriptional regulator (RefSeq) low > 60
Mucilaginibacter yixingensis YX-36 DSM 26809 0.15 ABZR88_RS21250 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD 0.29 ABZR88_RS03745 response regulator transcription factor low > 71

Not shown: 40 genomes with orthologs for B158DRAFT_2275 only; 0 genomes with orthologs for B158DRAFT_2448 only