Conservation of cofitness between Atu4166 and Atu4617 in Agrobacterium fabrum C58

48 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Agrobacterium fabrum C58 1.0 Atu4166 UDP-glucose 4-epimerase 1.0 Atu4617 dTDP-D-glucose-4,6-dehydratase 0.88 3
Rhizobium sp. OAE497 0.81 ABIE40_RS18880 UDP-glucose 4-epimerase GalE 0.79 ABIE40_RS08670 dTDP-glucose 4,6-dehydratase low > 107
Sinorhizobium meliloti 1021 0.80 SM_b20942 UDP glucose 4-epimerase 0.57 SM_b21326 dTDP-D-glucose 4,6-dehydratase low > 103
Caulobacter crescentus NA1000 0.63 CCNA_02466 UDP-glucose 4-epimerase 0.67 CCNA_03744 dTDP-glucose 4,6-dehydratase low > 66
Caulobacter crescentus NA1000 Δfur 0.63 CCNA_02466 UDP-glucose 4-epimerase 0.67 CCNA_03744 dTDP-glucose 4,6-dehydratase low > 67
Synechococcus elongatus PCC 7942 0.57 Synpcc7942_0320 galE UDP-galactose 4-epimerase 0.62 Synpcc7942_2100 rfbB dTDP-glucose 4,6-dehydratase
Phaeobacter inhibens DSM 17395 0.51 PGA1_c34470 UDP-glucose 4-epimerase ExoB 0.59 PGA1_65p00240 dTDP-glucose 4,6-dehydratase RffG 0.30 56
Pseudomonas fluorescens FW300-N2E3 0.49 AO353_21135 UDP-galactose-4-epimerase 0.67 AO353_11885 dTDP-glucose 4,6-dehydratase
Desulfovibrio vulgaris Hildenborough JW710 0.47 DVU1360 galE UDP-glucose 4-epimerase (TIGR) 0.41 DVU1364 rfbB dTDP-glucose 4,6-dehydratase (TIGR)
Azospirillum sp. SherDot2 0.46 MPMX19_04151 UDP-glucose 4-epimerase 0.66 MPMX19_06725 dTDP-glucose 4,6-dehydratase 2
Pseudomonas putida KT2440 0.45 PP_3129 UDP-glucose 4-epimerase 0.58 PP_1785 dTDP-glucose 4,6-dehydratase 2
Desulfovibrio vulgaris Miyazaki F 0.43 DvMF_0137 UDP-glucose 4-epimerase (RefSeq) 0.43 DvMF_0141 dTDP-glucose 4,6-dehydratase (RefSeq)
Fusobacterium nucleatum SB010 0.42 HUW76_00075 UDP-glucose 4-epimerase GalE 0.43 HUW76_01440 dTDP-glucose 4,6-dehydratase
Lysobacter sp. OAE881 0.39 ABIE51_RS07955 UDP-glucose 4-epimerase GalE 0.52 ABIE51_RS15620 dTDP-glucose 4,6-dehydratase low > 62
Acinetobacter radioresistens SK82 0.38 MPMX26_00066 UDP-glucose 4-epimerase 0.61 MPMX26_00450 dTDP-glucose 4,6-dehydratase 2 low > 36
Echinicola vietnamensis KMM 6221, DSM 17526 0.38 Echvi_1472 UDP-glucose 4-epimerase (EC 5.1.3.2) (from data) 0.51 Echvi_2329 dTDP-glucose 4,6-dehydratase
Herbaspirillum seropedicae SmR1 0.38 HSERO_RS10045 UDP-glucose 4-epimerase 0.53 HSERO_RS22050 spore coat protein
Variovorax sp. OAS795 0.38 ABID97_RS05765 UDP-glucose 4-epimerase GalE 0.57 ABID97_RS05660 dTDP-glucose 4,6-dehydratase
Xanthomonas campestris pv. campestris strain 8004 0.38 Xcc-8004.4678.1 UDP-glucose 4-epimerase (EC 5.1.3.2) 0.56 Xcc-8004.4486.1 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) low > 74
Ralstonia solanacearum GMI1000 0.38 RS_RS22435 UDP-glucose 4-epimerase GalE 0.59 RS_RS03430 dTDP-glucose 4,6-dehydratase
Ralstonia solanacearum PSI07 0.38 RPSI07_RS05120 UDP-glucose 4-epimerase GalE 0.60 RPSI07_RS20615 dTDP-glucose 4,6-dehydratase
Dickeya dadantii 3937 0.38 DDA3937_RS06615 UDP-glucose 4-epimerase GalE 0.68 DDA3937_RS06735 dTDP-glucose 4,6-dehydratase low > 74
Pontibacter actiniarum KMM 6156, DSM 19842 0.38 CA264_17905 UDP-glucose 4-epimerase GalE 0.52 CA264_17910 dTDP-glucose 4,6-dehydratase
Ralstonia solanacearum UW163 0.38 UW163_RS20695 UDP-glucose 4-epimerase GalE 0.60 UW163_RS00920 dTDP-glucose 4,6-dehydratase
Paraburkholderia graminis OAS925 0.38 ABIE53_001185 UDP-glucose 4-epimerase 0.59 ABIE53_001137 dTDP-glucose 4,6-dehydratase
Dickeya dianthicola 67-19 0.38 HGI48_RS06635 UDP-glucose 4-epimerase GalE 0.68 HGI48_RS06755 dTDP-glucose 4,6-dehydratase low > 71
Ralstonia solanacearum IBSBF1503 0.38 RALBFv3_RS18435 UDP-glucose 4-epimerase GalE 0.60 RALBFv3_RS12645 dTDP-glucose 4,6-dehydratase
Dickeya dianthicola ME23 0.37 DZA65_RS06990 UDP-glucose 4-epimerase GalE 0.68 DZA65_RS07110 dTDP-glucose 4,6-dehydratase 0.52 40
Burkholderia phytofirmans PsJN 0.37 BPHYT_RS04450 UDP-glucose 4-epimerase 0.59 BPHYT_RS04265 dTDP-glucose 4,6-dehydratase
Paraburkholderia sabiae LMG 24235 0.37 QEN71_RS25435 UDP-glucose 4-epimerase GalE 0.58 QEN71_RS25755 dTDP-glucose 4,6-dehydratase
Paraburkholderia bryophila 376MFSha3.1 0.37 H281DRAFT_00074 UDP-galactose 4-epimerase 0.59 H281DRAFT_04822 dTDP-glucose 4,6-dehydratase
Cupriavidus basilensis FW507-4G11 0.37 RR42_RS35875 UDP-galactose-4-epimerase 0.57 RR42_RS15840 spore coat protein
Alteromonas macleodii MIT1002 0.37 MIT1002_00970 UDP-glucose 4-epimerase 0.64 MIT1002_03557 dTDP-glucose 4,6-dehydratase
Bacteroides ovatus ATCC 8483 0.36 BACOVA_02242 UDP-glucose 4-epimerase 0.49 BACOVA_03743 dTDP-glucose 4,6-dehydratase
Ralstonia sp. UNC404CL21Col 0.36 ABZR87_RS19470 UDP-glucose 4-epimerase GalE 0.59 ABZR87_RS08645 dTDP-glucose 4,6-dehydratase low > 80
Bacteroides thetaiotaomicron VPI-5482 0.36 BT0623 putative UDP-glucose 4-epimerase (NCBI ptt file) 0.49 BT0466 dTDP-glucose 4,6-dehydratase (NCBI ptt file)
Bacteroides stercoris CC31F 0.36 HMPREF1181_RS15095 UDP-glucose 4-epimerase GalE 0.46 HMPREF1181_RS08020 dTDP-glucose 4,6-dehydratase
Hydrogenophaga sp. GW460-11-11-14-LB1 0.36 GFF3323 UDP-glucose 4-epimerase (EC 5.1.3.2) 0.56 GFF1837 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)
Variovorax sp. SCN45 0.36 GFF68 UDP-glucose 4-epimerase (EC 5.1.3.2) 0.57 GFF6882 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)
Pseudomonas fluorescens FW300-N1B4 0.36 Pf1N1B4_5092 UDP-glucose 4-epimerase (EC 5.1.3.2) 0.67 Pf1N1B4_5939 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46)
Phocaeicola vulgatus CL09T03C04 0.36 HMPREF1058_RS06310 UDP-glucose 4-epimerase GalE 0.47 HMPREF1058_RS02350 dTDP-glucose 4,6-dehydratase
Phocaeicola dorei CL03T12C01 0.36 ABI39_RS20070 UDP-glucose 4-epimerase GalE 0.53 ABI39_RS13370 dTDP-glucose 4,6-dehydratase low > 72
Parabacteroides merdae CL09T00C40 0.35 HMPREF1078_RS15420 UDP-glucose 4-epimerase GalE 0.48 HMPREF1078_RS00705 dTDP-glucose 4,6-dehydratase
Mucilaginibacter yixingensis YX-36 DSM 26809 0.35 ABZR88_RS08705 UDP-glucose 4-epimerase GalE 0.54 ABZR88_RS17425 dTDP-glucose 4,6-dehydratase
Dinoroseobacter shibae DFL-12 0.34 Dshi_3868 UDP-glucose 4-epimerase (RefSeq) 0.61 Dshi_4115 dTDP-glucose 4,6-dehydratase (RefSeq) 0.73 1
Pseudomonas syringae pv. syringae B728a ΔmexB 0.34 Psyr_2704 UDP-galactose 4-epimerase 0.65 Psyr_4935 dTDP-glucose 4,6-dehydratase low > 86
Pseudomonas syringae pv. syringae B728a 0.34 Psyr_2704 UDP-galactose 4-epimerase 0.65 Psyr_4935 dTDP-glucose 4,6-dehydratase low > 86
Pedobacter sp. GW460-11-11-14-LB5 0.34 CA265_RS25430 UDP-glucose 4-epimerase GalE 0.52 CA265_RS19340 dTDP-glucose 4,6-dehydratase
Pseudomonas simiae WCS417 0.20 PS417_01385 NAD-dependent dehydratase 0.67 PS417_01330 dTDP-glucose 4,6-dehydratase

Not shown: 3 genomes with orthologs for Atu4166 only; 50 genomes with orthologs for Atu4617 only