Conservation of cofitness between Atu3181 and Atu3997 in Agrobacterium fabrum C58

53 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Agrobacterium fabrum C58 1.0 Atu3181 hypothetical protein 1.0 Atu3997 biotin synthetase 0.21 17
Rhizobium sp. OAE497 0.83 ABIE40_RS10955 zinc metallochaperone GTPase ZigA 0.68 ABIE40_RS21075 biotin synthase BioB low > 107
Rhodopseudomonas palustris CGA009 0.71 TX73_007510 GTP-binding protein 0.61 TX73_010535 biotin synthase BioB low > 86
Xanthobacter sp. DMC5 0.68 GFF1508 Putative metal chaperone YciC 0.49 GFF256 Biotin synthase — —
Herbaspirillum seropedicae SmR1 0.59 HSERO_RS12720 hypothetical protein 0.52 HSERO_RS12235 biotin synthase low > 78
Variovorax sp. SCN45 0.59 GFF7058 Zinc-binding GTPase YciC 0.53 GFF937 Biotin synthase (EC 2.8.1.6) low > 127
Phaeobacter inhibens DSM 17395 0.59 PGA1_c20610 putative metal chaperone 0.67 PGA1_c09120 biotin synthase BioB low > 62
Methylophilus sp. DMC18 0.57 GFF601 Putative metal chaperone YciC 0.54 GFF1682 Biotin synthase — —
Pectobacterium carotovorum WPP14 0.56 HER17_RS10375 zinc metallochaperone GTPase ZigA 0.61 HER17_RS13460 biotin synthase BioB low > 75
Acinetobacter baumannii LAC-4 0.56 RR41_RS00360 zinc metallochaperone GTPase ZigA 0.58 RR41_RS11800 biotin synthase BioB — —
Pantoea agglomerans CFBP13505 P0401 0.55 PagCFBP13505_RS07270 GTP-binding protein 0.62 PagCFBP13505_RS03770 biotin synthase BioB low > 74
Pseudomonas fluorescens FW300-N2C3 0.54 AO356_11940 4-hydroxytetrahydrobiopterin dehydratase 0.60 AO356_14135 biotin synthase low > 104
Pantoea sp. MT58 0.54 IAI47_21320 GTP-binding protein 0.62 IAI47_13530 biotin synthase BioB low > 76
Pseudomonas fluorescens FW300-N2E2 0.54 Pf6N2E2_4263 Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family 0.60 Pf6N2E2_4759 Biotin synthase (EC 2.8.1.6) low > 103
Pseudomonas sp. RS175 0.54 PFR28_04533 Putative metal chaperone YciC 0.59 PFR28_04103 Biotin synthase low > 88
Pseudomonas sp. DMC3 0.54 GFF522 Putative metal chaperone YciC 0.60 GFF76 Biotin synthase low > 89
Alteromonas macleodii MIT1002 0.53 MIT1002_02552 Putative metal chaperone YciC 0.58 MIT1002_01379 Biotin synthase low > 70
Pseudomonas fluorescens SBW25-INTG 0.53 PFLU_RS29950 GTP-binding protein 0.60 PFLU_RS27650 biotin synthase BioB low > 109
Pseudomonas simiae WCS417 0.53 PS417_28285 hypothetical protein 0.59 PS417_26005 biotin synthase low > 88
Pseudomonas fluorescens SBW25 0.53 PFLU_RS29950 GTP-binding protein 0.60 PFLU_RS27650 biotin synthase BioB low > 109
Pseudomonas lactucae CFBP13502 0.53 GEMAOFIL_00125 Putative metal chaperone YciC 0.59 GEMAOFIL_05322 Biotin synthase low > 96
Pseudomonas fluorescens FW300-N1B4 0.53 Pf1N1B4_1994 Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family 0.60 Pf1N1B4_2487 Biotin synthase (EC 2.8.1.6) low > 87
Pseudomonas fluorescens GW456-L13 0.53 PfGW456L13_713 Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family 0.60 PfGW456L13_1147 Biotin synthase (EC 2.8.1.6) low > 87
Pseudomonas sp. S08-1 0.53 OH686_23515 Zinc-binding GTPase YciC 0.60 OH686_10355 biotin synthase low > 80
Pseudomonas sp. SVBP6 0.53 COO64_RS01890 zigA zinc metallochaperone GTPase ZigA 0.61 COO64_RS22725 bioB biotin synthase BioB low > 93
Pseudomonas stutzeri RCH2 0.53 Psest_0747 Putative GTPases (G3E family) 0.59 Psest_0411 biotin synthetase low > 67
Pseudomonas segetis P6 0.53 MPMX49_00203 Putative metal chaperone YciC 0.60 MPMX49_00759 Biotin synthase low > 75
Pseudomonas syringae pv. syringae B728a 0.52 Psyr_5075 Cobalamin synthesis protein/P47K:Cobalamin synthesis protein/P47K 0.60 Psyr_4687 biotin synthase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.52 Psyr_5075 Cobalamin synthesis protein/P47K:Cobalamin synthesis protein/P47K 0.60 Psyr_4687 biotin synthase low > 86
Pseudomonas fluorescens FW300-N2E3 0.52 AO353_10110 4-hydroxytetrahydrobiopterin dehydratase 0.60 AO353_07525 biotin synthase low > 101
Pseudomonas orientalis W4I3 0.52 QF045_RS02650 zinc metallochaperone GTPase ZigA 0.59 QF045_RS00415 biotin synthase BioB low > 93
Pseudomonas aeruginosa PUPa3 0.52 DQ20_RS58405 zigA;inference=COORDINATES zinc metallochaperone GTPase ZigA 0.60 DQ20_RS36825 bioB;go_function=biotin biotin synthase BioB low > 101
Pseudomonas putida KT2440 0.52 PP_5361 47 kDa protein 0.60 PP_0362 Biotin synthase low > 96
Pseudomonas aeruginosa MRSN321 0.52 DY961_RS25980 zigA;inference=COORDINATES zinc metallochaperone GTPase ZigA 0.60 DY961_RS22505 bioB;go_function=biotin biotin synthase BioB — —
Pseudomonas sp. BP01 0.52 JOY50_RS08690 zigA zinc metallochaperone GTPase ZigA 0.60 JOY50_RS17930 bioB biotin synthase BioB low > 84
Pseudomonas aeruginosa PA14 0.52 IKLFDK_25735 zinc metallochaperone GTPase ZigA 0.60 IKLFDK_22935 biotin synthase BioB low > 98
Rahnella sp. WP5 0.52 EX31_RS15695 GTP-binding protein 0.61 EX31_RS23695 biotin synthase BioB low > 89
Serratia liquefaciens MT49 0.51 IAI46_13510 GTP-binding protein 0.60 IAI46_06525 biotin synthase BioB low > 87
Ralstonia sp. UNC404CL21Col 0.51 ABZR87_RS05105 zinc metallochaperone GTPase ZigA 0.57 ABZR87_RS06265 biotin synthase BioB 0.50 58
Cupriavidus basilensis FW507-4G11 0.50 RR42_RS01025 GTPase 0.55 RR42_RS00940 biotin synthase low > 128
Ralstonia solanacearum IBSBF1503 0.50 RALBFv3_RS09640 GTP-binding protein 0.57 RALBFv3_RS10465 biotin synthase BioB low > 76
Ralstonia solanacearum UW163 0.50 UW163_RS03940 GTP-binding protein 0.57 UW163_RS03115 biotin synthase BioB — —
Ralstonia solanacearum GMI1000 0.50 RS_RS00225 GTP-binding protein 0.58 RS_RS01305 biotin synthase low > 80
Xanthomonas campestris pv. campestris strain 8004 0.50 Xcc-8004.333.1 Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family 0.56 Xcc-8004.505.1 Biotin synthase (EC 2.8.1.6) low > 74
Ralstonia solanacearum PSI07 0.50 RPSI07_RS23725 GTP-binding protein 0.58 RPSI07_RS22850 biotin synthase BioB 0.46 80
Burkholderia phytofirmans PsJN 0.50 BPHYT_RS19585 cobalamin biosynthesis protein CobW 0.56 BPHYT_RS02150 biotin synthase low > 109
Echinicola vietnamensis KMM 6221, DSM 17526 0.49 Echvi_2702 Putative GTPases (G3E family) 0.50 Echvi_2566 biotin synthetase low > 79
Dickeya dadantii 3937 0.49 DDA3937_RS12435 GTP-binding protein 0.61 DDA3937_RS08510 biotin synthase BioB low > 74
Paraburkholderia graminis OAS925 0.45 ABIE53_000293 G3E family GTPase 0.56 ABIE53_000577 biotin synthase low > 113
Paraburkholderia sabiae LMG 24235 0.36 QEN71_RS29500 GTP-binding protein 0.57 QEN71_RS01085 biotin synthase BioB — —
Phocaeicola vulgatus CL09T03C04 0.30 HMPREF1058_RS13270 GTP-binding protein 0.25 HMPREF1058_RS17950 biotin synthase BioB low > 67
Escherichia coli Nissle 1917 0.15 ECOLIN_RS05820 GTP-binding protein 0.60 ECOLIN_RS04130 biotin synthase BioB — —
Escherichia fergusonii Becca 0.15 EFB2_02962 Putative metal chaperone YciC 0.60 EFB2_03330 Biotin synthase low > 86
Mycobacterium tuberculosis H37Rv 0.11 Rv0106 Conserved hypothetical protein 0.28 Rv1589 Probable biotin synthetase BioB low > 58

Not shown: 5 genomes with orthologs for Atu3181 only; 57 genomes with orthologs for Atu3997 only