Conservation of cofitness between Atu0035 and Atu3469 in Agrobacterium fabrum C58

52 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Agrobacterium fabrum C58 1.0 Atu0035 phosphoenolpyruvate carboxykinase 1.0 Atu3469 phosphoglyceromutase 0.58 6
Rhodopseudomonas palustris CGA009 0.69 TX73_001865 phosphoenolpyruvate carboxykinase 0.53 TX73_001765 2,3-bisphosphoglycerate-independent phosphoglycerate mutase
Bosea sp. OAE506 0.67 ABIE41_RS02665 phosphoenolpyruvate carboxykinase 0.51 ABIE41_RS09590 2,3-bisphosphoglycerate-independent phosphoglycerate mutase
Dinoroseobacter shibae DFL-12 0.64 Dshi_0213 Phosphoenolpyruvate carboxykinase (ATP) (RefSeq) 0.67 Dshi_0089 phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent (RefSeq) 0.56 32
Phaeobacter inhibens DSM 17395 0.63 PGA1_c01140 phosphoenolpyruvate carboxykinase 0.68 PGA1_c02770 2,3-bisphosphoglycerate-independent phosphoglycerate mutase GpmI
Pontibacter actiniarum KMM 6156, DSM 19842 0.51 CA264_05270 phosphoenolpyruvate carboxykinase (ATP) 0.39 CA264_16950 2,3-bisphosphoglycerate-independent phosphoglycerate mutase
Echinicola vietnamensis KMM 6221, DSM 17526 0.49 Echvi_2957 phosphoenolpyruvate carboxykinase (ATP) 0.42 Echvi_0844 2,3-bisphosphoglycerate-independent phosphoglycerate mutase
Shewanella amazonensis SB2B 0.47 Sama_0165 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) (from data) 0.45 Sama_0060 phosphoglyceromutase (RefSeq)
Pedobacter sp. GW460-11-11-14-LB5 0.47 CA265_RS23490 phosphoenolpyruvate carboxykinase (ATP) 0.39 CA265_RS14540 phosphoglycerate mutase (2,3-diphosphoglycerate-independent)
Shewanella loihica PV-4 0.46 Shew_3623 phosphoenolpyruvate carboxykinase (RefSeq) 0.45 Shew_3806 phosphoglyceromutase (RefSeq)
Shewanella oneidensis MR-1 0.45 SO0162 pckA phosphoenolpyruvate carboxykinase (ATP) (NCBI ptt file) 0.44 SO0049 gpmA phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent (NCBI ptt file)
Shewanella sp. ANA-3 0.45 Shewana3_0147 phosphoenolpyruvate carboxykinase (RefSeq) 0.44 Shewana3_0051 phosphoglyceromutase (RefSeq)
Kangiella aquimarina DSM 16071 0.45 B158DRAFT_2395 phosphoenolpyruvate carboxykinase (ATP) 0.47 B158DRAFT_0706 phosphoglycerate mutase (EC 5.4.2.1)
Escherichia coli ECRC62 0.44 BNILDI_02685 pckA phosphoenolpyruvate carboxykinase (ATP) 0.46 BNILDI_03900 gpmM 2,3-bisphosphoglycerate-independent phosphoglycerate mutase
Escherichia coli ECOR27 0.44 NOLOHH_08835 pckA phosphoenolpyruvate carboxykinase (ATP) 0.46 NOLOHH_07615 gpmM 2,3-bisphosphoglycerate-independent phosphoglycerate mutase low > 57
Escherichia coli BW25113 0.44 b3403 pck phosphoenolpyruvate carboxykinase (NCBI) 0.46 b3612 gpmI phosphoglyceromutase (NCBI) low > 76
Escherichia fergusonii Becca 0.44 EFB2_00425 Phosphoenolpyruvate carboxykinase (ATP) 0.46 EFB2_00198 2,3-bisphosphoglycerate-independent phosphoglycerate mutase low > 86
Escherichia coli BL21 0.44 ECD_03255 phosphoenolpyruvate carboxykinase [ATP] 0.46 ECD_03470 phosphoglycero mutase III, cofactor-independent low > 60
Escherichia coli HS(pFamp)R (ATCC 700891) 0.44 OHPLBJKB_00300 Phosphoenolpyruvate carboxykinase (ATP) 0.46 OHPLBJKB_00087 2,3-bisphosphoglycerate-independent phosphoglycerate mutase low > 73
Escherichia coli ECOR38 0.44 HEPCGN_15865 pckA phosphoenolpyruvate carboxykinase (ATP) 0.46 HEPCGN_14575 gpmM 2,3-bisphosphoglycerate-independent phosphoglycerate mutase low > 85
Escherichia coli Nissle 1917 0.44 ECOLIN_RS19435 phosphoenolpyruvate carboxykinase (ATP) 0.46 ECOLIN_RS20615 2,3-bisphosphoglycerate-independent phosphoglycerate mutase low > 52
Serratia liquefaciens MT49 0.44 IAI46_10700 phosphoenolpyruvate carboxykinase (ATP) 0.44 IAI46_24710 2,3-bisphosphoglycerate-independent phosphoglycerate mutase low > 86
Escherichia coli ECRC99 0.44 KEDOAH_11095 pckA phosphoenolpyruvate carboxykinase (ATP) 0.46 KEDOAH_12415 gpmM 2,3-bisphosphoglycerate-independent phosphoglycerate mutase
Escherichia coli ECRC101 0.44 MCAODC_07575 pckA phosphoenolpyruvate carboxykinase (ATP) 0.46 MCAODC_06245 gpmM 2,3-bisphosphoglycerate-independent phosphoglycerate mutase
Escherichia coli ECRC98 0.44 JDDGAC_20675 pckA phosphoenolpyruvate carboxykinase (ATP) 0.46 JDDGAC_19360 gpmM 2,3-bisphosphoglycerate-independent phosphoglycerate mutase
Escherichia coli ECRC102 0.44 NIAGMN_14815 pckA phosphoenolpyruvate carboxykinase (ATP) 0.46 NIAGMN_13495 gpmM 2,3-bisphosphoglycerate-independent phosphoglycerate mutase
Escherichia coli ECRC101 0.44 OKFHMN_17045 pckA phosphoenolpyruvate carboxykinase (ATP) 0.46 OKFHMN_15735 gpmM 2,3-bisphosphoglycerate-independent phosphoglycerate mutase
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.44 GFF615 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) 0.46 GFF398 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC 5.4.2.1) low > 78
Rahnella sp. WP5 0.43 EX31_RS04780 phosphoenolpyruvate carboxykinase (ATP) 0.45 EX31_RS14360 2,3-bisphosphoglycerate-independent phosphoglycerate mutase low > 89
Enterobacter asburiae PDN3 0.43 EX28DRAFT_4140 phosphoenolpyruvate carboxykinase (ATP) 0.46 EX28DRAFT_3863 phosphoglycerate mutase (EC 5.4.2.1) low > 76
Enterobacter sp. TBS_079 0.43 MPMX20_04290 Phosphoenolpyruvate carboxykinase (ATP) 0.46 MPMX20_00121 2,3-bisphosphoglycerate-independent phosphoglycerate mutase low > 85
Klebsiella michiganensis M5al 0.43 BWI76_RS26155 phosphoenolpyruvate carboxykinase (ATP) 0.46 BWI76_RS27230 2,3-bisphosphoglycerate-independent phosphoglycerate mutase low > 92
Vibrio cholerae E7946 ATCC 55056 0.42 CSW01_13810 phosphoenolpyruvate carboxykinase (ATP) 0.43 CSW01_01740 2,3-bisphosphoglycerate-independent phosphoglycerate mutase
Pseudomonas stutzeri RCH2 0.41 Psest_3988 phosphoenolpyruvate carboxykinase (ATP) 0.42 Psest_0162 2,3-bisphosphoglycerate-independent phosphoglycerate mutase
Pseudomonas sp. S08-1 0.41 OH686_11060 phosphoenolpyruvate carboxykinase (ATP) 0.43 OH686_14655 phosphoglycerate mutase (2,3-diphosphoglycerate-independent)
Phocaeicola dorei CL03T12C01 0.41 ABI39_RS06685 phosphoenolpyruvate carboxykinase (ATP) 0.38 ABI39_RS04505 2,3-bisphosphoglycerate-independent phosphoglycerate mutase
Phocaeicola vulgatus CL09T03C04 0.41 HMPREF1058_RS10065 phosphoenolpyruvate carboxykinase (ATP) 0.38 HMPREF1058_RS12285 2,3-bisphosphoglycerate-independent phosphoglycerate mutase
Parabacteroides merdae CL09T00C40 0.40 HMPREF1078_RS07235 phosphoenolpyruvate carboxykinase (ATP) 0.39 HMPREF1078_RS04580 2,3-bisphosphoglycerate-independent phosphoglycerate mutase
Marinobacter adhaerens HP15 0.40 HP15_3498 phosphoenolpyruvate carboxykinase (ATP) 0.44 HP15_3005 phosphoglyceromutase
Bacteroides thetaiotaomicron VPI-5482 0.39 BT2790 phosphoenolpyruvate carboxykinase [ATP] (NCBI ptt file) 0.39 BT3419 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (NCBI ptt file)
Bacteroides stercoris CC31F 0.39 HMPREF1181_RS01170 phosphoenolpyruvate carboxykinase (ATP) 0.39 HMPREF1181_RS02685 2,3-bisphosphoglycerate-independent phosphoglycerate mutase
Pseudomonas sp. RS175 0.39 PFR28_04874 Phosphoenolpyruvate carboxykinase (ATP) 0.43 PFR28_04938 2,3-bisphosphoglycerate-independent phosphoglycerate mutase
Pseudomonas fluorescens FW300-N1B4 0.39 Pf1N1B4_1779 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) 0.43 Pf1N1B4_1617 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC 5.4.2.1)
Bacteroides ovatus ATCC 8483 0.39 BACOVA_02011 phosphoenolpyruvate carboxykinase (ATP) 0.38 BACOVA_01888 2,3-bisphosphoglycerate-independent phosphoglycerate mutase
Pseudomonas fluorescens FW300-N2E3 0.39 AO353_11775 phosphoenolpyruvate carboxykinase [ATP] 0.44 AO353_12115 2,3-bisphosphoglycerate-independent phosphoglycerate mutase low > 101
Pseudomonas fluorescens GW456-L13 0.38 PfGW456L13_420 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) 0.44 PfGW456L13_353 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC 5.4.2.1)
Pseudomonas syringae pv. syringae B728a 0.38 Psyr_0168 Phosphoenolpyruvate carboxykinase (ATP) 0.43 Psyr_4885 phosphoglycerate mutase
Pseudomonas syringae pv. syringae B728a ΔmexB 0.38 Psyr_0168 Phosphoenolpyruvate carboxykinase (ATP) 0.43 Psyr_4885 phosphoglycerate mutase
Pseudomonas fluorescens FW300-N2E2 0.38 Pf6N2E2_3899 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) 0.42 Pf6N2E2_3832 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC 5.4.2.1)
Pseudomonas simiae WCS417 0.38 PS417_01210 hypothetical protein 0.44 PS417_01605 phosphoglycerate mutase low > 88
Pseudomonas fluorescens FW300-N2C3 0.38 AO356_10140 phosphoenolpyruvate carboxykinase [ATP] 0.43 AO356_09770 2,3-bisphosphoglycerate-independent phosphoglycerate mutase
Pseudomonas fluorescens SBW25 0.38 PFLU_RS01320 phosphoenolpyruvate carboxykinase 0.44 PFLU_RS01655 2,3-bisphosphoglycerate-independent phosphoglycerate mutase
Pseudomonas fluorescens SBW25-INTG 0.38 PFLU_RS01320 phosphoenolpyruvate carboxykinase 0.44 PFLU_RS01655 2,3-bisphosphoglycerate-independent phosphoglycerate mutase

Not shown: 11 genomes with orthologs for Atu0035 only; 12 genomes with orthologs for Atu3469 only